These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11035#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 649 fasta sequence [ATCCCAAGACACGGCGAGTCTGCTAATGGATGTAAGAAAGCCAAGTGCGAACCATTGGTGTTACGAATGTGGGTCGCCAAATCCTCAGCGGGCTAGCGTTACATATGGCATTAGGATATGTTTACGAGTGTGCATGGCAAACACATCTGTGGCATGAGGGAGAGTTGCAATATTAAGCTTCTCTGTCTCTGCATCCAAATTCAGACAATGGTACTAACATCGGGAAGTGACATCTGGACATTCGTGACAAAACATAGATAACGCTCTGGTAGCGCAGACGAGAACATCGCTTAACGGACGTCTTTCTCCGTTCTGCAACACCACCGTGATACTTTACAGNANCTCTNCTAGATAGGTAGCTCTGTTCAAAGAAACCGAGTGACAGATAATCTATCAGACTAGCTCGCATTCTGTCAGAGGAGTATCAACGACTTGCGACACTGAAGCCGTCGTGAGTGACAGGTGTGCGGAGTGAAGGAAAAGTCGCCAAGTGGGCGTAACTAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCTGCCATTCA] [+] EMBL CD065765 [ATCCCAAGACACGGCGAGTCTGCTAATGGATGTAAGAAAGCCAAGTGCGAACCATTGGTGTTACGAATGTGGGTCGCCAAATCCTCAGCGGGCTAGCGTTACATATGGCATTAGGATATGTTTACGAGTGTGCATGGCAAACACATCTGTGGCATGAGGGAGAGTTGCAATATTAAGCTTCTCTGTCTCTGCATCCAAATTCAGACAATGGTACTAACATCGGGAAGTGACATCTGGACATTCGTGACAAAACATAGATAACGCTCTGGTAGCGCAGACGAGAACATCGCTTAACGGACGTCTTTCTCCGTTCTGCAACACCACCGTGATACTTTACAGNANCTCTNCTAGATAGGTAGCTCTGTTCAAAGAAACCGAGTGACAGATAATCTATCAGACTAGCTCGCATTCTGTCAGAGGAGTATCAACGACTTGCGACACTGAAGCCGTCGTGAGTGACAGGTGTGCGGAGTGAAGGAAAAGTCGCCAAGTGGGCGTAACTAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCTGCCATTCA] consensusID : consensus_11035#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 632 fasta sequence [AACTTTGGATGGCTAGCATGACACGGCGAGTGCTAATGGATGTCAAGAAAGCCAATGCGAACCATTTGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGGGCTAGCGTTACATATGGCATTTGGATATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA-TAGTAAAGCTGCTGCTTTGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGA-AACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCT-GCCATTCAGACTTGGAATCCTGGTTAAAGGATACAATCTTATCTGAGGAGCATGATTCATTTACAACACCAGC-ACAAAGACAACTAACA] [+] EMBL CD065502 [AACTTTGGATGGCTAGCATGACACGGCGAGTGCTAATGGATGTCAAGAAAGCCAATGCGAACCATTTGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGGGCTAGCGTTACATATGGCATTTGGATATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGCTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAACTAGTAAAGCTGCTGCTTTGTAGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTCGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATACATCATGTAAAAACAACCG ] [+] EMBL CD065525 [ gcccaagGACACGGCGAGTGCTAATGGATGTCAAGAAAGCCAATGCGAACCATTGGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGGGCTAGCGTTACATATGGCATTTGGCTATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATCGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTCGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTGGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGA AACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC ] [-] EMBL CD201064 [ TAATGGATGTCAAGAAAGCCAATGCGAACCATTTGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGGGCTAGCGTTACATATGGCATTTGGATATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTTGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAA ] [-] EMBL CD113907 [ AAATCCTCAGTGGGCTAGCGTTACATATGCCATTTGTATATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTTGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGA AACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCT GCCATTCAGACTTGGAATCCTGGTTAAAGGATACAATCTTATCTGAGGAGCATGATTCATTTACAACACCAGC ACAAAGACAACTAACA] [-] EMBL CD065702 [ GTGGGCTAGCGTTACATATGGCATTTGGATATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTTGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATACATCTACCAGTATAAATCATGTACAGACCACCGGTGATCTGCCATCTTGATCCTCAGATAAACGA AACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCTCACCATTCAGACTTGGAATCCTGGTTAAAGACTACAATCTTATCTGAGGAGCATGATTCATTTACAACACCAGCAACAAAGACAAC ] [-] EMBL CD113844 [ TAGCTTTACATATGTCATTTGAATATNTTTAGAGTTTTCAGGAAAACATCGTGGATTGGGGNTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTTGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGA AACTTTCATGGTAATCAGACTAATTATCAAGCTCCTGATTATTATCCTGGATCAACCAAAATGACCAGCT CCATT ] [+] EMBL CD113768 [ TATG TTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTAGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTTGTT GAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGA AACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGACCAAACAAAATGACCAGCT GCCAT ] [-] EMBL CD087862 [ CAGGAATACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTTGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGACAAGGGTCATGc ] [+] EMBL CD068256 [ AGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAA TAGTAAAGCTGCTGCTTTGTTGAGAGATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGAAGAAGTCGCTAATGTGCGTAATAATAAATCTACCAGTATAAATCATGTAAAAACAA ] [-] EMBL CD128502 [ GTAATAATACATCTACCAGTATAAATCATGTAAAGACCACCGGTGATCTCCCATCTTTATCCTCAGATAAACGA AACTTTCATGGTAATCA ] consensusID : consensus_11035#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 570 fasta sequence [GGTGGTACTCACTGTT-CATAT-GTGCAT-T-CGTGATATG-TTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA-AGCTGCTGCTTTGTTGAGA-GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA-AGA-AGTCGCTAATGTGCGTAATAATAAA-TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT-TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC-TGGATCAAACAAAATGACCAGCTGCCATTCAGAC-TTGGAATCC-TGGTTA-AAGGATACAA-TCTTATCTG-AGGAG-CATGATTCATTTACAACACCAGCAACAAAGACAACAACTACTTCTGCTAATACACGTTATGATAAGTTCC] [+] EMBL CD113779 [GGTGGTACTCACTGTT CATAT GTGCAT T CGTGATATG TTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAAGCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTT GA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGACCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG GGGAG CATGATTCATTTGCAACACCAGCAACAAAGACAACAACTACTTCTGCTAATACACGTTATGA ] [+] EMBL CD113816 [ GTACT AATGTT CATA TGCAT T TGCGGTATG TATAGAGTG TCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACACCCTGATTACAGACCTCAGTGGAGTTTTCACGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGACGACTAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGACAGACAGTCGCTAATGTGCGTAATAATAAACTCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTA ] [+] EMBL CD113895 [ TGTTACATAT GTGCATCT CGTGATATG TTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGACTTTGGAATCCTTGGTTACAAGGATACAACCCTTATCTGAAGGAG CATGATTCATTTACAACACCAGCAACAAAGACAACAACTACTTCTGCTAATACACGTTATGA ] [+] EMBL CD113717 [ TT CATATCGTGCAT TCCGTGATATG ATTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAAGCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGCAACAAAGACAACAACTACTTCTGCT ] [+] EMBL CD113870 [ TAT GTGCAT C CG GATATG TTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCCTTGGAT ] [+] EMBL CD113715 [ c GTGCAT C CGTG TATG ATTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCGAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGCAACAAAGACAACAACTACTTCTGCTAATACACGTTATG ] [+] EMBL CD113749 [ catcc CGTG TATGATTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCGAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTC AAGGATACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGCAACAAAGACAACAACTACTTCTGGTAATACACGTTATGA ] [+] EMBL CD113780 [ AGTGTTCAGGAAAACATCGTGGA TGGGGG TCATTTAAG TATGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTCGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGCAACAAAGACAACAACTACTTCTGCTAATACACGTTATG ] [-] EMBL CD065733 [ GGAAAACATCGTGGATTGGGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATAC