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Schistosoma mansoni
cluster # 10939 cluster # 10939       Sequences # 26       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10939#0 length = 1487 sequences # 10  
consensus_10939#1 length = 1434 sequences # 12  
consensus_10939#2 length = 496 sequences # 1  
consensus_10939#3 length = 454 sequences # 1  
consensus_10939#4 length = 444 sequences # 1  
consensus_10939#5 length = 247 sequences # 1  

consensusID : consensus_10939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1487
fasta sequence
                              [CTATTTGGTTTGTTCATTCAACTGTTCTCATCCCCTCTTGAATCGGTAAAAAATAACTACAAAATATATATTGATGAACAACGATTATGATGATCGTGATGACGGTGGATAATCACACTGGATAATGCCTTATTCTTCTTGCTTGTACTACTACTACCACTACTTATACTACTGCCATAAATCTCATTTATGTACAACTGCCTATTTTCTGGACTATGTGCAAACGGTATGGAATGTATGGTCAATGTTCGTGATATGCCCTAAAATATTCCCGGATTCTCCTAAATTTTCGGTATCTTTTCGCCTAAATGATCTTTATCAAGGTGGAATTATTAACATCGTGTCGAGATGTTGCTACTGCTTTACGTAGTGTGTTTCTTTCATCCGGTAAAGTACAAGGGCGTCCGTCCCTAGATCCTATTTATGATGAAGTTCGATCAAACGCTCAGGTTGTTATTTCTAATGTTGGTCAGCTCCTTCAAACACTAAAGTCAGTAGAAGAAGATGAACGCCGAGGAATTCGATCTCTTGAGCTAGCTGCTAATTATTGTCGTGAACAAGCTAAACTCCTTCCATCATCTAAGGATCCAGAAGGGTTGCTTACACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAGTGGTTCTTCTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTGGACCTGTTCAGTCAGCTGTTTCAAAAGCAATCTTAGCGAATAATACACAAATTCATCGTGACATTGTCCAGACATCATCAGCAACACGAGATGCAGTCGCTGATTTAGTTGCAGCTGCCAAGTGTTTACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGGAATTGGCT-GAAGAGTTCGCTGCTTTATTGGATGCTCTTAAAAATGGGTTATACATTCCTAGGAAATCAGGTCCAGAAAATGTTTCGAATATAGCTCGTCGTATTGCTGATATTTCACACAGTTTGATCAATTTAGTTGACAGTCTTAGAGAGGGACCACGACTGATTATGTATTTTCGTGCAAGCAGTCCGGAATGGCGTGATGTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTCAAAATCACACAAAAGTATTTTCATTCGTCCCACATGTTACCCTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCCCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGAACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGTCGGTGAAGGCAGGGTACAG]

