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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10987#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1899 fasta sequence
[GGAGGTATGAATATTATCCAACTGGCTCTTTATGCTGCTGCTGGTGGTTTGGAACACGAAGCACTAGAACCTTTCTGGCATGTAGCTAGTATGGATGGTGACGAGCTGTATATGCTTAGAAATAAATCTAAATTGTATTTCCGTCGGACAGGTAAGTTATCCAATAATTTGGGCGATCGACTTCAGGCCTGTATCGACGAGAACAACGTACAAGGTGCTCTTGATTTATTGAAAGATCTAAATAAAACGAACATTGCATTAGCGTATACATTATTTGTACCAAGATTAATGTCCTCGGGCGTTTCCTTACAGGACTTATTGAAACAAACCGAAGATCATGAGATAATTAAGGCTTTACTGTTTGGATATGTATTTCGTGAATTAATATCAATACAATCAACAGACGATTTAAAATCACGTCTAACTAACTGTTCGGAATTAGTGAATGAGTATCGTGCTAAGGAATTACTACCGTACAATGATGTTGTTCGTTTAAACTCCTCTGTTTTAGTTAAATTGGTGACAAATATAATATCCGTTTCAGATATTGAAGAGATTGCAAAGTTGAATAAATCAAC-CGTAATGCATGACGTT-TTCGGCATTTTCG-GCCGTACACTGTCAAAACGTGCGTTACGTATGCTTTTCATGCAAGTTTTCGAAGCGTTAACGCTATCCCACCTCCGTTCTTTTCATGGCATTCCAAAA-AATGCTGTAATTCAACTTGTAGCTGATGTGTGCGCTCATCAAGATGTCACGTTTGCTCATGGTGGTTGGATGTTATCGAAATTGAGAGATGCTGATGTACCAACGCACATCATGGCAAAACTTTCTTCTAGTCGATCTGTGGCACTATCTTCATTTTCAAATATAAACGTTCTACTTTTTGATGATCGAGCGAGCAATGCAG-ACGGAAGAAACAAAGATGAAGATCCAGTAACTAATCAAGTGAAGCTGCTCCCTGAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAAGAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATTTTATTGAGTTATCTTGTAAATCTTGGATCAGAAGATGTCGTTGAACGTGTATTACGATTTTTACCGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTAGCAAATGCAAATTGTGACAAACCATCTTCAGAAAGTGTGAAGCAGTCAATTGAAAATTTACAAAATCTTTCATCTCAAGATTTATACGTTACAATGAGGGGTCCACACTTGGATACACTTTTCAGATGTTGGCCAACTGAACAAATTCCCGACTTGGTTATTATCACGAAAAAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATCTAAAATCTGTTGACTCTCACATGTTCCCGGTTNTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAACGATGANCATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTNCAGTCTGTATACCACCACTCTNNCAGNTTATATCATCGNTTGGGAGTGAGCANNATTTACCAGAGATTACTTCAGCTACCAGNCCAGTGTCAGAATTTTATGCATTNNAAGCAAGCTTNNCATGATACGAGCTTTCCCTACTTNTTTTNNNAACGATACATAGGTNTTTTAACATTTNATGGNTTAGNCCCCTGGGGTA]
[+] EMBL CD065224 [GGAGGTATGAATATTATCCAACTGGCTCTTTATGCTGCTGCTGGTGGTTTGGAACACGAAGCACTAGAACCTTTCTGGCATGTAGCTAGTATGGATGGTGACGAGCTGTATATGCTTAGAAATAAATCTAAATTGTATTTCCGTCGGACAGGTAAGTTATCCAATAATTTGGGCGATCGACTTCAGGCCTGTATCGACGAGAACAACGTACAAGGTGCTCTTGATTTATTGAAAGATCTAAATAAAACGAACATTGCATTAGCGTATACATTATTTGTACCAAGATTAATGTCCTCGGGCGTTTCCTTACAGGACTTATTGAAACAAACCGAAGATCATGAGATAATTAAGGCTTTACTGTTTGGATATGTATTTCGTGAATTAATATCAATACAATCAACAGACGATTTAAAATCACGTCTAACTAACTGTTCGGAATTAGTGAATGAGTATCGTGCTAAGGAATTACTACCGTACAATGATGTTGTTCGTTTAAACTCCTCTGTTTTAGTTAAATTGGTGACAAATATAATATCCGTTTCAGATATTGAAGAGATCGCAAAGTTGAATAAATCAAC CGTAATGCATGACGTTNNTC GCATTTTCG GCCGTACACTGTCAAAACGTGCGTTACGTATGCTTTTCATGCc ]
