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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11041#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1395 fasta sequence
[TTCACAGGTCGGGATAAATATTTTGGCAGACTGGAATAAATCTATCAATCATTTTGTACTTGTATTTCCACGAGATTATAGGAATGCATTGGCCAAACTTAAAGCTTCCACAACTGCTACTGATCCCAAGACACAAACTACAGATATTGAAGATGTAATTAATGATGAGCCAACAGAGAAACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG-AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATGGCGTTAAGTTTGAGCTAAATACACGCGTCGGTAATGATGGCCAACCTTCAGAACCCAGAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA-CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA-CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG-GGGTGACACAGGTGTT-GATT-GTATTGCTACATC-TGTACGCCATGG-AGCCGAAAATATTCGTGTGTTTGAGA-TTCTCCCACCGCCACCAACTACTCGTGATATTAATGAAAATCCATGGCCTGAATGGCCTCGCATATGGAGAGTAGATTATGGGCACTCAGAGGTTGCTGTTCGTATAAATGGAGACCCAAGACAATTTAATACAATAACTAAAGAATT]
[+] EMBL AI975185 [TTCACAGGTCGGGATAAATATTTTGGCAGACTGGAATAAATCTATCAATCATTTTGTACTTGTATTTCCACGAGATTATAGGAATGCATTGGCCAAACTTAAAGCTTCCACAACTGCTACTGATCCCAAGACACAAACTACAGATATTGAAGATGTAATTAATGATGAGCCAACAGAGAAACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCAC ]
[+] EMBL CD187186 [ AAACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGATGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATA ]
[+] EMBL CD180872 [ ACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCACGCTGCTCATACTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTATTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGA ]
[+] EMBL CD121377 [ GAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTT GGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGATGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTGGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGT ]
[-] EMBL CD069865 [ TACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAAGGGCGTTAAGTTTGAGCTAAATACAAGC ]
[-] EMBL CD069890 [ TACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTGATGGCGTTAAGTTTGAGCTAAAT CACGC ]
[-] EMBL CD069794 [ TACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTGATGGCGTTAAGTTTGAGCTAAATAAACGC ]
[-] EMBL CD125632 [ CCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAGCCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCG ]
[-] EMBL CD193547 [ GTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTGGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGTTCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATGGCGTTAAGTTTGAGCTA ]
[+] EMBL CD163801 [ AAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATG AGAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATGGCGTTAAGTTTGAGCTAAATACACGCGTCGGTAATGATGGCCAACCTTCAGAACCCAGAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAG ]
[+] EMBL CD150564 [ atgTCCTCGTGTATAATCGTATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATGGCGTTAAGTTTGAGCTAAATACACGCGTCGGTAATGATGGCCAACCTTCAGAACCCAGAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATACAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTACCTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAACCGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCT ]
[+] EMBL AI395067 [ ACACGCGTCGGTAATGATGGCCAACCTTCAGAACCCAGAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTCGTGGCGGGTGACACAGGTGTTCGATTGGTATTGCTACATCTTGTACGCCATGGTAGCCGAGAATATT ]
[+] EMBL AI068323 [ GAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCACCAACTACTCGTGATATTAATGAAAATCCAT ]
[+] EMBL AI067808 [ GAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCA CGGCACCAACTACTC ]
[+] EMBL AI067850 [ GAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCACCAAC ]
[+] EMBL AI068062 [ GAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCAC ]
[+] EMBL AI067435 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCNCACCGCCACCAACTACTCGTGATATTAATGAAAATCCATGGCCTGAATGGCCTCGCATATGGAGAGTAGATTATGGGCACTCAGAGGTTGCTGTTCGTATA ]
[+] EMBL AI067606 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCACCAACTACTC ]
[+] EMBL AI068312 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAAGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGATTTCTCCANNCG CATCAACTACTCGTGATATTAATGAAAATCCATGGC ]