[+] EMBL CD096166             [CTATTTGGTTTGTTCATTCAACTGTTCTCATCCCCTCTTGAATCGGTAAAAAATAACTACAAAATATATATTGATGAACAACGATTATGATGATCGTGATGACGGTGGATAATCACACTGGATAATGCCTTATTCTTCTTGCTTGTACTACTACTACCACTACTTATACTACTGCCATAAATCTCATTTATGTACAACTGCCTATTTTCTGGACTATGTGCAAACGGTATGGAATGTATGGTCAATGTTCGTGATATGCCCTAAAATATTCCCGGATTCTCCTAAATTTTCGGTATCTTTTCGCCTAAATGATCTTTATCAAGGTGGAATTATTAACATCGTGTCGAGATGTTGCTACTGCTTTACGTAGTGTGTTTCTTTCATCCGGGTAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD096295             [                                                                                                                                                                                                                                                                               CCGGATTCTCCTAAATTTCGGGTATCTNNTCGCCTAAATGATCTTTATCAAGGTGGAATTATTACCATCGTGTCGAGATGTTGCTACTGCTNTACGTAGTGTGTTTCTTTCATCCGGTAAAGTACAAGGGCGTCCGTCCCTAGATCCTATTTATGATGAAGTTCGATCAAACGCTCAGGTTGTTATTTCTAATGTTGGTCAGCTCCTTCAAACACTAAAGTCAGTAGAAGAAGATGAACGCCGAGGAATTCGATCTCTTGAGCTAGCTGCTAATTATTGTCGTGAACAAGCTAAACTCCTTCCATCATCTAAGGATCCAGAAGGGTTGCTTACACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAGTGGTTCTTCTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTata                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD152790             [                                                                                                                                                                                                                                                                                                                                            TTAACATCGTGTCGAGATGTTGCTACTGCTTTACTTACAGCGTTTCTTTCATCCGGTAAAGTACAAGGGCGTCCGTCCCTAGATCCTATTTATGATGAAGTTCGATCAAACGCTCAGGTTGTTATTTCTAATGTTGGTCAGCTCCTTCAAACACTAAAGTCAGTACAAGAAGATGAACGCCGAGGAATTCGATCTCTTGAGCTAGCTGCTAATTATTGTCGTGAACAAGCTAAACTCCTTCCATCATCTAAGGATCCAGAAGGGTTGCTTACACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD152959             [                                                                                                                                                                                                                                                                                                                                             TAACATCGTGTCGAGATGTTGCTACTGCTTTACGTAGTGTGTTTCTTTCATCCGGTAAAGTACAAGGGCGTCCGTCCCTAGATCCTATTTATGATGAAGTTCGATCAAACGCTCAGGTTGTTATTTCTAATGTTGGTCAGCTCCTTCAAACACTAAAGTCAGTAGAAGAAGATGAACGCCGAGGAATTCGATCTCTTGAGCTAGCTGCTAATTATTGTCGTGAACAAGCTAAACTCCTTCCATCATCTAAGGATCCAGAAGGGTTGCTTACACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAGTGGTTCTTCTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTGGACCTGTTCAGTCAGCTGTTTCAAAAGCAATCTTAGCGAATAATACACAAATTCATCGTGACATTGTCCAGACATCATCAGCAACACGAGATGCAGTCGCTGATTTAGTTGCAGCTGCCAAGTGTTTACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGGAATTGGCT GAAGAGTTCGCTGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD201800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTCTTGAGCTAGCTGCTAATTATTGTCGTGAACAAGCTAAACTCCATCCATCATCTAAGGATCCAGAAGGGTTGCTTACACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAGTGGTTCTTCTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTGGACCTGTTCAGTCAGCTGTTTCAAAAGCAATCTTAGCGAATAATACACAAATTCATCGTGACATTGTCCAGACATCATCAGCAACACGAGATGCAGTCGCTGATTTAGTTGCAGCTGCCAAGTGTTTACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGGAATTGGCT GAAGAGTTCGCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD193968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tctacgCACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAGTGGTTCTTCTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTGGACCTGTTCAGTCAGCTGTTTCAAAAGCAATCTTAGCGAATAATACACAAATTCATCGTGACATTGTCCAGACATCATCAGCAACACGAGATGCAGTCGCTGATTTAGTTGCAGCTGCCAAGTGTTTACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGGAATTGGCTNGAAGAG TCGCTGCTTTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD114557             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTAGTGGTTCTTCTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTGGACCTGTTCAGTCAGCTGTTTCAAAAGCAATCTTAGCGAATAATACACAAATTCATCGTGACATTGTCCAGACATCATCAGCAACACGAGATGCAGTCGCTGATTTAGTTGCAGCTGCCAAGTGTTTACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGGAATTGGCT GAAGAGTTCGCTGCTTTATTGGATGCTCTTAAAAATGGGTTATACATTCCTAGGAAATCAGGTCCAGAAAATGTTTCGAATATAGCTCGTCGTATTGCTGATATTTCACACAGTTTGATCAATTTAGTTGACAGTCTTAGAGAGGGACCACGACTGATTATGTATTTTCGTGCAAGCAGTCCGGAATGGCGTGATGTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTCANAATCACACAAAAGTATTTTCATTCGTCCCACATGTTAC                                                                                                                                                                                                                                                                           ]
[-] EMBL CD168559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAGCTGCCAAGTGTTTACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGGAATTGGCT GAAGAGTTCGCTGCTTTATTGGATGCTCTTAAAAATGGGTTATACATTCCTAGGAAATCAGGTCCAGAAAATGTTTCGAATATAGCTCGTCGTATTGCTGATATTTCACACAGTTTGATCAATTTAGTTGACAGTCTTAGAGAGGGACCACGACTGATTATGTATTTTCGTGCAAGCAGTCCGGAATGGCGTGATGTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTCAAAATCACACAAAAGTATTTTCATTCGTCCCACATGTTACCCTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCCCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGAACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGTCGGTGAAGGCAGGGTACAG]
[-] EMBL CD141506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AATTTAGTTGACAGTCTTAGAGAGGGACCACGACTGATTATGTATTTTCGTGCAAGCAGTCCGGAATGGCGTGATGTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTCAAAATCACACAAAAGTATTTTCATTCGTCC                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD180414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATTATGTATTTTCGTGCAAGCAGTCCGGAATGGCGTGATGTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTCAAAATCACACAAAAGTATTTTCATTCGTCCCACATGTTACCCTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCTCGGCGGACAATAAATTAGCT                                                                                                                                          ]