[+] EMBL CD158603 [ AATGTCCTCGGGCGTTTCCTTACAGGACTTATTGAAACAAACCGAAGATCATGAGATAATTAAGGCTTTACTGTTTGGATATGTATTTCGTGAATTAATATCAATACAATCAACAGACGATTTAAAATCACGTCTAACTAACTGTTCGGAATTAGTGAATGAGTATCGTGCTAAGGAATTACTACCGTACAATGATGTTGTTCGTTTAAACTCCTCTGTTTTAGTTAAATTGGTGACAAATATAATATCCGTTTCAGATATTGAAGAGATTGCAAAGTTGAATAAATCAAC CGTAATGCATGACGTT TTCGGCATTTTCG GCCGTACACTGTCAAAACGTGCGTTACGTATGCTTTTCATGCAAGTTTTCGAAGCGTTAACGCTATCCCACCTCCGTTCTTTTCATGGCATTCCAAAA AATGCTGTAATTCAACTTGTAGCTGATGTGTGCGCTCATCAAGATGTCACGTTTGCTCATGGTGGTTGGATGTTATCGAAATTGAGAGATGCTGATGTACCAACGCACATCATGGCAAAACTTTCTTCTAGTCGATCTGTGGCACTATCTTCA TTTNAAATATAAACGTTCTACTTTTTGATGATCGAGCGAGCAATGCAGNAC GAAGAAACAAAGATGAAGATTCAGTAACT ]
[+] EMBL CD141813 [ TTGAAACAAACCGAAGATCATGAGATAATTAAGGCTTTACTGTTTGGATATGTATTTCGTGAATTAATATCAATACAATCAACAGACGATTTAAAATCACGTCTAACTAACTGTTCGGAATTAGTGAATGAGTATCGTGCTAAGGAATTACTACCGTACAATGATGTTGTTCGTTTAAACTCCTCTGTTTTAGTTAAATTGGTGACAAATATAATATCCGTTTCAGATATTGAAGAGATTGCAAAGTTGAACAAATCAAC CGTAATGCATGACGTT TTCGGCATTTTCG GCCGTACACTGTCAAAACGTGCGTTACGTATGCTTTTCATGCAAGTTTTCGAAGCGTTAACGCTATCCCACCTCCGTTCTTTTCATGGCATTCCAAAA AATGCTGTAATTCAACTTGTAGCTGATGTGTGCGCTCATCAAGATGTCACGTTTGCTCATGGTGGTTGGATGTTATCGAAATTGAGAGATGCTGATGTACCAACGCACATCAT ]
[-] EMBL CD139045 [ GATATGTATTTCGTGAATTAATATCAATACAATCAACAGACGATTTATAATCACGTCTAACTAACTGTTCGGAATTAGTGAATGAGTATCGTGCTAAGGAATTACTACCGTACAATGATGTTGTTCGTTTAAACTCCTCTGTTTTAGTTAAATTGGTGACAAATATAATATCCGTTTCAGATATTGAAGAGATTGCAAAGTTGAATAAATCAACTCGTAATGCATGACGTT TTCGGCATTTTCGCACCGTACACTGTCAAAACGTGCGTTACGTATGCTTTTCATGCAAGTTTTCGAAGCGTTAACGCTATCCCACCTCCGTTCTTTTCATGGCATTCCAAAATAATGCTGTA ]
[-] EMBL CD121319 [ ATTCAACTTGTAGCTGATGTGCGCGCTCATCAAGATGTCACGTTTGCTCATGTTGGTTGGATGTTATCGAAATTGAGAGATGCTGATGTACCAACGCACATCATGGCAAAACTTTCTTCTAGTCGATCTGTGGCACTATCTTCATTTTCAAATATAAACGTTCTACTTTTTGATGATCGA ]
[-] EMBL CD158178 [ TAGCTGATGTGTGCGCTCATCAAGATGTCACGTTTGCTCATGGTGGTTGGATGTTATCGAAATTGAGAGATGCTGATGTACCAACGCACATCATGGCAAAACTTTCTTCTAGTCGATCTGTGGCACTATCTTCATTTTCAAATATAAACGTTCTACTTTTTGATGATCGAGCGAGCAATGCAG ACGGAAGAAACAAAGATGAAGATCCAGTAACTAATCAAGTGAAGCTGCTCCCTG ]
[+] EMBL CD194225 [ GATGTTATCGAAATTGAGAGATGCTGATGTACCAACGCACATCATGGCAAAACTTTCTTCTAGTCGATCTGTGGCACTATCTTCATTTTCAAATATAAACGTTCTACTTTTTGATGATCGAGCGAGCAATGCAG ACGGAAGAAACAAAGATGAAGATCCAGTAACTAATCAAGTGAAGCTGCTCCCTGAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAAGAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATTTTATTGAGTTATCTTGTAAATCTTGGATCAGAAGATGTCGTTGAACGTGTATTACGATTTTTACCGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTAGCAAATGCAAATTGTGACAAACCATCTTCAGAAAGTGTGAAGCAGTCAATTGAAAATTTACAAAATCTTTCATCTCAAGATTTA ]
[+] EMBL CD149331 [ cagctgAG ACGGAAAAAACAAAGATGAAGATCCAGTAACTAATCAAGTGAAGCTGCTCCCTGAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAAGAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATTTTATTGAGTTATCTTGTAAATCTTGGATCACAAGATG ]
[+] EMBL CD149287 [ CAAAGATGAAGATCCAGTAACTAATCAAGTGAAGCTGCTCCCTGAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAAGAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATTTTATTGAGTTATCTTGTAAATCTTGGATCAGAAGATGTCGTTGAACGTGTATTACGATTTTTACCGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTAGCAAATGCAAATTGTGACAAACCATCTTCAGAAAGTGTG ]
