These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11024#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 27 consensus length = 1394 fasta sequence [CTGAATTACTAAAGGAGAAGTTTCCATATGGACTAGATTATGAATTGATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGTCATCTTTACCGCTGATCTCAGTGTTCCCCTGCATAACATTCACACAAGTAAAAAGCACACGCTTTTACCGAACTGAAAACA] [+] EMBL CD123558 [CTGAATTACTAAAGGAGAAGTTTCCATATGGACTAGATTATGAATTGATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACAGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGTACCCCAGTGGTACAAAATAAAGAAGATGGTGA ] [+] EMBL CD123561 [CTGAATTACTAAAGGAGAAGTTTCCATATGGACTAGATTATGAATTGATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACAGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGTACGCCAGTGGTACAAAATAAACAAGATGGTGA ] [-] EMBL CD151647 [ GAATTACTAAAGNAGAAGTTTCCATATGGACTAGATTATGAATTGATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGAATGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGC ] [+] EMBL CD137370 [ TTATGAATTGATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTNTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGTGGGGGATTTCGTTGGATGTGGCATG ] [+] EMBL CD116980 [ ATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATGAATATGAGCTTA ] [+] EMBL CD186383 [ ACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGT ] [+] EMBL CD186351 [ ACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGAT ] [-] EMBL CD186462 [ TTCGTTGGATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGT ] [+] EMBL CD114218 [ GCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGAT ] [+] EMBL CD114121 [ GCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGACATACCTGTCTCACCTTTGGTTAACGGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTCCGT ] [-] EMBL CD114212 [ CTAATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATC ] [-] EMBL CD154707 [ TTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTC ] [-] EMBL CD154765 [ TTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTC ] [-] EMBL CD154496 [ TTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGGATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTC ] [-] EMBL CD181977 [ CCATGTAG TGATCAGACAG TTTGCAGA TTCCACATACGC TTGTAAACCACCTACGTAAC TTCGTGGAC TGGA TGCTTGATCCAGAGTCGCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATT ] [-] EMBL CD186927 [ ATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAag ] [+] EMBL CD186946 [ TAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTC ] [-] EMBL CD187432 [ AGCTGATCAGACAGTTTTGCAGATTTCCACATACGCTGTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCG ] [+] EMBL CD094722 [ cgacCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGG ] [-] EMBL CD195309 [ ACCCGTCTCACTTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGTCATCTTTACCGCTGATC ] [+] EMBL CD095247 [ TGTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTTTGTGAACA ] [-] EMBL CD095123 [ GTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGT ] [-] EMBL CD095124 [ GTCTCACCTTTGGTTAACAGTACAGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATTAGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGT ] [-] EMBL CD095079 [ AGGTACTG AGGTCTTTTTGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTTTGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGTCATCTTTACCGCTGATCTCAGTGTTCCCCTGCATAACATTCACACAA ] [-] EMBL CD127819 [ GTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGGAGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACA ACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGTCATCTTTACCGATGATC ] [-] EMBL CD148075 [ TTCCGTCGGTTGAAATTCAGTGATGACACCCACACTATTTTTGTGATCCAAGGTTTGTACGCCCTCTGACATCCCCGGAGAGCTC ACCTCACGACTATGGTC TTGTCC CGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTATCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGTCATCTTTACCGCTGATCTCAGTGTTCGCCTGCATAACATTCACACAAGTAAAAAGCACACGCTTTTACCGAACTGAAAACA] [+] EMBL CD202606 [ CCCTCTGACATCCCCGGAGAGCTCAACCTNACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACGTGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAAAGACACAACCTCAGACTGCAAAAGGTTACGTCAATTGGGATTGATACAGAGGTCATCTTTACCGCTGATCTCAGTGTTCCCCTGCATAACATTCACACAAGTAAAAAGCACACGCTTTTACCGAACTGAAAA ] consensusID : consensus_11024#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [TTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGA] [+] EMBL CD116725 [TTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGACTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTGTGTTCCATGTAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGA] consensusID : consensus_11024#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence [TTATGAATTGATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAATGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATG] [+] EMBL CD137474 [TTATGAATTGATTTTGATGCCGAGTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCTACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACATGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTTATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCCACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACAAAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATTAATGTGACTTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGGATGTGGCATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11024#0 CTGAATTACTAAAGGAGAAGTTTCCATATGGACTAGATTATGAATTGATTTTGATGCCGA 60 consensus_11024#2 -------------------------------------TTATGAATTGATTTTGATGCCGA 23 consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 GTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCT 120 consensus_11024#2 GTAATATTTGCTGTAACCGAATGCTGCCACTGATGCACTGAGATAACTGGGCGTATAGCT 83 consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 ACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACA 180 consensus_11024#2 ACACACTGCCAAAGGAGATGTGGGATATTGGGACGCTACAGATTGTGGGAGTTTTGCACA 143 consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 TGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTT 240 consensus_11024#2 TGATTGTGAAATTAACGCTTCTGATCGGCGAAGATTATTTGGCTCAATGTTATTTATGTT 203 consensus_11024#1 -----------------------------------------------------TTATGTT 7 ******* consensus_11024#0 ATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCC 300 consensus_11024#2 ATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCC 263 consensus_11024#1 ATGGTGAAATGGTACCCCGAAATGGTGAATTTCGTTTCCAACAGAACGTATACTATTTCC 67 ************************************************************ consensus_11024#0 ACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACA 360 consensus_11024#2 ACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACA 323 consensus_11024#1 ACGTGTCACAGCAGAAAGTAGTGGGGAACTAGCTACCGGGGAATGAACGCCAGTGGTACA 127 ************************************************************ consensus_11024#0 AAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATT 420 consensus_11024#2 AAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATT 383 consensus_11024#1 AAATAAAGAAGATGGTGAACAGTTTGGGGAGCTTTTGACTTCAGTTTCCATTCTATCATT 187 ************************************************************ consensus_11024#0 AAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGAC 480 consensus_11024#2 AA----------------------------------------------------TGTGAC 391 consensus_11024#1 AAGTTCAGATTGCATAGAAACATGGATGTTGTAGTCAATGCCAGCATCTCGAGCTGTGAC 247 ** ****** consensus_11024#0 TTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGG 540 consensus_11024#2 TTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGG 451 consensus_11024#1 TTTATAACTAGAATTTTGACTGCAAACGTTTTGTGAGTGTGGTGAGGGGGATTTCGTTGG 307 ************************************************************ consensus_11024#0 ATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGA 600 consensus_11024#2 ATGTGGCATG-------------------------------------------------- 461 consensus_11024#1 ATGTGGCATGAATATGAGCTTATGGGGGACAGGAGCAGATCCAAAGTCCTGGGTGGCCGA 367 ********** consensus_11024#0 CTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTCTAAAACAGG 660 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 CTGCAACTCCTCTGATAAGTCGCCAACTGCGGAGTGTGCATACTGAATCTGTGTTCCATG 427 consensus_11024#0 ATCAACACTGGTTAATGAAGGCTGTGAATTTGTGCTACACTGTGTTCCATGTAGTTGATC 720 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 TAGTTGATCAGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTT 487 consensus_11024#0 AGACAGTTTTGCAGATTTCCACATACGCTTTGTAAACCACCTACGTAACTTTCGTGGACT 780 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 TCGTGGACTTGGATTGCTTGATCCAGAGTCGCTGCGTGA--------------------- 526 consensus_11024#0 TGGATTGCTTGATCCAGAGTCGCTGCGTAACATACCTGTCTCACCTTTGGTTAACAGTAC 840 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 AGAAGAATTATCAGTGCGAGATGTTTTGTTTCGCGGAGTTGAAAGTCTGCGTATCAAATT 900 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 AGTAAACAGTGACTTTCGATTCGGCGTATGCGATGAAATACAAGGTACTGAAGGTCTTTT 960 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 TGTGTTCGTGTCCTTATACAGAATATTAGGTTCTGACTCTTGATGTGGCACAGACCCGTT 1020 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 TGTAATGGTAGGACTACTTATTGGTGATTTGGTTCTAGAAGCTTCCGTCGGTTGAAATTC 1080 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 AGTGATGACACCCACACTATTTTTGTGATCCAAAGTTTGTACGCCCTCTGACATCCCCGG 1140 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 AGAGCTCAACCTCACGACTATGGTCTTTGTCCGCGGCTTTTCTTCAACAATATCAAGACG 1200 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 TGGTCTGTGAACAGATTGACTGTCTTTCAATCTCAATTTATCTGCTACTGGTGTAAAGAA 1260 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 AGACACAACCTCAGACTGCAAAAGGTTACGTCGATTGGGATTGATACAGAGGTCATCTTT 1320 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 ACCGCTGATCTCAGTGTTCCCCTGCATAACATTCACACAAGTAAAAAGCACACGCTTTTA 1380 consensus_11024#2 ------------------------------------------------------------ consensus_11024#1 ------------------------------------------------------------ consensus_11024#0 CCGAACTGAAAACA 1394 consensus_11024#2 -------------- consensus_11024#1 -------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||