These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11043#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 962 fasta sequence [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT-A-GTATCAATCG-GAATGG-GAGGTCT-GAAAGTTTTCCAAG-TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA-C-GCCCCC-CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT-ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCACAACCGATTACCTCACACCTGGATCATAGTTTGCACAATGCACATCATCAGAACAGGGCTTCACCATCACTATCACCCAGTCCTGGAAACAATATTTATCAAAATCGCCGTTCACAACTGGCTCCCCCTTCAACTCATCCGAACAAAAGACTCTATTCCTTA] [+] EMBL CD202296 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTACCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGT ] [+] EMBL CD153037 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCGCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGTCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCGACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGT ] [+] EMBL CD153411 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCGCCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGC ] [+] EMBL CD153142 [TGGGGGAGTTTTGCTCTAGACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGC ] [+] EMBL CD202277 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGC ] [-] EMBL CD202255 [ GGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATGTAAGTCAGTCACAACTCAACGCTCTGGCAGCT ] [-] EMBL CD095362 [ aagtactcGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATACTTCAACAGCAACAGCTGGCTTTCTACCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAA ] [-] EMBL CD095308 [ aagtactcGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATACTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAA ] [+] EMBL CD070902 [ GGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACCGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCC ] [-] EMBL CD199464 [ GGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACGAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCA ] [-] EMBL CD199546 [ GGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCT ] [+] EMBL CD184661 [ TTATGCCAGTAA GTATCAATCG GAATGGCGAGGTCTAGAAAGTTTTCCAAGTTGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCT ] [+] EMBL CD131135 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGT ] [+] EMBL CD185019 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTGGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATT ] [+] EMBL CD185002 [ GCCAGT A GTATCAAACG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGAT ] [+] EMBL CD185012 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCccgg ] [+] EMBL CD185026 [ GCCAGT A GTATCAATCG GAATGG GAGGTGT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACTTTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCANACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGT ] [+] EMBL CD184848 [ GCCAAT ATATATCAATCGCGAATGG GAGGTCT GAAAGTTTTCCAAG TGGATGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTAGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTATATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTAC ] [+] EMBL CD131097 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCT ] [-] EMBL CD184809 [ CCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACGACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAA ] [-] EMBL CD185009 [ CCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACGACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTAACATCTGTATCGAAGTCATCATCTCCAACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATGAAGGGAACCAAAAAGCAGCCCCCACTA ] [-] EMBL CD184996 [ GCAGGGTTGTGAACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAG ] [-] EMBL CD184844 [ GGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGAGGTCAGTCCCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCTCA ] [-] EMBL CD184834 [ CAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCACA ] [-] EMBL CD070896 [ TTGGCCCAACTGCTTCAGGAACTTCAACTCTNGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACCCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCTCACCCCCACGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCG ] [-] EMBL CD070731 [ CAGGANCTTCAACTCTTGGTCACGTACCAGAAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCG ] [-] EMBL CD061951 [ CC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCACAACCGATTACCTCACACCTGGATCATAGTTTGCACAATGCACATCATCAGAACAGGGCTTCACCATCACTATCACCCAGTCCTGGAAACAATATTTATCAAAATCGCCGTTCACAACTGGCTCCCCCTTCAACTCATCCGAACAAAAGACTCTATTCCTTA] [+] EMBL CD164205 [ CACAATGCACATCATCAGACAAGGGCTTCACCATCACTATCACACAGTCCTGGAAACAATATTTATCAAAATCGCCGTTCACAACTGGCTCCC ] consensusID : consensus_11043#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 