These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10960#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 1076 fasta sequence [AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC-GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG-AAAAGATGGCGTACTTCGTATA-TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA-CAGAGATTACCGT-GGTTACTACC-TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT-GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG--AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG-TTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATATGGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGAGTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTACGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG] [+] EMBL CD191139 [AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAGCTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATAT ] [+] EMBL CD160623 [ GGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGg ] [+] EMBL AI977676 [ GACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGTAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGA ] [+] EMBL AI977675 [ GACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGTAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTC ] [-] EMBL CD127464 [ TGGCGAAGCTCGCACTTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTTC ] [-] EMBL CD132123 [ GGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGC ] [+] EMBL CD127346 [ ccgcgctcTAACCATATATTGTGTTCCTGGATGTGATGGGGCCAATGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATCTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTT ] [-] EMBL CD114444 [ AATTGTATGAAGGTTT TTGGGTCGGATCGGTCTGGCGGTAGGCCACGTCCAATATATCGTGGAATAGGTCATTCTCGACCTCTGAATAGAATAATAATAGGACCCGGAAGTTCAGCGGGTGGTGGGTTATTCGTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TCCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCTTGGAGTTCCGGAGCTCCGGAAAACTACTCGTCAA CAGAGATTGCCGT GGTTACTACA TAATGTGGTCCACATGGCTGCATGTTCTACACGTGCT AAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCGGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGCCAAATTGTGGTAAATATGCTCTCATTGGTTATTCGAATGGAGATGTATTCAAGATTTAATAGGCAGTCTGGTTTGGAGCGTGGTTCATATGGTT ] [+] EMBL CD115748 [ AGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGA ] [-] EMBL CD089760 [ acatcCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGATAGAGGCGTGGGATAGTGTGGTTACAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTGAGATTTCATGGATGCGATGATGAA ] [-] EMBL CD111163 [ acatcCAGCGGGTGTTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTC ] [+] EMBL CD118959 [ GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ] [+] EMBL CD118936 [ GTGGGTTATTACTTGGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAGAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ] [+] EMBL CD119160 [ GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ] [+] EMBL CD118963 [ GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ] [+] EMBL CD118992 [ gaTGGGTTATTACTTAGCGCCGGCAAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAGAACTACTCGTCAA CAGAGATTACCGT GGTTACTACCATGATGTGGTCCACATGGTTGCTTGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACGGAAGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ] [-] EMBL CD119142 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ] [-] EMBL CD119147 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ] [-] EMBL CD119288 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ] [-] EMBL CD119118 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTT GAAAATTTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ] [-] EMBL CD119228 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ] [-] EMBL CD119162 [ TGGGTTATTACTCAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATAAGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ] [-] EMBL CD148167 [ TACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATATAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAACCAGAGATTACCGTGGGTTACTACC TGATGTGGTCCACATGGC ] [+] EMBL CD116002 [ TATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATATGGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGAGTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTACGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG] [-] EMBL CD192414 [ GGCGTGGGATAGTGTGGTTGCGATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ] consensusID : consensus_10960#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 268 fasta sequence [GCTTCTTGTATGAATCTCACTTCGAATAATAGTAACAATGAATGCATTAATAATAATAATACTACTACTACTACTACTGATAATGAGTTTATTTTACCTGAATTTATCACTTTATTAAAATCAAACCCCAATGATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGAGACAATGTTGACCTCGGGTAGCTTTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGCTATGGATTGCAACCACACTATCCCACGCCTCA] [+] EMBL CD192569 [GCTTCTTGTATGAATCTCACTTCGAATAATAGTAACAATGAATGCATTAATAATAATAATACTACTACTACTACTACTGATAATGAGTTTATTTTACCTGAATTTATCACTTTATTAAAATCAAACCCCAATGATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGAGACAATGTTGACCTCGGGTAGCTTTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGCTATGGATTGCAACCACACTATCCCACGCCTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10960#0 AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCT 60 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 ATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGT 120 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 AGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACA 180 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 GGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCT 240 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 CGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCC 300 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 AGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTCGATCGGTCT 360 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 GACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATA 420 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 TTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGGAAAAGATGGC 480 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 GTACTTCGTATATTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATAT 540 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 GCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAACAGAGATTACCGTGGTTACTA 600 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 CCTGATGTGGTCCACATGGCTGCATGTTCTACACGTGCTGAGGCGTGGGATAGTGTGGTT 660 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 GCAATCCATAGCGGGAAACGGCAAGTAACGAGCTGGAATTTCGCGAAAGCTACCCGAGGT 720 consensus_10960#1 ------------------------------------------------------------ consensus_10960#0 CAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTAC 780 consensus_10960#1 ------------------------------------GCTTCTTGTATGAATC--TCACTT 22 * * * **** * consensus_10960#0 AAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGT 840 consensus_10960#1 CGAATAATAGTAACAATGAATGCATT-------AATAATAATAATACTACTACTACTACT 75 * ** *** * * * ****** *** * *** * ** * * * consensus_10960#0 TATTCGAATGGAGATGTCTTCAAGTTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATAT 900 consensus_10960#1 ACTGATAATGAGTTTATTTT--ACCTGAATTTATCACTTTATTAAAATCAAACCCCA-AT 132 * **** * * ** * * *** * * ** * * ** ** consensus_10960#0 GGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGA 960 consensus_10960#1 GATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGA-GACAATGTTGACCTC 191 * * ** * * * * * * * * * ** * ***** *** consensus_10960#0 GTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTA 1020 consensus_10960#1 GG----GTAGCT-TTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGC-TATGGATTG 245 * ** ** ** * ** * * * ***** ** * * **** ** * ** consensus_10960#0 CGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG 1076 consensus_10960#1 CAACCACACTATCCCACGCC-TCA-------------------------------- 268 * *** * * ** *** |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||