>consensus_10939#0 CTATTTGGTTTGTTCATTCAACTGTTCTCATCCCCTCTTGAATCGGTAAAAAATAACTAC AAAATATATATTGATGAACAACGATTATGATGATCGTGATGACGGTGGATAATCACACTG GATAATGCCTTATTCTTCTTGCTTGTACTACTACTACCACTACTTATACTACTGCCATAA ATCTCATTTATGTACAACTGCCTATTTTCTGGACTATGTGCAAACGGTATGGAATGTATG GTCAATGTTCGTGATATGCCCTAAAATATTCCCGGATTCTCCTAAATTTTCGGTATCTTT TCGCCTAAATGATCTTTATCAAGGTGGAATTATTAACATCGTGTCGAGATGTTGCTACTG CTTTACGTAGTGTGTTTCTTTCATCCGGTAAAGTACAAGGGCGTCCGTCCCTAGATCCTA TTTATGATGAAGTTCGATCAAACGCTCAGGTTGTTATTTCTAATGTTGGTCAGCTCCTTC AAACACTAAAGTCAGTAGAAGAAGATGAACGCCGAGGAATTCGATCTCTTGAGCTAGCTG CTAATTATTGTCGTGAACAAGCTAAACTCCTTCCATCATCTAAGGATCCAGAAGGGTTGC TTACACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAGTGGTTCTT CTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTGGACCTG TTCAGTCAGCTGTTTCAAAAGCAATCTTAGCGAATAATACACAAATTCATCGTGACATTG TCCAGACATCATCAGCAACACGAGATGCAGTCGCTGATTTAGTTGCAGCTGCCAAGTGTT TACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGG AATTGGCTGAAGAGTTCGCTGCTTTATTGGATGCTCTTAAAAATGGGTTATACATTCCTA GGAAATCAGGTCCAGAAAATGTTTCGAATATAGCTCGTCGTATTGCTGATATTTCACACA GTTTGATCAATTTAGTTGACAGTCTTAGAGAGGGACCACGACTGATTATGTATTTTCGTG CAAGCAGTCCGGAATGGCGTGATGTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATC ATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTCAAAATCACACAAAAGTATTT TCATTCGTCCCACATGTTACCCTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACTA TGAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGG AAAAATGCCCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCG CTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGAACCCCCAAGCA ATGCTGTCGACAGAGCTCGGACGGCAGTCGGTGAAGGCAGGGTACAG



consensusID : consensus_10939#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1434
fasta sequence
                              [TTCGGCACGAGGGCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGATGG-AAAAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTACCATCCATAACCTCGCAAAAATTGGAGAATAACGCCGGGGAGTTATCAGGAGGATTAATTTTATCACGCGAAAGACTTCTGGCTGCTGTGCGTCAAGTGGCAACTGCAGGAGCTCAGTTACTCTTAGCAGCTAAATTAAGAAAAGAAGCTTTAATGTCTGCTGATATTCGAAAGTTGAAAACTGCAGGACAAGCTGTCAAAGAGTCAACAGACTTACTTGCTGAAACTGTTCAACGAGGTGACATAGTTTCGAATAGTTCAACTTCACCACAAATAGAAATCACTTGGCCAACTTACACAAATCAAGCGTTGTTACAGGGTATCCATACAAAAGCACGAATTCAATCTCAACAAATGGAATTAGAAGCATTAGAATCACGTCTTGCTAGTTTAAAACAATCATAATCATTATCTATATAGATAAATTTACATTGTACAGTACTATTAAATAATCATTTCAACTGGAATAAATTATTTCTGTTTATTTATTGATTCTTTGTTAGTAATATATTCCAGTTGTGTTTTATCTTTTTCGCAAATTTCTTTTCATTTTCGTTACTTTAATTCAGATTAAAAGAAACTTATACTATTTATACATACATATACATGTATGTGTTTGCATGCTTCACTCCATGTGTGTGTATGTGTATGTATGTATGTATACCTACCTACCAACATACGCTTTTTCATTGTTTTTTTTTAATGGTATGCTTTTTAATTGTCAATTATTCATACATTTCATTTTTTCTTTCTTATTTATATTCTTAATCCCAGTGATTAAGATGGGAACAAGTTGATTATGATCATTGATAATACTTTATTTTATTGAATTTAACCTACAGATATCTGCATGATAATATTCATTTAAATGCATGTAATATACACCGCTTTTGAGATTATATATTATAGAGTT-GTTAATTATTATTGGAGTATTCGCCTTATTGGTTTTTTTTTCAATTCCTTTGTTTTTATGATGCTTACTTGTTTTGTTTTGGCGCCGTCATTTTAAAGCCTTATTCTTTGAATTATTTATTACATTTTCT-GGATAGTATTAT-GGTAC-TTTGATATAATAAA]