A TCTTATCTG AGGAG CATGATTCATTTACAACACCAGC ACAAAGACAACAACTACTTCTGCT ATACA ] [-] EMBL CD065609 [ AACATCGTGGATTGGGGCTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCAGGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATAC A TCTTATCTG AGGAG CATGATTCATTTACAACACCAGC ACAAAGACAACAACTACTTCTGCT ATACA ] [-] EMBL CD113875 [ TCGTGGATT GGGGTTCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAGGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA CCTTATCTG AGGAG CATGATTCATTTACAACACCAGC ACAAAGAC ACTACTACTg ] [-] EMBL CD065688 [ TCATTTAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAAGTGGAAAAAATGAAAGTTGGAGCCTACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACCATAGTAACAGCTGCTGCTTTGTTGAGA GAT AGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTCAAAACAACCGGTGATCTGCCATCTCTTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAGAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG AGCAGACATGATTCATTTACAACA CAGCAACAAAGACAACAACTACTTCT CTAATACACGTTATGATAAGTTCC] [-] EMBL CD113874 [ CAATTAACATGGATAAATGGAAGGAATTGGAATTGGAAAAAATGAAAGTTGGAGTCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGCAACAAAGACAATAACTACTTGTG ] [-] EMBL CD128377 [ AAAGTTGGAGGCAACAGACATGCTAAGGAGTTTTTCGTCTCACAACCTGATTACAGACCTCAGTGGAGTTTTCAAGAAAAGTACAATAGTAA AGCTGCTGCTTTGTTGAGA GATAAGATTGCAACTGAAGCGTCTGGTGAGGTTTGGGATGA AGA AGTCGCTAATGTGCGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGC ACAAAGAC ACAACTACTTCTGTTAATACA ] [-] EMBL CD195365 [ CGTAATAATAAA TCTACCAGTATAAATCATGTAAAAACAACCGGTGATCTGCCATCT TTATCCTCAGATAAACGAAACTTTCATGGTAATCAGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA CCTTATCTG AGGAG CATGATTCATTTACAACACCAGCAACAAAG ] [-] EMBL CD128471 [ AGACTAATTATCAAGCCCCTGATTATTATCC TGGATCAAACAAAATGACCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGTTACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGC ACAAAGACAACAACTACTTCTGCTA ACACGTTATGATAAGT ] [-] EMBL CD128332 [ CCAGCTGCCATTCAGAC TTGGAATCC TGGTTA AAGGATACAA TCTTATCTG AGGAG CATGATTCATTTACAACACCAGCAACAAAGACAACAACTACTTCTGCTAATACA ] consensusID : consensus_11035#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 229 fasta sequence [GCCCAAGGACACGGCGAGTGCTAATGGATGTCAAGAAAGCCAATGCGAACCATTTGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGGGCTAGCGTTACATATGGCATTTGGATATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATATAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGATTGGAATTGAAAAAAGTTCCGTGAGCCGTCG] [-] EMBL CD065652 [GCCCAAGGACACGGCGAGTGCTAATGGATGTCAAGAAAGCCAATGCGAACCATTTGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGGGCTAGCGTTACATATGGCATTTGGATATGTTTAGAGTGTTCAGGAAAACATCGTGGATTGGGGGTTCATATAAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGATTGGAATTGAAAAAAGTTCCGTGAGCCGTCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11035#0 ------------ATCCCAAGACACGGCGAGTCTGCTAATGGATGT-AAGAAAGCCAAGTG 47 consensus_11035#3 ------------GCCCAAGGACACGGCGAG--TGCTAATGGATGTCAAGAAAGCCAA-TG 45 consensus_11035#1 AACTTTGGATGGCTAGCATGACACGGCGAG--TGCTAATGGATGTCAAGAAAGCCAA-TG 57 consensus_11035#2 ------------------------------------------------------------ consensus_11035#0 CGAACCATTGGTGTTACGAATGTGGGTCGCCAAATCCTCAGCGG-GCTAGCGTTACATAT 106 consensus_11035#3 CGAACCATTTGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGG-GCTAGCGTTACATAT 104 consensus_11035#1 CGAACCATTTGTGTTTTGAATGTGGGTCGCCAAATCCTCAGTGG-GCTAGCGTTACATAT 116 consensus_11035#2 ---------------------------------------GGTGGTACTCACTGTTCATAT 21 * ** ** * * ***** consensus_11035#0 G-GCATTAG-GATATGTTTACGAGTGTGCATGGCAAACACATCTGTGGCATGAGGGAGAG 164 consensus_11035#3 G-GCATTTG-GATATGTTTA-GAGTGTTCAGG---AAAACATC-GTGGATTGGGGGT--- 154 consensus_11035#1 