[+] EMBL CD149445 [ CAAAGATGAAGATCGAGTAACTAATCAAGTGAAGCTGCTCCCTGAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAAGAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATTTTATTGAGTTATCTTGTAAATCTTGGATCAGAAGATGTCGTTGAACGTGTATTACGATTTTTACCGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTAGCAAATGCAAATTGTGACAAACCATCTT ]
[+] EMBL CD149455 [ CAAAGATGAAGATCGAGGGGCTAATCAAGTGAAACTGCTCCCTGAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAATAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATTTTATTGAGTTATCTTGTGAATCTTGGATCACAAGATGTCGTTGAACGTGTATTACGATTATTACCGGCTGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTACCAAATGCACATGGTGACAAACCATCTTCAGAAAGTGTGAAGCAGTCAATTGAAAATTTACAAAATCTTTCATCTCAAGATTTATACGTTACAATGAGGGGTCCACACTTGGATACACTTTTCAGATGTTGGCCAACTGAACAAATTCCCGACTTGGTTA ]
[+] EMBL CD149343 [ CAAAGATGAAGATCCAGTAACTAATCAAGTGAAGCTGCTCCCTGAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAAGAATTGG AAAGGAAATAAAGTCAATTG AAAGTCAT ]
[+] EMBL CD082478 [ AGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAAGAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATTTTATTGAGTTATCTTGTAAATCTTGGATCAGAAGATGTCGTTGAACGTGTATTACGATTTTTACCGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTAGCAAATGCAAATTGTGACAAACCATCTTCAGAAAGTGTGAAGCAGTCAATTGAAAATTTACAAAATCTTTCATCTCAAGATTTATACGTTACAATGAGGGGTCCACACTTGGATACACTTTTCAGATGTTGGCCAACTGAACAAATTCCCGACTTGGTTATTATCACGAAAAAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATCTAAAATCTGTTGACTCTCACATGTTCCCGGTTNTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAACGATGANCATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTNCAGTCTGTATACCACCACTCTNNCAGNTTATATCATCGNTTGGGAGTGAGCANNATTTACCAGAGATTACTTCAGCTACCAGNCCAGTGTCAGAATTTTATGCATTNNAAGCAAGCTTNNCATGATACGAGCTTTCCCTACTTNTTTTNNNAACGATACATAGGTNTTTTAACATTTNATGGNTTAGNCCCCTGGGGTA]
[-] EMBL CD149670 [ GTTATCTTGTAAATCTTGGATCAAAAGATGTCGTTGAACGTGTATTACGATTTTTACCGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTAGCAAATGCAAATTGTGACAAACCATCTTCAGAAAGTGTGAAGCAGTCAATTGAAAATTTACAAAATCTTTCATCTCAAGATTTATACGTTACAATGAGGGGTCCACACTTGGATACACTTTTCAGATGTTGGCCAACTGAACAAATTCCCGACTTGGTTATTATCACGAAAAAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATCGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATNTAAAATCTGTTGACTCTCAgctg ]
[-] EMBL CD149462 [ ATTTTTACGGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAATCATCCTTAGCAAATGCAAATTGTGACAAACCATCTTCAGAAAGTGTGAAGCAGTCAATTGAAAATTTACAAAATCTTTCATCTCAAGATTTATACGTTACAATGAGGGGTCCACACTTGGATACACCTTTCAGATGTTGGCCAACTGAACAAATTCCCGACTTGGTTATTATCACGAAAAAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGCCGAGTATCTAAAA ]
[-] EMBL CD149148 [ CAAAATCTTTCATCTCAAGATTTATACGTTACAATGAGGGGTCCACACTTGGATACACCTTTCAGATGTTGGCCAACTGAACAAATTCCCGACTTGGTTATTATCACGAAAAAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATCTAAAA ]
consensusID : consensus_10987#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 606 fasta sequence
[GACTTGGTTATTATCACGAAAAAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATCTAAAATCTGTTGACTCTCAACATGTTCCCGGTTTTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTATACAAATCAGTTTTGGCCCTCG]
[-] EMBL CD076076 [GACTTGGTTATTATCACGAAAAAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATCTAAAATCTGTTGACTCTCAACATGTTCCCGGTTTTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATT ]
[-] EMBL AI068006 [ TCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAATCGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATGTAAAGTCTGTTGACTCTCAACATGTTCCCGGTTTTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTATACAAATCAGT ]
[-] EMBL CD084221 [ GTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACTTTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAGTATCTAAAATCTGTTGACTCTCAACATGTTCCCGGTTTTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTATACAAATCAGTTTTGGCCCTCG]
[-] EMBL CD141681 [ ATTGACGAAATCTGATTCNNTCGCTTCAGTGGAGTATCTAAAATCTGTTGACTCTCAACATGTTCCCGGTTTTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGA ]
[-] EMBL AI067827 [ CGAAATCTG ATTTCTCGCTTCAGTGGAGTATCTAAAGTCTGTTGACTCTCAACATGTTCCCGGTTATGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTGTACCAGTTAATTCGTACAGTAGTATCTCCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTATACAAATCAGT ]
[-] EMBL AI067813 [ CGAAATCTGAATTTCTCGCTTCAGTGGAGTATCTAAAGTCTGTTGACTCTCAACATGTTCCCGGTTGTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTATACAAATCAGT ]
[-] EMBL AI067652 [ ACATGTTCCCGGTTTTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTGTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTATACAAATCAGT ]
[-] EMBL AI067864 [ TTTTGTGGATTATTGTCTTCGCAATGCAGGTTTGTCAACAAACGATGACAATTTCTCCCAGTTAATTCGTACAGTAGTATCACCACCGTTGAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAGTTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCGGAAATTTGGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTTTACAAATCAGT ]
[-] EMBL AI067643 [ nTGTGGATTATTGTCTTCGCAATGCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATGTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGAAGTGAGCAAAAATTTACCAGAAGATATACTTCAAGCTACACAGCCAGTTGTCCAGAAATTTAGTGCATTAAAAGCAAAAGCTTCCAATTGAATCACGAAGCTCTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTCATCATTGTGTATAATAAATTATACAAATCAGT ]
[-] EMBL AI068106 [ AAATTTAGCAGAAGATATACTTCAAGCTACACATCCAGTTGTCCAGAAATTTCGTGCACTAAAAGCAAACGCTTCCAATTGGATCACGAAGCTTTCCCCCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTTTTTAGTTATCATTGTGTATAATAAATTATACAAATCAGT ]
consensusID : consensus_10987#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 318 fasta sequence
[TTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGGAGTGAGCAAAAATGTAAGTCCTGATTTTGTGTTTCATTTTTCTGAGTTAAGAAAAACTTAATTTGAAAATAGCCCTCATAGATACCTTTTAGTAATATAAACGTCCATCACGATTTATTGATTGTTGTAGATCCAGTGGTTCGAAGGAATTCTTTGTTTGGGTAAATAAACCAACTGGTCAGACAAACTTTCCCAA]
