cluster # 10949

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Schistosoma mansoni
cluster # 10949 cluster # 10949 Sequences # 26 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10949#0 length = 906 sequences # 21

consensus_10949#1 length = 643 sequences # 4
consensus_10949#2 length = 174 sequences # 1

consensusID : consensus_10949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 906
fasta sequence

                              [TTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCACAGGCTTACGGAACGCTCCGCTACCGCGTGGCTTACGCCACACCCTAAGCTTCGGTGCATCACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGGTATTCGCTCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG-TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCAAGTCCGACAATTTCACTTT]

[+] EMBL CD092959             [TTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCACAGGCTTACGGAACGCTCCGCTACCGCGTGGCTTACGCCACACCCTAAGCTTCGGTGCATCACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTACTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGGTATTCGCTCGAGGCACTACCTCAATAGTTNTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAG                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD124388             [TTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCACAGGCTTACGGAACGCTCCGCTACCGCGTGGCTTACGCCACACCCTAAGCTTCGGTGCATCACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGGTATTCGCTCGAGGCACTACCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD124475             [ TCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCACAGGCTTACGGAACGCTCCGCTACCGCGTGGCTTACGCCACACCCTAAGCTTCGGTGCATCACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGGTATTCGCTCGAGGCACTACCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD163504             [                                                                                                          CTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGGTATTCGCTCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCC                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD112874             [                                                                                                                            TTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD163274             [                                                                                                                            TTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGACTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGGTATACGCTCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCGTTGTTACCGCATCTTCATCCTGGTCA                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD125142             [                                                                                                                                                                                                                                                            ACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGGATAGTACTCTTGGGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCCAAGGTATTCGTCCGAGGCACTACTTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAGCACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCT                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD124849             [                                                                                                                                                                                                                                                                              GGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTAGTAAGTATTCGGAGTTTGGTTAGAGTTGGTAGGTCTAGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD163286             [                                                                                                                                                                                                                                                                                                                                                                                                                  CGGTATTCGCTCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGTCGGGTTTCGGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCCGCCCTACTC                    ]
[+] EMBL CD111851             [                                                                                                                                                                                                                                                                                                                                                                                                                                       CCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCGAAACA AACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCA                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD125057             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCAC                                                                                                                                                    ]
[+] EMBL CD125076             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCGCGGCGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGGTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTCCTGTTTCAC                                                                                                                                                    ]
[+] EMBL CD125055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTTGATCGCCGGGTTTCGGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCAC                                                                                                                                                    ]
[+] EMBL CD125080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAACCCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGAACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCAC                                                                                                                                                    ]
[+] EMBL CD125084             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCCCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCAC                                                                                                                                                    ]
[-] EMBL CD125058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCCTGAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAATTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACT                                                                                                                                                   ]
[-] EMBL CD165775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGGGTTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCG TGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCC                             ]
[+] EMBL CD165001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGCTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCCCTA                                                       ]
[+] EMBL CD164939             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCAAGTCCGACAATTTCAC   ]
[+] EMBL CD164944             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGGCTTAAGCTTGCTTGATACATTAAGTCACTGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCAAGTCCGACAATTTCACTTT]
[-] EMBL CD165013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCAAGTCCGACAATTTCACT  ]




>consensus_10949#0
TTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCACAGGCTTACGGAACGC
TCCGCTACCGCGTGGCTTACGCCACACCCTAAGCTTCGGTGCATCACTTTAGCCCCGTTA
CATCTTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGAT
GGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGT
GATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCTTTTGACGACGGACCTTAG
CACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGGAGTTTGGTTAGAGTTGGT
AGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTACGGTATTCGCTCGAGGCA
CTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCTTGATTGGCCTTTCACCCC
TAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTCGGACCTCCAGTGCGTGTT
ACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTCGGGTCTAATACATCAAACT
CTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGCTTG
ATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCC
AACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTC
ACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGG
TGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCAAGTCCGACAATTT
CACTTT

consensusID : consensus_10949#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 643
fasta sequence

                              [TACTCATGTCAGCATTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCAACGGCCTACGGAACGCTCCGCTACCGCGTGATCGTAAACGATCACACCCTAAGCTTCGGTGCATCACTTTAGCCCCGTTACATTTTCGCCG-AGGAACCCTTGTTTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATGCTTTCCCACTTAATGATGACTTGGGGACCTTACCTGTAAGTTAAGGCTGTTTCCCTTTTGACGACGGACCTTATCACCCGCCGTCTGTCTGCCGAACAAGTCTCGCTGGTATTCGGAGTTTGGTTAGAATTGGTAGATCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCAGCGGCATACATTCGACGCTCTACCTCAATAGATTTCGCGGAGAACCAGCTATTTCCCGGTTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGAGAATTTTTCAGCATTCAACGGTTCGGTCCTCCAAGTGCGTGTTACCGCACCTTCAACCTGGTCATGCATAGATCACCGGGTTTCGGGTCTAATTCATCGAACTCTGTCGCCCTATTCAGACTCGCTTT]

[-] EMBL CD123886             [TACTCATGTCAGCATTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCAACGGCCTACGGAACGCTCCGCTACCGCGTGATCGTAAACGATCACACCCTAAGCTTCGGTGCATCACTTTAGCCCCGTTACATTTTCGCCGCAGAAACCCTTGATTAGACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTTCCACATGCTTTCCCAgggta                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD088409             [                                                                                                                                                      AGGAACCCTTGTTTATACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTACCTGTATGTTACGGCTGTTTCCCTTTTGACGACGGACCTTATCACCCGCCGTCTGTCTG                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD088419             [                                                                                                                                                      AGGAACCCTTGTTTATACCAATGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATGCTTTCCCACTTAATGATGACTTGGGGACCTTATCTGTAAGTTAAGGCTGTTTCCCT                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD088486             [                                                                                                                                                       GGAACCCTTGTTTAGACCAGTGAGCTGTTACGCTTTCCTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTTAGGGCTGTTTCCCTTTTGACGACGGACCTTAGCACCCGCCGTCTGTCTGCCGAACAAGTCTCGCTGGTATTCGGAGTTTGGTTAGAATTGGTAGATCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCAGCGGCATACATTCGACGCTCTACCTCAATAGATTTCGCGGAGAACCAGCTATTTCCCGGTTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGAGAATTTTTCAGCATTCAACGGTTCGGTCCTCCAAGTGCGTGTTACCGCACCTTCAACCTGGTCATGCATAGATCACCGGGTTTCGGGTCTAATTCATCGAACTCTGTCGCCCTATTCAGACTCGCTTT]




>consensus_10949#1
TACTCATGTCAGCATTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCAAC
GGCCTACGGAACGCTCCGCTACCGCGTGATCGTAAACGATCACACCCTAAGCTTCGGTGC
ATCACTTTAGCCCCGTTACATTTTCGCCGAGGAACCCTTGTTTAGACCAGTGAGCTGTTA
CGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCAC
ATGCTTTCCCACTTAATGATGACTTGGGGACCTTACCTGTAAGTTAAGGCTGTTTCCCTT
TTGACGACGGACCTTATCACCCGCCGTCTGTCTGCCGAACAAGTCTCGCTGGTATTCGGA
GTTTGGTTAGAATTGGTAGATCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCAGC
GGCATACATTCGACGCTCTACCTCAATAGATTTCGCGGAGAACCAGCTATTTCCCGGTTT
GATTGGCCTTTCACCCCTAAACACAACTCATCCGAGAATTTTTCAGCATTCAACGGTTCG
GTCCTCCAAGTGCGTGTTACCGCACCTTCAACCTGGTCATGCATAGATCACCGGGTTTCG
GGTCTAATTCATCGAACTCTGTCGCCCTATTCAGACTCGCTTT

consensusID : consensus_10949#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 174
fasta sequence

                              [CACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCATGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTANAAAGTGGTCC]