[+] EMBL CD082920             [TTCGGCACGAGGGCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGG AAAAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTACCATCCATAACCTCGCAAAAATTGGAGAATAACGCCGGGGAGTTATCAGGAGGATTAATTTTATCACGCGAAAGACTTCTGGCTGCTGTGCGTCAAGTGGCAACTGCAGGAGCTCAGTTACTCTTAGCAGCTAAATTAAGAAAAGAAGCTTTAATGTCTGCTGATATTCGAAAGTTGAAAACTGCAGGACAAGCTGTCAAAGAGTCAACAGACTTACTTGCTGAAACTGTTCAACGAGGTGACATAGTTTCGAATAGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD181479             [                                         GAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGATGG AAAAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD059620             [                                                                                         cTCATCGNTGGAAAAAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCTTGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD180495             [                                                                                                                                                                                                                                                                                                                                                                                TAACCTCGCAAAAATTGGAGAATAACGCCGGGGAGTTATCAGGAGGATTAATTTTATCACGCGAAAGACTTCTGGCTGCTGTGCGTCAAGTGGCAACTGCAGGAGCTCAGTTACTCTTAGCAGCTAAATTAAGAAAAGAAGCTTTAATGTCTGCTGATATTCGAAAGTTGAAAACTGCAGGACAAGCTGTCAAAGAGTCAACAGACTTACTTGCTGAAACTGTTCAACGAGGTGACATAGTTCCGAATAGTTCAACTTCACCACAAATAGAAATCACTTGGCCAACTTACACAAATCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD194626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGTTACTCTTAGCAGCTAAATTAAGAAAAGAAGCTTTAATATCTGCTGATATTCGAAAGTTGAAAACTGCAGGACAAGCTGTCAAAGAGTCAACAGACTTACTTGCTGAAACTGTTCAACGAGGTGACATAGTTTCGAATAGTTCAACTTCACCACAAATAGAAATCACTTGGCCAACTTACACAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD169218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTACTTGCTGAAACTGTTCAACGAGGTGACATAGTTTCGAATAGTTCAACTTCACCACAAATAGAAATCACTTGGCCAACTTACACAAATCAAGCGTTGTTACAGGGTATCCATACAAAAGCACAAATTCAATCTCAACAAATGGAATTAGAAGCATTAGAATCACGTCTTGCTAGTTTAAAACAATCATAATCATTATCTATATAGATAAATTTACATTGTACAGTACTATTAAATAATCATTTCAACTGGAATAAATTATTTCTGTTTATTTATTGATTCTTTGTTAGTAATATATTCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD169628             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTACTTGCTGAAACTGTTCAACGAGGTGACATAGTTTCGAATAGTTCAACTTCACCACAAATAGAAGTCACTTGGCCAACTTACACAAATCAAGCGTTGTTACAGGGTATCCATACAAAAGCACGAATTCAATCTCAACAAATGGAATTAGAAGCATTAGAATCACGTCTTGCTAGTTTAAAACAATCATAATCATTATCTATATAGATAAATTTACATTGTACAGTACTATTAAATAATCATTTCAACTGGAATAAATTATTTCTGTTTATTTATTGATTCTTTGTTAGTAATATATTCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD068659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTG AAC G TCAACGAGGTGACATAGTTTCAAATAGTTCAACTTCACCACAAATAGAAATCAC TGGCCAACTTACACAAATCAAGCG TGTTACAGGGTATCCATACAAAAGCACGAATTCAATCTCAACAAATGGAATTAGAAGCATTAGAATCACGTCTTGCTAGTTTAAAACAATCATAATCATTATCTATATAGATAAATTTACATTGTACAGTACTATTAAATAATCATTTCAACTGGAATAAATTATTTCTGTTTATTTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD136769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTATATAGATAAATTTACATTGTACAGTACTATTAAATAATCATTTCAACTGGAATAAATTATTTCTGTTTATTTATTGATTCTTTGTTAGTAATATATTCCAGTTGTGTTTTATCTTTTTCGCAAATTTCTTTTCATTTTCGTTACTTTAATTCAGATTAAAAGAAACTTATACTATTTATACATACATATACATGTATGTGTTTGCATGCTTCACTCCATGTGTGTGTATGTGTATGTATGTATGTATACCTACCTACCAACATACGCTTTTTCATTGTTTTTTTTTAATGGTATGCTTTTTAATTGTCAATTATTCATACATTTCATTTTTTCTTTCTTATTTATATTCTTAATCCCAGTGATTAAGATGGGAACAAGTTGATTATGATCATTGATAATACTTTATTTTATTGAATTTAACCTACAGATATCTGCATGATAATATTCATTTAAATGCATGTAATATACACCGCTTTTGAGATTATATATTATAGAGTT GTTAATTATTATTGGAGTATTCGCCTTATTGGTTTTTTTTTCAATTC                                                                                                                     ]
[-] EMBL CD076504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATTGATTCTTTGTTAGTAATATATTCCAGTTGTGTTTTATCTTTTTCGCAAATTTCTTTTCATTTTCGTTACTTTAATTCAGATTAAAAGAAACTTATACTATTTATACATACATATACATGTATGTGTTTGCATGCTTCACTCCATGTGTGTGTATGTGTATGTATGTATGTATACC                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD076503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTTTAATTGTCAATTATTCATACATTTCATTTTTTCTTTCTTATTTATATTCTTAATCCCAGTGATTAAGATGGGAACAAGTTGATTATGATCATTGATAATACTTTATTTTATTGAATTTAACCTACAGATATCTGCATGATAATATTCATTTAAATGCATGTAATATACCCCGCTTTTGAGATTATATATTATAGAGTT GTTAATTATTATTGGAGTATTCGCCTTATTGGTTTTTTTTTCAATTCCTTTGTTTTTATGATGCTTACTTGTTTTGTTTTGGCGCCGTCATTTTAAAGCCTTATTCTTTGAATTATTTATTACATTTTCT GGATAGTATTAT GGTAC TTTGATATAATAAA]
[+] EMBL AI395872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGTTGATTATGABCATTGATAATACTTTATTTTATTGAATTTAACCTACAGATATCTGCATGATAATATTCATTTAAATGCATGTAATATACACCGCTTTTGAGATTATATATTATAGAGTTGGTTAATTATTATTGGAGTATTCGCCTTATTGGTTTTTTTTTCAATTCC TTGGTTTTATGATGCTTACCTGGTTTGGTTTGGCGCCGTCATTTTAAAGCCTTAATCTTTGAATTATTTATTACATTTTCTCGGATAGTATTATAGGTACACTTGAGATAAT   ]