[+] EMBL CD096515 [TTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCACCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCATCGTTTGGGAGTGAGCAAAAATGTAAGTCCTGATTTTGTGTTTCATTTTTCTGAGTTAAGAAAAACTTAATTTGAAAATAGCCCTCATAGATACCTTTTAGTAATATAAACGTCCATCACGATTTATTGATTGTTGTAGATCCAGTGGTTCGAAGGAATTCTTTGTTTGGGTAAATAAACCAACTGGTCAGACAAACTTTCCCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10987#0 GGAGGTATGAATATTATCCAACTGGCTCTTTATGCTGCTGCTGGTGGTTTGGAACACGAA 60
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GCACTAGAACCTTTCTGGCATGTAGCTAGTATGGATGGTGACGAGCTGTATATGCTTAGA 120
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 AATAAATCTAAATTGTATTTCCGTCGGACAGGTAAGTTATCCAATAATTTGGGCGATCGA 180
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 CTTCAGGCCTGTATCGACGAGAACAACGTACAAGGTGCTCTTGATTTATTGAAAGATCTA 240
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 AATAAAACGAACATTGCATTAGCGTATACATTATTTGTACCAAGATTAATGTCCTCGGGC 300
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GTTTCCTTACAGGACTTATTGAAACAAACCGAAGATCATGAGATAATTAAGGCTTTACTG 360
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TTTGGATATGTATTTCGTGAATTAATATCAATACAATCAACAGACGATTTAAAATCACGT 420
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 CTAACTAACTGTTCGGAATTAGTGAATGAGTATCGTGCTAAGGAATTACTACCGTACAAT 480
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GATGTTGTTCGTTTAAACTCCTCTGTTTTAGTTAAATTGGTGACAAATATAATATCCGTT 540
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TCAGATATTGAAGAGATTGCAAAGTTGAATAAATCAACCGTAATGCATGACGTTTTCGGC 600
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 ATTTTCGGCCGTACACTGTCAAAACGTGCGTTACGTATGCTTTTCATGCAAGTTTTCGAA 660
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GCGTTAACGCTATCCCACCTCCGTTCTTTTCATGGCATTCCAAAAAATGCTGTAATTCAA 720
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 CTTGTAGCTGATGTGTGCGCTCATCAAGATGTCACGTTTGCTCATGGTGGTTGGATGTTA 780
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TCGAAATTGAGAGATGCTGATGTACCAACGCACATCATGGCAAAACTTTCTTCTAGTCGA 840
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TCTGTGGCACTATCTTCATTTTCAAATATAAACGTTCTACTTTTTGATGATCGAGCGAGC 900
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 AATGCAGACGGAAGAAACAAAGATGAAGATCCAGTAACTAATCAAGTGAAGCTGCTCCCT 960
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GAAGAATCTATACCTACTACCGCCGAATCACTTGTCAAAGCATCAAAAAATGATCCTGAA 1020
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GAATTGGAAAAGGAATTAAAGTCAATTGAAAAGTCATGGAGATTACAAAAGAAATTCATT 1080
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TTATTGAGTTATCTTGTAAATCTTGGATCAGAAGATGTCGTTGAACGTGTATTACGATTT 1140
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TTACCGGATGAACATAAACGACAACTTGAACCAATGAAATCAATCGCACATATAATAAAA 1200
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TCATCCTTAGCAAATGCAAATTGTGACAAACCATCTTCAGAAAGTGTGAAGCAGTCAATT 1260
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GAAAATTTACAAAATCTTTCATCTCAAGATTTATACGTTACAATGAGGGGTCCACACTTG 1320
