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Schistosoma mansoni
cluster # 11038 cluster # 11038       Sequences # 29       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11038#0 length = 519 sequences # 25  
consensus_11038#1 length = 437 sequences # 3  
consensus_11038#2 length = 304 sequences # 1  

consensusID : consensus_11038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 25
consensus length = 519
fasta sequence
                              [TTTCGACTTCTAGCTCTCGATGGGGTTCTCCGAAGGTGATATTGAGAAAGGAAAGAAGCTATTCGTTCAGAGATGTAGTCAGTGTCATACC-GTCGAGAAGGGTGGTCCTCACAAAGTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA-G-CTCCT-GGGTATACCT-ACACTGCTG-CCAACATAAGTAAAGGTATCATAT-GGAATGAGCAG-TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT-CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA-TTC-TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAGTCAATATACTATGATAATTCAAAAAAAA]

[-] EMBL CD165417             [TTTCGACTTCTAGCTCTCGATGGGGTTCTCCGAAGGTGATATTGAGAAAGGAAAGAAGCTATTCGTTCAGAGATGTAGTCAGTGTCATACC GTCGAGAAGGGTGGTCCTCACAAAGTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA G CTCCT GGGTATACCT TCCCCGCTG CCAACATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGA                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD165425             [TTTCGACTTCTAGTTCTCGATGGGGTTCTCCGAAGGTGATATTGAGAAAGGAAAGAAGCTATTCCGTCAGAGATGTAGTCAGTGTCATACC GTCGAGAAGGGTGGTCCTCACAAAGTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA G CTCCT GGGTATACCT ACACTGCTG CCAACATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTT                                                                                                                                                                                                         ]
[+] EMBL AA559772             [                       GGTTCTCCGAAGGTGATATTGAGAAAGGAAAGAAGCTATTCGTTCAGAGATGTAGTCAGTGTCATACC GTCGAGAAGGGTGGTCCTCACAAAGTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA G CTCCT GGGTATACCT ACACTGCTG CCAACATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAANAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAANCAACAAAATAAGAA                                                                                                                                                                            ]
[+] EMBL AA864173             [                        GTTCTCCGAA GTGATATTGAGAAAGGAAAGAAGCTATTCGTTCAGAGATGTAGTCAGTGTCATACC GTCGAGAAGGGTGGTCCTCACAAAGTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA   CTCCT GGGTATACCT ACACTGCTG CCAACATAAGTAAAGGTATCATATGGGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCG                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD111635             [                            TCCGAAGGTGATATTGAGAAAGGAAAGAAGCTATTCGTTCAGAGATGTAGTCAGTGTCATACC GTCGAGAAGGGTGGTCCTCACAAAGTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA G CTCCT GGGTATACCT ACACTGCTG CCAACATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCAATTTGAGTATTTGGAANATCCGA                                                                                                                                                                                                                                                                                  ]
[+] EMBL AA559385             [                                      ATATTGANANTGGAAAGAANCTATTCNTNCAGAGATGTAGTCCGTGTCATNCC GTCGAGAAGGGTGGTCCTCACAAANTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA G CTCCT GGGTATACCT ACACTGCTG CCAACNTANGTAAAGGTATCCTAT GGAATGAGCNG TCTCTATTTG                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AA952849             [                                                                       GATGTAGTCAGTGTCATACCTGTCGAGAAGGGTGGTCCTCACAAAGTGGGACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAATG CTCCT GGGTATACCT ACTCTGCTG CCAACATAAGTAAAGGTATCATA  GGAATGAG AGCTCTCTATTTGAGTATTTGGAAAtt                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD140371             [                                                                                                                          CCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAA G CTCCT GGGTATACCT ACACTGCTG CCAACATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGA                                                                      ]
[+] EMBL AF030972             [                                                                                                                                                              CAA GTTTCCTGGGGTATACCTAACACTGCTGCCCAACATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTATCCCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTT CGTATTTCTGATCTCTTCTGAAGTCAATATACTATGATAATTCAAAAAAAA]
[+] EMBL CD136663             [                                                                                                                                                                                            cG CCTTCATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAA                             ]
[-] EMBL CD134145             [                                                                                                                                                                                               ccttCATAAGTAAAGGTATCATAT GGAATGAGCAG TCTCTATTTGAGTCTTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGTCTCTGATCGCAAGGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATATACCTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGGGAAAATAAATACTCTTGTct                                                    ]
[+] EMBL CD120278             [                                                                                                                                                                                                                ATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAA                             ]
[+] EMBL CD136883             [                                                                                                                                                                                                                ATCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTG AAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAA                             ]
[-] EMBL CD120277             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAG                            ]
[-] EMBL CD092383             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCTGAAAGAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAGTACTCTTGTTTGCGTATTTCTGATCTCTTCCGAAGTCAATATACTGTGAaggc          ]
[-] EMBL CD157984             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAG                            ]
[-] EMBL CD092301             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTCCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAG                            ]
[-] EMBL CD092479             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATATCCTACCTTAAAAAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGATCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGGGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATGTATTCTGAAG                            ]
[-] EMBL CD092325             [                                                                                                                                                                                                               atTCAT T TGAATGAGCAG TCTCTATTTGAGTATTTGGAAAAACCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACC TAAAGAAGCAACAAAATAAGAATATTTCTTAAATTTCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCATCTGAAGTC                          ]
[-] EMBL CD092318             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAGTC                          ]
[-] EMBL CD092403             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCCTCAGAAGTC                          ]
[-] EMBL CD092434             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCATCTGAAGT                           ]
[-] EMBL CD092464             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAAACCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAG                            ]
[-] EMBL CD120406             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCCAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCACAGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTTACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAG                            ]
[-] EMBL CD120049             [                                                                                                                                                                                                                 TCATAT GGAATGAGCAG TCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTAT CCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATA TTC TAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCTTCTGAAG                            ]