>consensus_10939#1 TTCGGCACGAGGGCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCAGAATGT CGAATTGTCGATGCTATTAATCAGCTTAATTCATCGATGGAAAAATGCTCGGCGGACAAT AAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTT ATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGG ACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTT AATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTA CCATCCATAACCTCGCAAAAATTGGAGAATAACGCCGGGGAGTTATCAGGAGGATTAATT TTATCACGCGAAAGACTTCTGGCTGCTGTGCGTCAAGTGGCAACTGCAGGAGCTCAGTTA CTCTTAGCAGCTAAATTAAGAAAAGAAGCTTTAATGTCTGCTGATATTCGAAAGTTGAAA ACTGCAGGACAAGCTGTCAAAGAGTCAACAGACTTACTTGCTGAAACTGTTCAACGAGGT GACATAGTTTCGAATAGTTCAACTTCACCACAAATAGAAATCACTTGGCCAACTTACACA AATCAAGCGTTGTTACAGGGTATCCATACAAAAGCACGAATTCAATCTCAACAAATGGAA TTAGAAGCATTAGAATCACGTCTTGCTAGTTTAAAACAATCATAATCATTATCTATATAG ATAAATTTACATTGTACAGTACTATTAAATAATCATTTCAACTGGAATAAATTATTTCTG TTTATTTATTGATTCTTTGTTAGTAATATATTCCAGTTGTGTTTTATCTTTTTCGCAAAT TTCTTTTCATTTTCGTTACTTTAATTCAGATTAAAAGAAACTTATACTATTTATACATAC ATATACATGTATGTGTTTGCATGCTTCACTCCATGTGTGTGTATGTGTATGTATGTATGT ATACCTACCTACCAACATACGCTTTTTCATTGTTTTTTTTTAATGGTATGCTTTTTAATT GTCAATTATTCATACATTTCATTTTTTCTTTCTTATTTATATTCTTAATCCCAGTGATTA AGATGGGAACAAGTTGATTATGATCATTGATAATACTTTATTTTATTGAATTTAACCTAC AGATATCTGCATGATAATATTCATTTAAATGCATGTAATATACACCGCTTTTGAGATTAT ATATTATAGAGTTGTTAATTATTATTGGAGTATTCGCCTTATTGGTTTTTTTTTCAATTC CTTTGTTTTTATGATGCTTACTTGTTTTGTTTTGGCGCCGTCATTTTAAAGCCTTATTCT TTGAATTATTTATTACATTTTCTGGATAGTATTATGGTACTTTGATATAATAAA



consensusID : consensus_10939#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence
                              [GCTTCTTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCGGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCTCGGCGGACAATAAATTAGCCCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTACCATCCATAACCTCGCAAAAATTGGAGAATGACGCCGGGGAGTTATCAGGAGGATTAATTTTATCACGCGAAAGACTTCTGGCTGCTGTGCGTCAAGTGGCAACTGCAGGAGCTCAGTTACTCTTAGCAGCT]

[+] EMBL CD190509             [GCTTCTTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCGGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCTCGGCGGACAATAAATTAGCCCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTACCATCCATAACCTCGCAAAAATTGGAGAATGACGCCGGGGAGTTATCAGGAGGATTAATTTTATCACGCGAAAGACTTCTGGCTGCTGTGCGTCAAGTGGCAACTGCAGGAGCTCAGTTACTCTTAGCAGCT]


>consensus_10939#2 GCTTCTTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACTATGAACGATGAAGCGGA ATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCTCGGCGGA CAATAAATTAGCCCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAA TCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGC TCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGA ACTTAATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAAC AGTACCATCCATAACCTCGCAAAAATTGGAGAATGACGCCGGGGAGTTATCAGGAGGATT AATTTTATCACGCGAAAGACTTCTGGCTGCTGTGCGTCAAGTGGCAACTGCAGGAGCTCA GTTACTCTTAGCAGCT



consensusID : consensus_10939#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 454
fasta sequence
                              [GAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTATTTCATCGTTGGAAAAATGCTCGGCGGACAATAAATGAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAACGTATCGCTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTTCAAATCACACAAAAGTATTTTCATTCGTCCCACATNGTACCCNTCTCAAATATCGTCTGAGCAAACACTGAGCAACCTATGAACGATNGAGCAGAATGTCGAATTGTCG]