[+] EMBL AI068307 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATA TCGTGTGTTTGAGA TTCT CCACCGCCA CAACTACTCGTGATATTAATGAAAATCCATGGC ]
[+] EMBL AI068061 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCACCAACTACTCGTGATATTAATG ]
[+] EMBL AI068014 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCACCAACTACTCGTGATATTAATGAAAATCCATGGCCTGAATGGCCTCGCATATGGAGAGTAGATTATGGGCACTCAGAGGTTGCTGTTCGTATAAATGGAGACCCAAGACAATTTAATACAATAACTAAAGAATT]
[+] EMBL AI067080 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAAT ]
[+] EMBL AI067226 [ TAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTTTATGTTTGGGTGCTA CTTGGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATAATCGTGTGTTTGAGA TTCTCCCACCGCCACCAACTACTCGTGATATTAATGAAAATCCATGGCCTGAATGGCCTCGCATATGGAGAGTAGATTATGGGCACTCAGACGTTGCTGTTCGTATAAA ]
[-] EMBL BG932900 [ TCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTGTACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCACCAACTACTCGTGATATTAATGAAAATCCATGGCCTGAATGGCCTCGCATATGGAGAGTAGATTATGGGCACTCAGAGGTTGCTGTTCGTATAAATGGAGACCCAAGACAATTTAATACA ]
[-] EMBL BG932812 [ TCAACTTCAAGGTATTCATTTTGCTATGAGTTTCCTTGAA CGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATCTTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTGTAGTTATACTTGGTGG GGGTGACACAGGTGTT GATT GTATTGCTACATC TGTACGCCATGG AGCCGAAAATATTCGTGTGTTTGAGA TTCTCCCACCGCCACCAACTACTCGTGATATTAATGAAAATCCATGGCCTGAATGGCCTCGCATATGGAGAGTAGATTATGGGCACTCAGAGGTTGCTGTTCGTATAAATGGAGACCCAAGACAATTTAATACA ]
consensusID : consensus_11041#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 631 fasta sequence
[ATCTATCAATCATTTTGTACTTGTATTTCCACGAGATTATAGGAATGCATTGGCCAAACTTAAAGCTTCCACAACTGCTACTGGTCCCAAGGTACAAAAAACTAGTCCTATTGTTGGAAGTAATAAAGTCAATGCTCATGGAACACAAACTACAGATATTGAAGATGTAATTAATGATGAGCCAACAGAGAAACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATCCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATGAGAATCGTATACCA]
[-] EMBL CD132311 [ATCTATCAATCATTTTGTACTTGTATTTCCACGAGATTATAGGAATGCATTGGCCAAACTTAAAGCTTCCACAACTGCTACTGGTCCCAAGGTACAAAAAACTAGTCCTATTGTTGGAAGTAATAAAGTCAATGCTCATGGAACACAAACTACAGATATTGAAGATGTAATTAATGATGAGCCAACAGAGAAACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGT ]
[-] EMBL CD090083 [ TACTGATCCCAAGGTACAAAAAACTAGTCCTATTGTTGAAAGTAATAAAGTCAATGCTCATGGAACACAAACTACAGATATTGAAGATGTAATTAATGATGAGCCAACAGAGAAACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATCCAAGGGTGATTGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCCTGATGAGAATCGTATACCA]
consensusID : consensus_11041#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence
[CTCAGTTTATAATCGATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATGGCGTTAAGTTTGAGCTAAATACACGCGTCGGTAATGATGGCCAACCTTCAGAACCCAGAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTCTATGTAT]
[+] EMBL CD150588 [CTCAGTTTATAATCGATACCAACTGGTAAACGTATTGCAATTGTTGGTAGCGGTCCGTCCGGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACGATGTAATAGTAATCGAACGAAGAAACTTACCTGGTGGTTTACTACGATATGGAATTCCAACTATGAAACTTTCTCGTGAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATGGCGTTAAGTTTGAGCTAAATACACGCGTCGGTAATGATGGCCAACCTTCAGAACCCAGAGATTTAAATTCTGTTTGTCGCGATCCAGCAGATAAAGAAAACATTTGGTCAGCTAGAAAACTACTGGATGAATTTGATGCAATAGTTCTATGTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11041#0 TTCACAGGTCGGGATAAATATTTTGGCAGACTGGAATAAATCTATCAATCATTTTGTACT 60
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 TGTATTTCCACGAGATTATAGGAATGCATTGGCCAAACTTAAAGCTTCCACAACTGCTAC 120
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 TGATCCCAAGACACAAACTACAGATATTGAAGATGTAATTAATGATGAGCCAACAGAGAA 180
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 ACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGTCCAGT 240
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 TGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAAGGTTT 300
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 GGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATACGTTGG 360