G-GCATTTG-GATATGTTTA-GAGTGTTCAGG---AAAACATC-GTGGATTGGGGGT--- 166 consensus_11035#2 GTGCATTCGTGATATGTTTA-GAGTGTTCAGG---AAAACATC-GTGGATTGGGGGT--- 73 * ***** * ********** ****** ** * ** ***** **** ** *** consensus_11035#0 TTGCAATATTAAGCTTCTCTGTCTCTGCATCCAAATTCAGACAATGGT-ACTAACATCGG 223 consensus_11035#3 ---TCATAT-AAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAG--ATTGGAATTGA 208 consensus_11035#1 ---TCATTT-AAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGG 222 consensus_11035#2 ---TCATTT-AAGTTTTGTTCGCTCAATTAACATGGATAAATGGAAGGAATTGGAATTGG 129 ** * *** ** * *** ** * * * * * ** * consensus_11035#0 GAAGTGACATCTGGACATTCGTGACAAAACATAGATAACGCTCTGGTAGCGCAGACGAGA 283 consensus_11035#3 AAAAAGTTCCGTGAGCCGTCG--------------------------------------- 229 consensus_11035#1 AAAAAA-----TGAAAGTTGGAGGCAACAGACA----------------TGCTAAGGAG- 260 consensus_11035#2 AAAAAA-----TGAAAGTTGGAGGCAACAGACA----------------TGCTAAGGAG- 167 ** ** * * consensus_11035#0 ACATCGCTTAACGGACGTCTTTCTCCGTTCTGCAACACCACCGTGATACTTTACAGNANC 343 consensus_11035#3 ------------------------------------------------------------ consensus_11035#1 --------------------TTTTTCGTCTCACAACCTGATTAC-AGACCTCAGTGGAGT 299 consensus_11035#2 --------------------TTTTTCGTCTCACAACCTGATTAC-AGACCTCAGTGGAGT 206 consensus_11035#0 TCTNCTAGATAGGTAGCTCTGTTCAAAGAAACCGAGTGACAGATAATCTATCAGACTAGC 403 consensus_11035#3 ------------------------------------------------------------ consensus_11035#1 TTTC---------------------AAGAAA-------------AGTACAATAGTAAAGC 325 consensus_11035#2 TTTC---------------------AAGAAA-------------AGTACAATAGTAAAGC 232 consensus_11035#0 TCGCATTCTGTCAGAGGAGTATCAACGACTTGCGACACTGAAGCCGTCGTGAGTGACAGG 463 consensus_11035#3 ------------------------------------------------------------ consensus_11035#1 TGCTGCTTTGTTGAGAGA--------------TAAGATTGCAACTG----AAGCGTCTGG 367 consensus_11035#2 TGCTGCTTTGTTGAGAGA--------------TAAGATTGCAACTG----AAGCGTCTGG 274 consensus_11035#0 TGTGCGGAGTGAAGGAAAAGTCGCCAAGTGGGCGTAACTAATAAATCTACCAGTATAAAT 523 consensus_11035#3 ------------------------------------------------------------ consensus_11035#1 TGAGGTTTGGGATGAAGAAGTCGCTAA-TGTGCGTAA-TAATAAATCTACCAGTATAAAT 425 consensus_11035#2 TGAGGTTTGGGATGAAGAAGTCGCTAA-TGTGCGTAA-TAATAAATCTACCAGTATAAAT 332 consensus_11035#0 CATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGAAACTTTCATGGT 583 consensus_11035#3 ------------------------------------------------------------ consensus_11035#1 CATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGAAACTTTCATGGT 485 consensus_11035#2 CATGTAAAAACAACCGGTGATCTGCCATCTTTATCCTCAGATAAACGAAACTTTCATGGT 392 consensus_11035#0 AATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCTGC 643 consensus_11035#3 ------------------------------------------------------------ consensus_11035#1 AATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCTGC 545 consensus_11035#2 AATCAGACTAATTATCAAGCCCCTGATTATTATCCTGGATCAAACAAAATGACCAGCTGC 452 consensus_11035#0 CATTCA------------------------------------------------------ 649 consensus_11035#3 ------------------------------------------------------------ consensus_11035#1 CATTCAGACTTGGAATCCTGGTTAAAGGATACAATCTTATCTGAGGAGCATGATTCATTT 605 consensus_11035#2 CATTCAGACTTGGAATCCTGGTTAAAGGATACAATCTTATCTGAGGAGCATGATTCATTT 512 consensus_11035#0 ---------------------------------------------------------- consensus_11035#3 ---------------------------------------------------------- consensus_11035#1 ACAACACCAGCACAAAGACAACTAACA------------------------------- 632 consensus_11035#2 ACAACACCAGCAACAAAGACAACAACTACTTCTGCTAATACACGTTATGATAAGTTCC 570 |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||