>consensus_11038#0 TTTCGACTTCTAGCTCTCGATGGGGTTCTCCGAAGGTGATATTGAGAAAGGAAAGAAGCT ATTCGTTCAGAGATGTAGTCAGTGTCATACCGTCGAGAAGGGTGGTCCTCACAAAGTGGG ACCCAACTTAAGTGGTCTGTTTGGTCGTAAAACTGGTCAAGCTCCTGGGTATACCTACAC TGCTGCCAACATAAGTAAAGGTATCATATGGAATGAGCAGTCTCTATTTGAGTATTTGGA AAATCCGAAAAAGTTTATCCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACAC TGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATATTCTAAATA TCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAA ACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGAT CTCTTCTGAAGTCAATATACTATGATAATTCAAAAAAAA



consensusID : consensus_11038#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 437
fasta sequence
                              [TATCGCATTAACCATCAATAGGTTTGTTAATTCATTTAATATTTATTAAAGCAAGTCAAGTACTTAAGGTGAAAACATCTTTTGGCTTCTTTATTTCGTTGAACCACTATTTCCACTTATAGTATTAATTCTTTCATTATTGCTTAGGTATCATATGGAATGAGCAGTCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTATCCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATATTCTAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTAAAAAAAAAAAAAAAAAAA]

[-] EMBL AI395467             [TATCGCATTAACCATCAATAGGTTTGTTAATTCATTTAATATTTATTAAAGCAAGTCAAGTACTTAAGGTGAAAACATCTTTTGGCTTCTTTATTTCGTTGAACCACTATTTCCACTTATAGTATTAATTCTTTCATTATTGCTTAGGTATCATATGGAATGAGCAGTCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTATCCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATATTCTAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTAAAAAAAAAAAAAAAAAAA]
[-] EMBL CD092331             [                                                                                                                                                      TCATATGGAATGAGCAGTCTCTATTTGAGTATTTGGAAAATCCGAAAAAGTTTATCCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATATTCTAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTA                                                                                       ]
[+] EMBL SMAA43872            [                                                                                                                                                                     AGTCTCTATTTGAGTATTTGGNAAATCCGAAAAAGTTTATCCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGAAAGACACTGATTGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATATTCTAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATGTATAGAAACATAAAGCC                                                            ]


>consensus_11038#1 TATCGCATTAACCATCAATAGGTTTGTTAATTCATTTAATATTTATTAAAGCAAGTCAAG TACTTAAGGTGAAAACATCTTTTGGCTTCTTTATTTCGTTGAACCACTATTTCCACTTAT AGTATTAATTCTTTCATTATTGCTTAGGTATCATATGGAATGAGCAGTCTCTATTTGAGT ATTTGGAAAATCCGAAAAAGTTTATCCCTGGTACAAAGATGGTCTTTGCTGGTTTAAAGA AAGACACTGATCGCAATGATATCATTTCCTACCTTAAAGAAGCAACAAAATAAGAATATT CTAAATATCTGATTTCTAGATTTTACTTTGTTGTAGCAGTTCTTTAATTAACTTGATATG TATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTAA AAAAAAAAAAAAAAAAA



consensusID : consensus_11038#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 304
fasta sequence
                              [ATCATTTTGAATGAGCAGTCTCTATTTGAGTATTTTGAAAATCCGAAAAGAGTTTATTCCCTGGTACAAAGATTGGTTCTTTGCTTGGTTTAAAAGAAAGACACTGATTCGCAAATGATATTCATTTTCCTACCCTTAAAGAAGCAACCAAAATTAAGAAGATTTCTAAATGTCTGATTTTCTAGATTTTTACTTTGTTGTAGCAGTTCTTTGATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCATCGAAG]