[-] EMBL CD162628             [CACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCATGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTANAAAGTGGTCC]




>consensus_10949#2
CACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCATGAGCTGTTACG
CTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCACAT
GCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTANAAAGTGGTCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10949#0      --------------TTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCACA 46
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      TACTCATGTCAGCATTCGCACTTCCGATACCTCCACGACCCATTACCAGATCGCTTCAAC 60
                                                                                   

consensus_10949#0      GGCTTACGGAACGCTCCGCTACCGCGTGGCTTACG----CCACACCCTAAGCTTCGGTGC 102
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      GGCCTACGGAACGCTCCGCTACCGCGTGATCGTAAACGATCACACCCTAAGCTTCGGTGC 120
                                                                                   

consensus_10949#0      ATCACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCAGTGAGCTGTT 162
consensus_10949#2      --CACTTTAGCCCCGTTACATCTTCGCCGCAGAACCTCTTATTTAGACCA-TGAGCTGTT 57
consensus_10949#1      ATCACTTTAGCCCCGTTACATTTTCGCCGAGGAACC-CTTGTTTAGACCAGTGAGCTGTT 179
                         ******************* *******  ***** *** ********* *********

consensus_10949#0      ACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCA 222
consensus_10949#2      ACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTTCCA 117
consensus_10949#1      ACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCA 239
                       **************************************************** * * ***

consensus_10949#0      CATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCT 282
consensus_10949#2      CATGCTTTCCCACTTAGTGATGACTTGGGGACCTTAGCTGTAGGTANAAAGTGGTCC--- 174
consensus_10949#1      CATGCTTTCCCACTTAATGATGACTTGGGGACCTTACCTGTAAGTTAAGGCTGTTTCCCT 299
                       **************** ******************* ***** **      ** * *   

consensus_10949#0      TTTGACGACGGACCTTAGCACCCGCCGTCTGTCTCCCGAGTAGTACTCGTAGGTATTCGG 342
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      TTTGACGACGGACCTTATCACCCGCCGTCTGTCTGCCGAACAAGTCTCGCTGGTATTCGG 359
                                                                                   

consensus_10949#0      AGTTTGGTTAGAGTTGGTAGGTCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCTA 402
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      AGTTTGGTTAGAATTGGTAGATCTCGCGACCCCCGCATCCATCCAGTGCTCTACCCCCAG 419
                                                                                   

consensus_10949#0      CGGTATTCGCTCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGCT 462
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      CGGCATACATTCGACGCTCTACCTCAATAGATTTCGCGGAGAACCAGCTATTTCCCGGTT 479
                                                                                   

consensus_10949#0      TGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTTC 522
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      TGATTGGCCTTTCACCCCTAAACACAACTCATCCGAGAATTTTTCAGCATTCAACGGTTC 539
                                                                                   

consensus_10949#0      GGACCTCCA-GTGCGTGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTC 581
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      GGTCCTCCAAGTGCGTGTTACCGCACCTTCAACCTGGTCATGCATAGATCACCGGGTTTC 599
                                                                                   

consensus_10949#0      GGGTCTAATACATCAAACTCTGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCT 641
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      GGGTCTAATTCATCGAACTCTGTCGCCCTATTCAGACTCGCTTT---------------- 643
                                                                                   

consensus_10949#0      AACGGCTTAAGCTTGCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGT 701
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      ------------------------------------------------------------
                                                                                   

consensus_10949#0      CAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCC 761
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      ------------------------------------------------------------
                                                                                   

consensus_10949#0      CCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACG 821
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      ------------------------------------------------------------
                                                                                   

consensus_10949#0      AGTATTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAGACAGGATTACACGTGTCCCGCCC 881
consensus_10949#2      ------------------------------------------------------------
consensus_10949#1      ------------------------------------------------------------
                                                                                   

consensus_10949#0      TACTCAAGTCCGACAATTTCACTTT 906
consensus_10949#2      -------------------------
consensus_10949#1      -------------------------