613 fasta sequence [GCCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCATCCGAACAAAAGACCTCGTATTTCCTTAGGATCCCAATTACCACACTCCATTTCGTCCTTACCTTCTGCTCATGTAACAAATACAATTGCTCCAGCTGAGATGGAAGCTTTGCTGGGGAGTGTTGTTGCTAGTAAGGCGATGGCAAGTATTGCAGCTGGTCCTAACTTTCTTAATCCAAACGCCTATTCTGCAGCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCACACCTTTTTATACATCAATTAACAATAGCAGCTTATCGAACCCATCATCGGTCGCCACTCCAAATCAAACTGCTTATCAACCGCACATTCAACATCACGGTTCAGTCGGTAGTAATTCAACTTCTGGCACTCATTTATTCAATCAACAACATGTTTTACCATCTTCCAGTTCAGCGTATCCAGGTTCTCTGATGGGTACCTTACCTGGTTCGCTTCTAACCTCGTACAATAACAG] [+] EMBL CD184788 [GCCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCATCCGAACAAAAGACCTCGTATTTCCTTAGGATCCCAATTACCACACTCCATTTCGTCCTTACCTTCTGCTCATGTAACAAATACAATTGCTCCAGCTGAGATGGAAGCTTTGCTGGGGAGTGTTGTTGCTAGTAAGGCGATGGCAAGTATTGCAGCTGGTCCTAACTTTCTTAATCCAAACGCCTATTCTGCAGCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCA ] [-] EMBL CD200228 [ GCTGGGGAGTGTTGTTGCTAGTAAGGCGATGGCAAGTATTGCAGCTGGTCCTAACTTTCTTAATCCANACGCCTATTCTGCAGCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCACACCTTTTTATACATCAATTAACAATAGCAGCTTATCGAACCCATCATCGGTCGCCACTCCAAATCAAACTGCTTATCAACCGCACATTCAACATCACGGTTCAGTCGGTAGTAATTCAACTTCTGGCACTCATTTATTCAATCAACAACATGTTTTACCATCTTCCAGTTCAGCGTATCCAGGTTCTCTGATGGGTACCTTACCTGGTTCGCTTCTAACCTCGTACAATAACAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11043#0 TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTC 60 consensus_11043#1 ------------------------------------------------------------ consensus_11043#0 CTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAA 120 consensus_11043#1 ------------------------------------------------------------ consensus_11043#0 CAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATT 180 consensus_11043#1 ------------------------------------------------------------ consensus_11043#0 TACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATG 240 consensus_11043#1 -----------------------------------------------------------G 1 * consensus_11043#0 CCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCA 300 consensus_11043#1 CCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCA 61 ************************************************************ consensus_11043#0 CAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTT 360 consensus_11043#1 CAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTT 121 ************************************************************ consensus_11043#0 GTAGCCATCTAAGTCAGTCACAACTCAAC-GCTCTGGCAGCTGCTTACCATCAACAGCAG 419 consensus_11043#1 GTAGCCATCTAAGTCAGTCACAACTCATCCGAACAAAAGACCTCGTATT-TCCTTAGGAT 180 *************************** * * * * * ** ** ** * consensus_11043#0 CAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTA 479 consensus_11043#1 CC-CAATTACCACACTCCATT-------TCGT--------CCTTACCTTCTGCTCATGTA 224 * *** * * ** ** ** * * * * ** ** *** *** consensus_11043#0 CCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCT 539 consensus_11043#1 ACAAA---TACAATTGCTCCAGCT----GAGATGGAAGCTTTGCTGGGGAGT-GTTGTTG 276 ** **** **** * *** ** * * * ** * *** * * consensus_11043#0 CCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCA 599 consensus_11043#1 CTAGTAA--------GGCGATGGCAAGTATTG-----CAGCTGG--TCCTAACTTTCTTA 321 * ** ** * * ** * * ** ** * * * * ** * consensus_11043#0 GTCCAAACACCTGTGCATCAAGGGAACCAAAAACGCCCCCCTAGTGGT--CAGTCTCAGT 657 consensus_11043#1 ATCCAAACGCCTATTCTGCA--GCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCAC 379 ******* *** * * ** * ** ** ** * ** * *** * consensus_11043#0 TTCACTCAGGACATCCTATTCAAATGG-GTTCAACTACACCCGGTACTCGTCCAGCTTCA 716 consensus_11043#1 ACCTTTTTATACATCAATTAACAATAGCAGCTTATCGAACCCATCATCGGTC--GCCACT 437 * * ***** * *** * * **** * *** ** * consensus_11043#0 GCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACA 776 consensus_11043#1 CCAAATCAAACTGCTTATCAACCGCACATTCAACATCACGGTTCAGTCGG---TAGTAAT 494 * *** ** *** * * * **** ***** ** * * consensus_11043#0 ATGAGTTCTCACATCAATCCATCACAACCGATTACCTCACAC-CTGGATCATAGTTTGCA 835 consensus_11043#1 TCAACTTCTGGCACTCATTTATT-CAATCAACAACATGTTTTACCATCTTCCAGTTCAGC 553 * **** ** ** ** *** * * ** * * * **** consensus_11043#0 CAATGCACATCATCAGAACAGGGCTTCACCATCACTATCACCCAGTCCTGGA-AACAATA 894 consensus_11043#1 GTATCCAGGTTCTCTGATGGGTACCTTACC-TGGTTCGCTTCTAACCTCGTACAATAACA 612 ** ** * ** ** * * * *** * * * * * * * * ** ** * consensus_11043#0 TTTATCAAAATCGCCGTTCACAACTGGCTCCCCCTTCAACTCATCCGAACAAAAGACTCT 954 consensus_11043#1 G----------------------------------------------------------- 613 consensus_11043#0 ATTCCTTA 962 consensus_11043#1 -------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||