[-] EMBL CD092400             [ATCATTTTGAATGAGCAGTCTCTATTTGAGTATTTTGAAAATCCGAAAAGAGTTTATTCCCTGGTACAAAGATTGGTTCTTTGCTTGGTTTAAAAGAAAGACACTGATTCGCAAATGATATTCATTTTCCTACCCTTAAAGAAGCAACCAAAATTAAGAAGATTTCTAAATGTCTGATTTTCTAGATTTTTACTTTGTTGTAGCAGTTCTTTGATTAACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCATCGAAG]


>consensus_11038#2 ATCATTTTGAATGAGCAGTCTCTATTTGAGTATTTTGAAAATCCGAAAAGAGTTTATTCC CTGGTACAAAGATTGGTTCTTTGCTTGGTTTAAAAGAAAGACACTGATTCGCAAATGATA TTCATTTTCCTACCCTTAAAGAAGCAACCAAAATTAAGAAGATTTCTAAATGTCTGATTT TCTAGATTTTTACTTTGTTGTAGCAGTTCTTTGATTAACTTGATATGTATAGAAACATAA AGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTTGTTTGCGTATTTCTGATCTCATC GAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11038#0      TTTCGACTTCTAGCTCTCGATGGGGTTCTCCGAAGGTGATATTGAGAAAGGAAAGAAGCT 60
consensus_11038#2      ------------------------------------------------------------
consensus_11038#1      ---------------------------------------TATCGCATTAACCATCAATAG 21
                                                                                   

consensus_11038#0      ATTCGTTCAGAGATGTAGTCAGTGTCATACCGTCGAGAAGGGTGGTCCTCACAAAGTGGG 120
consensus_11038#2      ------------------------------------------------------------
consensus_11038#1      GTTTGTTAATTCATTTAATATTTATTAAAGC------AAGTCAAGTACTTA--AGGTGAA 73
                                                                                   

consensus_11038#0      ACCCAACTTAAGTGGTCTGTTTGGT-CGTAAAACTGGTCAAGCTCCTGGGTATACCTACA 179
consensus_11038#2      ------------------------------------------------------------
consensus_11038#1      AACATCTTT---TGGCTTCTTTATTTCGTTGAACCACT---ATTTCCACTTATAGTATTA 127
                                                                                   

consensus_11038#0      CTGCTGCCAACATAAGTAAAGGTATCATATGGAATGAGCAGTCTCTATTTGAGTATTTGG 239
consensus_11038#2      -----------------------ATCATTTTGAATGAGCAGTCTCTATTTGAGTATTTTG 37
consensus_11038#1      ATTCTTTCATTATT-GCTTAGGTATCATATGGAATGAGCAGTCTCTATTTGAGTATTTGG 186
                                              ***** * *************************** *

consensus_11038#0      AAAATCCGAAAA-AGTTTAT-CCCTGGTACAAAGATGG--TCTTTGCT-GGTTTAAA-GA 293
consensus_11038#2      AAAATCCGAAAAGAGTTTATTCCCTGGTACAAAGATTGGTTCTTTGCTTGGTTTAAAAGA 97
consensus_11038#1      AAAATCCGAAAA-AGTTTAT-CCCTGGTACAAAGATGG--TCTTTGCT-GGTTTAAA-GA 240
                       ************ ******* *************** *  ******** ******** **

consensus_11038#0      AAGACACTGAT-CGCAA-TGATATCA--TTTCCTACC-TTAAAGAAGCAACAAAA--TAA 346
consensus_11038#2      AAGACACTGATTCGCAAATGATATTCATTTTCCTACCCTTAAAGAAGCAACCAAAATTAA 157
consensus_11038#1      AAGACACTGAT-CGCAA-TGATATCA--TTTCCTACC-TTAAAGAAGCAACAAAA--TAA 293
                       *********** ***** ******    ********* ************* ***  ***

consensus_11038#0      GAATATT-CTAAATATCTGATTT-CTAGATTTT-ACTTTGTTGTAGCAGTTCTTTAATTA 403
consensus_11038#2      GAAGATTTCTAAATGTCTGATTTTCTAGATTTTTACTTTGTTGTAGCAGTTCTTTGATTA 217
consensus_11038#1      GAATATT-CTAAATATCTGATTT-CTAGATTTT-ACTTTGTTGTAGCAGTTCTTTAATTA 350
                       *** *** ****** ******** ********* ********************* ****

consensus_11038#0      ACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTT 463
consensus_11038#2      ACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTT 277
consensus_11038#1      ACTTGATATGTATAGAAACATAAAGCCTGAGCTTCCGAGTACGTGAAAATAAATACTCTT 410
                       ************************************************************

consensus_11038#0      GTTTGCGTATTTCTGATCTCTTCTGAAGTCAATATACTATGATAATTCAAAAAAAA 519
consensus_11038#2      GTTTGCGTATTTCTGATCTCATC-GAAG---------------------------- 304
consensus_11038#1      GTTTGCGTAAAAAAAAAAAAAAAAAAA----------------------------- 437
                       *********      *         **                             




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)