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 GTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATTCAAGGGTGATTGGCA 420
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 CGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGTGTATG 480
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 CCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACTATAAA 540
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------ATCTATCAATCA 12
consensus_11041#0 GCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCTATTCC 600
consensus_11041#2 ---------------------------------------------------------CTC 3
consensus_11041#1 TTTTGTACTTGTATTTCCACGAGATTATAGGAATGCATTGGCCAAACTTAAAGCTTCCAC 72
*
consensus_11041#0 TGATGAGAATCGTATACCAACTGGTAAACG--TATTGCAATTGTTGGTAGCGGTCCGTCC 658
consensus_11041#2 AGTTTATAATCG-ATACCAACTGGTAAACG--TATTGCAATTGTTGGTAGCGGTCCGTCC 60
consensus_11041#1 AACTGCTACTGG--TCCCAAGGTACAAAAAACTAGTCCTATTGTTGGAAGTAATAAAGTC 130
* * * * * **** *** ** * * ******** ** * *
consensus_11041#0 GGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACG-ATGTAATAGTAATCGAACG 717
consensus_11041#2 GGTTTAGCTTGTGCAGATCAACTAAATAAGGTTGGACACG-ATGTAATAGTAATCGAACG 119
consensus_11041#1 AAT---GCTCATGGAACACAAACTACAGATATTGAAGATGTAATTAATGATGAGCCAACA 187
* *** ** * *** * * *** * * * * **** * * * ***
consensus_11041#0 AAGAAACTT-ACCTGGTGGTTTACTACGATATGGAATTCCAACTATGA-AACTTTCTCGT 775
consensus_11041#2 AAGAAACTT-ACCTGGTGGTTTACTACGATATGGAATTCCAACTATGA-AACTTTCTCGT 177
consensus_11041#1 GAGAAACTGGACAAAGTGCGCGGCTTCGTCAAGTATGCCAGACAGAAACAAAATTATCGT 247
******* ** *** ** ** * * * * ** * ** ** ****
consensus_11041#0 GAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATG-------------GCGTTAA 822
consensus_11041#2 GAAGTTCTAGATCGCCGATTAAATCTAATGAAAGCTAATG-------------GCGTTAA 224
consensus_11041#1 CCAGTTGAAGAACGTGTGAAAGACTGGGAAGAGGTTTACGCTCTAAAACAAATACGCCAA 307
**** *** ** * * * * * * * ** **
consensus_11041#0 GTTTGAGCTAAATACAC--------GCGTCGGTAATGATGGCCAACCTTCAGAACCCAGA 874
consensus_11041#2 GTTTGAGCTAAATACAC--------GCGTCGGTAATGATGGCCAACCTTCAGAACCCAGA 276
consensus_11041#1 GGTTTGGTCAAACAAGCTGCTCGCTGTATGGATTGCGGTGTGCCATTTTGTCAATCATAC 367
* ** * *** * * * * * * * ** * * ** ** *
consensus_11041#0 GATTTAAATTCTGTTTG---TCGCGATCCAGCAGATAAAGAA--AACATTT--GGTCAGC 927
consensus_11041#2 GATTTAAATTCTGTTTG---TCGCGATCCAGCAGATAAAGAA--AACATTT--GGTCAGC 329
consensus_11041#1 GTTGGGTGCCCTCTTGGGAATCTTATTCCAAACTGGAATGATTTGGTATCCAAGGGTGAT 427
* * ** ** * ** **** ** ** ** **
consensus_11041#0 TAGAAAACTACTGG-ATGAATTTGATGCAAT------AGTTTTATGTTTGGGTGCTACTT 980
consensus_11041#2 TAGAAAACTACTGG-ATGAATTTGATGCAAT------AGTTCTATGTAT----------- 371
consensus_11041#1 TGGCACGCTGCTCATATTGCTTTGGCACAAACCAATAATTTCCCTGAGTTCACAGGTCGT 487
* * * ** ** ** **** *** * ** ** *
consensus_11041#0 GGCCTCGCGATTTGAATATTCCAGGTCGTCAACTTCAAGGTATTCATTTTGCTATGAGTT 1040
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 GTATGCCCAGCACCTTGTGAAGGTGCTTGTGTACTTGGTATAAACTCTGATCCAGTGACT 547
consensus_11041#0 TCCTTGAACGCTGGCAACGTTATCAACACAAGAATAGGATTAAGCACACATATTTTGATC 1100
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ATAAAGCATATTGAAGGTACCATCGCAGACAAAGCCTGGGAAAATGGCTGGTTACATCCT 607
consensus_11041#0 TTCAAAACGATAATAATTTTGATTCTGATTCTGTGGCTACATTAGCCAAAGGTAAACGTG 1160
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ATTCCTGATGAGAATCGTATACCA------------------------------------ 631
consensus_11041#0 TAGTTATACTTGGTGGGGGTGACACAGGTGTTGATTGTATTGCTACATCTGTACGCCATG 1220
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 GAGCCGAAAATATTCGTGTGTTTGAGATTCTCCCACCGCCACCAACTACTCGTGATATTA 1280
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 ATGAAAATCCATGGCCTGAATGGCCTCGCATATGGAGAGTAGATTATGGGCACTCAGAGG 1340
consensus_11041#2 ------------------------------------------------------------
consensus_11041#1 ------------------------------------------------------------
consensus_11041#0 TTGCTGTTCGTATAAATGGAGACCCAAGACAATTTAATACAATAACTAAAGAATT 1395
consensus_11041#2 -------------------------------------------------------
consensus_11041#1 -------------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||