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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10950#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1523 fasta sequence
[CTAGGTGACGTAGCCGTGCATAAAAAAGACTAATTAAAGCAGAATCTGCAAACCATGATGTCTTGTTTTCAGAACCTGTCAGACGCACTAGATGATACTTTTTCTGCAACTGTGCAGTCGGAAGATGAACTAGATTACGCATCTGCAACACTCGTCTTAGCTGGATTATTACAAATTCATTCCCGCACACCTCGTTATGCATTTCATCAGGCGCGGTTAGATTCATTTCCAAAAGTAATTCATTCGAAGGATTCTGCGAATGATTCAACAATATGCCGATCAAAGTCTCCAGTTCCATCTCCTTCTGAGCTGGCTTCGGCAGGCTTTTTTCACACCGGTTCTGGGGACGAGACTATCTGCCCTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT-CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT-GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC-TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT-CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG-TTCTTGCGTTGTGGCGTTTGCAAGCGGAAGCTGCTGGAATGGGGCAGGCGTGTCCACCAATAAAGTCAATCTATATTGGTCCTCAAGCCACAACAGAGCTATTAAAAGCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAAC-ACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTCCCAGTTGCTCATATTACATTAATCATTCAGTTTCAAAATAATATTTAATTTCACATACTTTAGGGAACAGTATCTATTTCTTTCGATATATTTCAACAAATTCACTTCACACCTAATATACTTGGTAAATTAAGTTTGTAATTTCCCTTGTAAAAAATAAATATCCCA-TTTAGANGATTTCGAGTTAATA]
[-] EMBL CD170250 [CTAGGTGACGTAGCCGTGCATAAAAAAGACTAATTAAAGCAGAATCTGCAAACCATGATGTCTTGTTTTCAGAACCTGTCAGACGCACTAGATGATACTTTTTCTGCAACTGTGCAGTCGGAAGATGAACTAGATTACGCATCTGCAACACTCGTCTTAGCTGGATTATTACAAATTCATTCCCGCACACCTCGTTATGCATTTCATCAGGCGCGGTTAGATTCATTTCCAAAAGTAATTCATTCGAAGGATTCTGCGAATGATTCAACAATATGCCGATCAAAGTCTCCAGTTCCATCTCCTTCTGAGCTGGCTTCGGCAGGCTTTTTTCACACCGGTTCTGGGGACGAGACTATCTGCCCTGCTCGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCGC ]
[+] EMBL CD193726 [ GATTCTGCGAATGATTCAACAATATGCCGATCAAAGTCTCCAGTTCCATCTCCTTCTGAGCTGGCTTCGGCAGGCTTTTTTCACACCGGTTCTGGGGACGAAACTATCTGCCCTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCG ]
[+] EMBL CD071726 [ ATCTGCCCTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATACCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGG ]
[+] EMBL CD160135 [ tgTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG TTCTTGCGTTGTGGCGTTTGCAAGCGGAAGCTGCTGGAAT ]
[-] EMBL CD068531 [ CCACAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATCATCGCCCACCTATCCCGACTATACCATGTCTGTATCTTATTGTGCCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTGTGGTTCCGGTTGGACACACGCAATCTGGTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCGCGAAACGTCA ]
[+] EMBL BG932375 [ gAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATGGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCT ]
[+] EMBL CD200368 [ AGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATAGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCTCCCTC AGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTGNTNNCTGCG TGTGNCGTTTGCA ]
[-] EMBL CD132256 [ CGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG TTCTTGCGTTGTGGC ]
[-] EMBL CD194531 [ CCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAG ]
[-] EMBL CD193034 [ CTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGC ]
[+] EMBL CD141035 [ CCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATAAGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCCGGGGCATTCAGATGATTTAATTG TTCTTGCGTTGTGGCGTTTGCAAGCGG ]
[+] EMBL CD139898 [ TTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG TTCTTGCGTTGTGGCGTTTGCAAGCGGAAGCTGCTGGAATGGGGCAGGCGTGTCCACCAATAAAGTCAATCTATATTGGTCCTCAAGCCACAACAGAGCTATTAAAAGCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAAC ACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAA ]
[-] EMBL BG930288 [ CCACCAATAAAGTCAATCTATATTGATCCTCAAGCCACAACAGAGCTATTAAAAGCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTA ]
[+] EMBL CD180289 [ AGCTATTATAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAACAACCTCGAATTCTATCTGGATGCTTTCTACGATGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGA ]
[-] EMBL CD180412 [ GCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAACAACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTCTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTG ]
[-] EMBL CD076974 [ ACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTAGTCACGTTGTCGTCGATATTTGCGACCACCGCAACAACAGCAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGGGTGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTCCCAGTTGCTCATATTACATTAATCATTCAGTTTCAAAATAATATTTAATTTCACATACTTTAGGGAACAGTATCTATTTCTTTCGATATATTTCAACAAATTCACTTCACACCTAATATACTTGGTAAATTAAGTTTGTAATTTCCCTTGTAAAAAATAAATATCCCA TTTAGANGATTTCGAGTTAATA]
[-] EMBL CD134253 [ CTGGATGCTGTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGCTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCA ]
[+] EMBL BG930380 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACGTTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGA ]
[+] EMBL BG930257 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATG AGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTC TTCAGTTGAATCATATGGATTACAAATGAAAAAGA ]
[+] EMBL BG931751 [ GCTCTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCGACTCCCCGT ]
[+] EMBL BG930378 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGa ]
[+] EMBL BG930535 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGCTCAGTTGAATCATATGGATTACAAATGAAAAAGA ]
[-] EMBL BG930147 [ CTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGAc ]
[-] EMBL CD092735 [ tccAGTAAGAAGTTCATTCCGGCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCT ]
[-] EMBL BG932363 [ AGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGCCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTt ]
[+] EMBL AI740353 [ ATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTCCCAGTTGCTCATATTACATTAATCATTCAGTTTCAAAATAATATTTAATTTCACATACTTTAGGGAACAGTATCTATTTCTTTCGATATATTTCAACAAATTCACTTCACACCTAATATACTTGGTAAATTAAGTTTGTAATTTCCCTTGTAAAAAAT ATATCCCATTTTATGGGATTTCGA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||