[+] EMBL CD181523             [GAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTATTTCATCGTTGGAAAAATGCTCGGCGGACAATAAATGAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAACGTATCGCTTGCTGAAAAGTTCATCGGGCGTCATGTAGCTTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTTCAAATCACACAAAAGTATTTTCATTCGTCCCACATNGTACCCNTCTCAAATATCGTCTGAGCAAACACTGAGCAACCTATGAACGATNGAGCAGAATGTCGAATTGTCG]


>consensus_10939#3 GAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTATTTCATCGTTGGA AAAATGCTCGGCGGACAATAAATGAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGC TGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAA TGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGC TCTTTGGCGTACTGAACTTAACGTATCGCTTGCTGAAAAGTTCATCGGGCGTCATGTAGC TTATCATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTTCAAATCACACAAAAG TATTTTCATTCGTCCCACATNGTACCCNTCTCAAATATCGTCTGAGCAAACACTGAGCAA CCTATGAACGATNGAGCAGAATGTCGAATTGTCG



consensusID : consensus_10939#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 444
fasta sequence
                              [AGAAATGTGGGTAAACACATACATACTATTGAGGCATGATAAATCGAACCTTGTAAATACGACTTTCGGTTTACATTTGAGTTGTGGGGTAGTTAAATGAGAAATATCCAGTTCTATCTTTCTATTTATGCTAATAATCGCTTTTTCGCTATTTCAGTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTACCATCCATAACCTCGCANAAATTGGAGAATAACGC]

[+] EMBL CD183277             [AGAAATGTGGGTAAACACATACATACTATTGAGGCATGATAAATCGAACCTTGTAAATACGACTTTCGGTTTACATTTGAGTTGTGGGGTAGTTAAATGAGAAATATCCAGTTCTATCTTTCTATTTATGCTAATAATCGCTTTTTCGCTATTTCAGTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCTTGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTACCATCCATAACCTCGCANAAATTGGAGAATAACGC]


>consensus_10939#4 AGAAATGTGGGTAAACACATACATACTATTGAGGCATGATAAATCGAACCTTGTAAATAC GACTTTCGGTTTACATTTGAGTTGTGGGGTAGTTAAATGAGAAATATCCAGTTCTATCTT TCTATTTATGCTAATAATCGCTTTTTCGCTATTTCAGTCGGCGGACAATAAATTAGCTCA ATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGC AAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGG TGCTTCACAAAAGAGTACTAGCTCAGCTGCTCTTTGGCGTACTGAACTTAATGTATCGCT TGCTACTCAACACTTGTGTCAACTGTCTAAATTATGTTCGGAAACAGTACCATCCATAAC CTCGCANAAATTGGAGAATAACGC



consensusID : consensus_10939#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 247
fasta sequence
                              [AACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCAGTCAGCTTCA]

[-] EMBL CD181640             [AACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAAAAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCAGTCAGCTTCA]


>consensus_10939#5 AACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTGGAA AAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTCGCT GTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGCAAT GCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCAGTC AGCTTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10939#0      CTATTTGGTTTGTTCATTCAACTGTTCTCATCCCCTCTTGAATCGGTAAAAAATAACTAC 60
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      AAAATATATATTGATGAACAACGATTATGATGATCGTGATGACGGTGGATAATCACACTG 120
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      GATAATGCCTTATTCTTCTTGCTTGTACTACTACTACCACTACTTATACTACTGCCATAA 180
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ATCTCATTTATGTACAACTGCCTATTTTCTGGACTATGTGCAAACGGTATGGAATGTATG 240
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      GTCAATGTTCGTGATATGCCCTAAAATATTCCCGGATTCTCCTAAATTTTCGGTATCTTT 300
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      TCGCCTAAATGATCTTTATCAAGGTGGAATTATTAACATCGTGTCGAGATGTTGCTACTG 360
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      CTTTACGTAGTGTGTTTCTTTCATCCGGTAAAGTACAAGGGCGTCCGTCCCTAGATCCTA 420
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      TTTATGATGAAGTTCGATCAAACGCTCAGGTTGTTATTTCTAATGTTGGTCAGCTCCTTC 480
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      AAACACTAAAGTCAGTAGAAGAAGATGAACGCCGAGGAATTCGATCTCTTGAGCTAGCTG 540
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      CTAATTATTGTCGTGAACAAGCTAAACTCCTTCCATCATCTAAGGATCCAGAAGGGTTGC 600
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      TTACACCAAATAGTTCACGTAAATCGGGTCCGCGTAGTACTTCAGTTGCTAGTGGTTCTT 660
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      CTAGTTTAATTGCTCGTTATTTAGCTCCAGATGATTTAGCTCGTGCTGCTGGTGGACCTG 720
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ------------------------------------------------------------
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ----------------------------------------------------------AG 2
                                                                                   

