These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11028#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1535 fasta sequence [TGATTGGCCCAGCCTGACCTTGGGGATTTTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA-TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC-CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC-AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC-AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAG--TTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGATAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATACCAGTCAAACAACAGGCCTGGTATGTCATAATCGTGTATCAGAAAAAATTCAAAAATTAGTCAACATTTTGAAACGTCCCAAACGATATCCATTACCCGAATATTTTCTTGATGATGAAGATCAAGTACTTGTAAGACCTGTTGTTGATCCTACGG] [+] EMBL CD097474 [TGATTGGCCCAGCCTGACCTTGGGGATTTTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGATCTTGAATTTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATTATTTAGGCCCACGCGGCCAGGCTGTTGGTTGGGGTGATAATGCTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTGCTATTAATGCTCAAAATCGCATATACA ] [-] EMBL CD067028 [ TTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAGAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCA ] [+] EMBL CD183366 [ TTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGT ] [+] EMBL CD097473 [ GACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTTACCAGTCATCGGGATTAA ] [+] EMBL CD188699 [ GATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGACACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAG ] [-] EMBL CD170674 [ GTCGTTCTCCAGAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAG ] [-] EMBL CD110924 [ ACGTTCTCTCCTGATGGGAAGTTCAGAGGAGTCCAGATCGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAGACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTCACAGAGTCTTTCAGACACGAGCCCCAAAAGTAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATCTCGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGATCGGCAGGAACGTCATGATcgc ] [+] EMBL CD067235 [ GAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCC ] [+] EMBL CD169692 [ AACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGACATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGACCATCA ] [-] EMBL CD128160 [ AAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGA ] [+] EMBL CD066379 [ TACCAAAAAAATAATCAAAGGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGCACTCAATGAAACGCATCATTT ] [-] EMBL CD066553 [ CTAAAATAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCA ] [-] EMBL CD160286 [ AAAATCATCGATATCGATCGGATATC CGAGAAGAGTCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTT ] [+] EMBL CD119986 [ AGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATGTGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTC ] [+] EMBL CD120125 [ GTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAACAAACAAT CCCTGCTAATCGATATGATGAAGTGCCTTCTCTAGATGAAATTCGATCCTCT ] [-] EMBL CD160125 [ AGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTT ] [-] EMBL CD141166 [ GGC TTAGTACAAAGCTCGGCAGGAACGTCATGATGCTNT GCACCTAGTAAACGTCGTGACNCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATG ] [-] EMBL CD066517 [ GATGCTNTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGAT ] [-] EMBL CD160365 [ TTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTATACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGA ] [-] EMBL CD160096 [ AACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCGGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTT ] [-] EMBL CD067128 [ TAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGAT ] [+] EMBL CD063656 [ aCGACAAATGGCGTTTCCGACAG AATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCA ] [+] EMBL CD136390 [ CAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACT ] [-] EMBL CD149465 [ ATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAG TTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATG ] [+] EMBL CD195517 [ GGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGCACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAGTTTTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCAT ] [-] EMBL CD195430 [ ACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCCGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAGTTTTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCT ] [+] EMBL CD066410 [ CATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGATAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATACCAGTCAAACAACAGGCCTGGTATGTCATAATCGTGTATCAGAAAAAATTCAAAAATTAGTCAACATTTTGAAACGTCCCAAACGATATCCATTACCCGAATATTTTCTTGATGATGAAGATCAAGTACTTGTAAGACCTGTTGTTGATCCTACGG] [+] EMBL CD067512 [ cgTGAGTTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGATAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATACCAGTCA ] consensusID : consensus_11028#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence [CAAATAGAATGAATCAATCAGATGTAAATAATCCATGGATTTACACAAACCAGCTTTATAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGTTCAGTTAAATTCTAATAATATAGGCATGTACGTTTATCTTGATTCCCACCTTGACAA] [-] EMBL CD066516 [CAAATAGAATGAATCAATCAGATGTAAATAATCCATGGATTTACACAAACCAGCTTTATAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGTTCAGTTAAATTCTAATAATATAGGCATGTACGTTTATCTTGATTCCCACCTTGACAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11028#0 TGATTGGCCCAGCCTGACCTTGGGGATTTTTTGACCTTTGAAGATGAAGGTCGTTCTCCA 60 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 TAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACG 120 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 AAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAG 180 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 AAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCA 240 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 TCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCAT 300 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 CATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGA 360 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 AACGAGCCCCAAAATAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAAT 420 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 CATCGATATCGATCGGATATCCGAGAAGAGGCAGTGAAGGAGGCTTTAGTACAAGCTCGG 480 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 CAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGT 540 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 ATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCA 600 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 TCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGT 660 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 GAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACA 720 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 TCAACTACTATTACTGGTCAGATACACAAACAACAATCCCCTGCTAATCGATATGATGAA 780 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 GTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATA 840 consensus_11028#1 -------------------------------------------------CAAATAGAATG 11 ********** consensus_11028#0 AATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAAT 900 consensus_11028#1 AATCAATCAGATGTAAATAATCCATGGATTTACACAAACCAGCTTTATAATCAACAAAAT 71 **************************** ************** ** ************* consensus_11028#0 GGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCT 960 consensus_11028#1 GGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCT 131 ************************************************************ consensus_11028#0 GAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAAT 1020 consensus_11028#1 GAAGTTCAGTTAAATTCTAATAATATAGGCATGTACGTTTATCTTGATTCCCACCTTGAC 191 **** ************************ ******* ***** **** * ** * consensus_11028#0 ACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAAT 1080 consensus_11028#1 AA---------------------------------------------------------- 193 * consensus_11028#0 TCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGT 1140 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 GTGCTCCCTAGTTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGA 1200 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 ATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCA 1260 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 GTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGA 1320 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 TAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATAC 1380 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 CAGTCAAACAACAGGCCTGGTATGTCATAATCGTGTATCAGAAAAAATTCAAAAATTAGT 1440 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 CAACATTTTGAAACGTCCCAAACGATATCCATTACCCGAATATTTTCTTGATGATGAAGA 1500 consensus_11028#1 ------------------------------------------------------------ consensus_11028#0 TCAAGTACTTGTAAGACCTGTTGTTGATCCTACGG 1535 consensus_11028#1 ----------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||