consensus_10987#1 ------------------------------------------------------------
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GATACACTTTTCAGATGTTGGCCAACTGAACAAATTCCCGACTTGGTTATTATCACGAAA 1380
consensus_10987#1 ---------------------------------------GACTTGGTTATTATCACGAAA 21
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 AAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAAT 1440
consensus_10987#1 AAACTCTCCAAACTTGGTCTCAATTCTGTCAGTTTACAGTTGGCTGGAGTTTTGATTAAT 81
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 CGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACT 1500
consensus_10987#1 CGTGGGCTGAGTGACTTAGTTTCTACTTTGTTGGAGAATAACAAAACAGTTCCGTTTACT 141
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAG 1560
consensus_10987#1 TTCTTGGTTGGTAATCCACGAAATTCATTGACGAAATCTGAATTTCTCGCTTCAGTGGAG 201
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 TATCTAAAATCTGTTGACTCTCA-CATGTTCCCGGTTNTGTGGATTATTGTCTTCGCAAT 1619
consensus_10987#1 TATCTAAAATCTGTTGACTCTCAACATGTTCCCGGTTTTGTGGATTATTGTCTTCGCAAT 261
consensus_10987#2 ------------------------------------------------------------
consensus_10987#0 GCAGCTTTGTCAACAA-CGATGANCATTTCTACCAGTTAATTCGTACAGTAGTATCACCA 1678
consensus_10987#1 GCAGCTTTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCA 321
consensus_10987#2 ------TTGTCAACAAACGATGACAATTTCTACCAGTTAATTCGTACAGTAGTATCACCA 54
********** ****** ***********************************
consensus_10987#0 CCGTTCAATATGGATCTTCTTNCAGTCTGTATACCACC-ACTCTNNCAGNTT-ATATCAT 1736
consensus_10987#1 CCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCAT 381
consensus_10987#2 CCGTTCAATATGGATCTTCTTCAAGTCTGTATACAACCCACTCTCCAAGTTTTATATCAT 114
********************* *********** *** ***** ** ** *******
consensus_10987#0 CGNTTGGGAGTGAGCANNA-TTTA---CCAGA-GAT-TACTTCA-GCTACCAGNCCA-GT 1788
consensus_10987#1 CGTTTGGAAGTGAGCAAAAATTTA---CCAGAAGATATACTTCAAGCTACACAGCCA-GT 437
consensus_10987#2 CGTTTGGGAGTGAGCAAAAATGTAAGTCCTGATTTTGTGTTTCATTTTTCTGAGTTAAGA 174
** **** ******** * * ** ** ** * * **** * * * *
consensus_10987#0 G--TCAGAATTTTA-TGCATTNNAAGCAA---GCTTNNCATGATAC----GAGCTTTCCC 1838
consensus_10987#1 TGTCCAGAAATTTAGTGCATTAAAAGCAAA-AGCTTCCAATTGAATCACGAAGCTCTCCC 496
consensus_10987#2 AAAACTTAATTTGAAAATAGCCCTCATAGATACCTTTTAGTAATAT----AAACGTCCAT 230
* ** ** * * * *** * * * * *
consensus_10987#0 T---ACTTNTTTTNNNAA----CGATAC-ATAGGTNTTTT----AACA--TTTNATGGNT 1884
consensus_10987#1 CCTCACTTCTTTCTTCAAACCGCAATACCATAGGTTTCTTTATGAACAATTTTAATTGTT 556
consensus_10987#2 CACGATTTATTGATTG------TTGTAGATCCAGTGGTTCGAAGGAATTCTTTGTTTGGG 284
* ** ** ** ** * * *** * *
consensus_10987#0 T--AGNCCCC-TGGGGTA-------------------------------- 1899
consensus_10987#1 TTTAGTCATCATTGTGTATAATAAATTATACAAATCAGTTTTGGCCCTCG 606
consensus_10987#2 TAAATAAACCAACTGGTCAGACAAACTTTCCCAA---------------- 318
* * * **
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||