consensus_10939#0      TTCAGTCAGCTGTTTCAAAAGCAATCTTAGCGAATAATACACAAATTCATCGTGACATTG 780
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ----------------------------------TTCGGCACGAGGGCGTCTGAGCAAAC 26
consensus_10939#2      -----------------------------GCTTCTTCTTCA-AATATCGTCTGAGCAAAC 30
consensus_10939#4      AAATGTGGGTAAACACATACATACTATTGAGGCATGATAAATCGAACCTTGTAAATACGA 62
                                                                                   

consensus_10939#0      TCCAGACATCATCAGCAACACGAGATGCAGTCGCTGATTTAGTTGCAGCTGCCAAGTGTT 840
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      -------------------GAACGATGAAGCAGAATGTCGAATTGTCGATGC----TATT 37
consensus_10939#1      CACTGAGCAAAC-TATGAACGATGAAGCAG---AATGTCGAATTGTCGATGCTATTAATC 82
consensus_10939#2      CACTGAGCAAAC-TATGAACGATGAAGCGG---AATGTCGAATTGTCGATGCTATTAATC 86
consensus_10939#4      CTTTCGGTTTACATTTGAGTTGTGGGGTAGTTAAATGAGAAATATCCAGTTCTATCTTTC 122
                                                                                   

consensus_10939#0      TACTACGTTATTCGGATATTCCTCCGGAAACACGATCATCATGTGCTATAGTGACAAGGG 900
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      AATCAGCTTATTTCATCGTT-----GGAAAAATGCTCGGCGGACAATAAATGAGCTCAAT 92
consensus_10939#1      AGCTTA----ATTCATCGAT-----GGAAAAATGCTCGGCGGACAATAAATTAGCTCAAT 133
consensus_10939#2      AGCTTA----ATTCATCGTT-----GGAAAAATGCTCGGCGGACAATAAATTAGCCCAAT 137
consensus_10939#4      TATTTATGCTAATAATCGCTTTTTCGCTATTTCAGTCGGCGGACAATAAATTAGCTCAAT 182
                                                                                   

consensus_10939#0      AATTGGCTGAAGAGTTCGCTGCTTTATTGGATGCTCTTAAAAATGGGTTATACATTCCTA 960
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      CTCTTCTTG------TCACCGCGCGATCAGTCGCTGT-----ATCTGTT-CAAAATCTTA 140
consensus_10939#1      CTCTTCTTG------TCACCGCGCGATCAGTCGCTGT-----ATCTGTT-CAAAATCTTA 181
consensus_10939#2      CTCTTCTTG------TCACCGCGCGATCAGTCGCTGT-----ATCTGTT-CAAAATCTTA 185
consensus_10939#4      CTCTTCTTG------TCACCGCGCGATCAGTCGCTGT-----ATCTGTT-CAAAATCTTA 230
                                                                                   

consensus_10939#0      GGAAATCAGGTCCAGAAAATGTTTCGAATATAGCTCGTCGTATTGCTGATATTTCACACA 1020
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      TCAGAAC---TGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTG----TCGACAGA 193
consensus_10939#1      TCAGAAC---TGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTG----TCGACAGA 234
consensus_10939#2      TCAGAAC---TGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTG----TCGACAGA 238
consensus_10939#4      TCAGAAC---TGCAAGGACTGTTATTTCCGTACCCCCAAGCAATGCTG----TCGACAGA 283
                                                                                   

consensus_10939#0      GTTTGATCAATTTAGTTGACAGTCTTAGAGAGGGACCACGACTGATTATGTATTTTCGTG 1080
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      GCTCGGACGGC--AGAAGGT-GCTTCACAAAAGAGTACTAGCTCAGC-TGCTCTTTGGCG 249
consensus_10939#1      GCTCGGACGGC--AGAAGGT-GCTTCACAAAAGAGTACTAGCTCAGC-TGCTCTTTGGCG 290
consensus_10939#2      GCTCGGACGGC--AGAAGGT-GCTTCACAAAAGAGTACTAGCTCAGC-TGCTCTTTGGCG 294
consensus_10939#4      GCTCGGACGGC--AGAAGGT-GCTTCACAAAAGAGTACTAGCTCAGC-TGCTCTTTGGCG 339
                                                                                   

consensus_10939#0      CAAGCAGTCCGGAATGGCGTGATGTTGCTGAAAAGTT-CATCGGGCGTCATGTAGCTTAT 1139
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      TACTGAACTTAACGTATCGC----TTGCTGAAAAGTT-CATCGGGCGTCATGTAGCTTAT 304
consensus_10939#1      TACTGAACTTAATGTATCGCT-TGCTACTCAACACTTGTGTCAACTGTC---TAAATTAT 346
consensus_10939#2      TACTGAACTTAATGTATCGCT-TGCTACTCAACACTTGTGTCAACTGTC---TAAATTAT 350
consensus_10939#4      TACTGAACTTAATGTATCGCT-TGCTACTCAACACTTGTGTCAACTGTC---TAAATTAT 395
                                                                                   

consensus_10939#0      CATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTCAAAATCACACAAAAGTATT 1199
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      CATCATCATTATGTATCAAATTATGCTCTAGGTGGCAGTTTCAAATCACACAAAAGTATT 364
consensus_10939#1      GTTCGGAAACA-GTACCAT-CCATAACCTCGCAAAAATTGGAGAATAACGCCGGGGAGTT 404
consensus_10939#2      GTTCGGAAACA-GTACCAT-CCATAACCTCGCAAAAATTGGAGAATGACGCCGGGGAGTT 408
consensus_10939#4      GTTCGGAAACA-GTACCAT-CCATAACCTCGCANAAATTGGAGAATAACGC--------- 444
                                                                                   

consensus_10939#0      TTCATTCGTCCCACATGTTACCCTCTTCAAATATCGTCTGAGCAAACCACTGAGCAAACT 1259
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      TTCATTCGTCCCACATNGTACCCNTCTCAAATATCGTCTGAGCAAAC-ACTGAGCAACCT 423
consensus_10939#1      ATCAGGAGGATTAATTTTATCACGCGAAAGACTTCTGGCTGCTGTGC-----GTCAAGTG 459
consensus_10939#2      ATCAGGAGGATTAATTTTATCACGCGAAAGACTTCTGGCTGCTGTGC-----GTCAAGTG 463
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ATGAACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTG 1319
consensus_10939#5      ---AACGATGAAGCAGAATGTCGAATTGTCGATGCTATTAATCAGCTTAATTCATCGTTG 57
consensus_10939#3      ATGAACGATNGAGCAGAATGTCGAATTGTCG----------------------------- 454
consensus_10939#1      GCAACTGCAGGAGCTCAGTTACTCTTAGCAGCTAAATTAAGAAAAGAAGCTTTAATGTCT 519
consensus_10939#2      GCAACTGCAGGAGCTCAGTTACTCTTAGCAGCT--------------------------- 496
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      GAAAAATGCCCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTC 1379
consensus_10939#5      GAAAAATGCTCGGCGGACAATAAATTAGCTCAATCTCTTCTTGTCACCGCGCGATCAGTC 117
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      GCTGATATTCGAAAGTTGAAAACTGCAGGACAAGCTGTCAAAGAGTCAACAGACTTACTT 579
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      GCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGAACCCCCAAGC 1439
consensus_10939#5      GCTGTATCTGTTCAAAATCTTATCAGAACTGCAAGGACTGTTATTTCCGTACCCCCAAGC 177
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      GCTGAAACTGTTCAACGAGGTGACATAGTTTCGAATAGTTCAACTTCACCACAAATAGAA 639
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      AATGCTGTCGACAGAGCTCGGACGGCAGTCGGTG----AAGGCAGGGTACAG-------- 1487
consensus_10939#5      AATGCTGTCGACAGAGCTCGGACGGCAGAAGGTGCTTCACAAAAGAGTACTAGCTCAGCA 237
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ATCACTTGGCCAACTTACACAAATCAAGCGTTGTTACAGGGTATCCATACAAAAGCACGA 699
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      GTCAGCTTCA-------------------------------------------------- 247
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ATTCAATCTCAACAAATGGAATTAGAAGCATTAGAATCACGTCTTGCTAGTTTAAAACAA 759
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      TCATAATCATTATCTATATAGATAAATTTACATTGTACAGTACTATTAAATAATCATTTC 819
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      AACTGGAATAAATTATTTCTGTTTATTTATTGATTCTTTGTTAGTAATATATTCCAGTTG 879
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      TGTTTTATCTTTTTCGCAAATTTCTTTTCATTTTCGTTACTTTAATTCAGATTAAAAGAA 939
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ACTTATACTATTTATACATACATATACATGTATGTGTTTGCATGCTTCACTCCATGTGTG 999
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      TGTATGTGTATGTATGTATGTATACCTACCTACCAACATACGCTTTTTCATTGTTTTTTT 1059
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      TTAATGGTATGCTTTTTAATTGTCAATTATTCATACATTTCATTTTTTCTTTCTTATTTA 1119
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      TATTCTTAATCCCAGTGATTAAGATGGGAACAAGTTGATTATGATCATTGATAATACTTT 1179
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ATTTTATTGAATTTAACCTACAGATATCTGCATGATAATATTCATTTAAATGCATGTAAT 1239
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      ATACACCGCTTTTGAGATTATATATTATAGAGTTGTTAATTATTATTGGAGTATTCGCCT 1299
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      TATTGGTTTTTTTTTCAATTCCTTTGTTTTTATGATGCTTACTTGTTTTGTTTTGGCGCC 1359
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ------------------------------------------------------------
consensus_10939#5      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#1      GTCATTTTAAAGCCTTATTCTTTGAATTATTTATTACATTTTCTGGATAGTATTATGGTA 1419
consensus_10939#2      ------------------------------------------------------------
consensus_10939#4      ------------------------------------------------------------
                                                                                   

consensus_10939#0      ---------------
consensus_10939#5      ---------------
consensus_10939#3      ---------------
consensus_10939#1      CTTTGATATAATAAA 1434
consensus_10939#2      ---------------
consensus_10939#4      ---------------
                                      




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)