These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1128 fasta sequence [AATATTTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCG-ATGGAG-CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC-TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG-TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC-ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT-CATCAACCTCCGTCTTCAGTAGC-TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC-GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT-GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA-GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCA] [-] EMBL CD113449 [AATATTTTCGTTGGAAAGCAAAGGGTCGCGAGTTTTGCGAATGAAGCCAACCCTGTTATTATAAAATTTAAGGTATTGAG AAACTGCTTTCAGCCGATAAAATAAAAAAAGCCTATCGCGAACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGAAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTCTCACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGG ] [-] EMBL CD180812 [ gaATTTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAG ] [+] EMBL CD113285 [ TTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCTCAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTCTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTNCGTCTTCAGTAGC TTTG ] [+] EMBL CD140912 [ TCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGA ] [+] EMBL CD140814 [ TCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTGTAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGACCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTC ] [+] EMBL CD155353 [ AGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATGNTTTACngcngaa ] [+] EMBL AW017055 [ GAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCT ] [-] EMBL CD140924 [ ACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGCCAAG ] [-] EMBL CD147718 [ ATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTT ] [+] EMBL CD063640 [ AGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTA ] [-] EMBL BG931413 [ TCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCGAC ] [+] EMBL CD144244 [ ATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACA ] [+] EMBL AI740275 [ TCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGCTTTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACCGGGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCAAATTTATTGTTGCGCCAATag ] [+] EMBL AI882641 [ ATGGGTNGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTCGACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATTGGATTTTGTATAATCAGTTTCACAGTTATTTGTTGAGGGTCGTTAAAGTAATATTTATG ] [+] EMBL BG931126 [ tgcGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAATCTCCTTCTTCTATAGC TCAGGTGGATCTTCCTGTGCAAGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAG ] [+] EMBL BG930577 [ GTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGA ] [+] EMBL BG931363 [ GTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAAC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGAAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGA ] [-] EMBL BG931358 [ TCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAc ] [-] EMBL AI395827 [ CTGTTTAAT CTTTGATGGCTATC ACCAATTCTGGGTTCGGAAATCTCCA GGTTCTTCCATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGCTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAA ] [-] EMBL AI395162 [ TCTCCAGGGTTCTT CATCCACCTCCGTCTTCAGTAGC TTTGGTGAATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAA ] [+] EMBL CD065495 [ GGATCTTCC GTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTACATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTAT ] [+] EMBL CD065588 [ TCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACAT CTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTAT ] [-] EMBL AI067854 [ TCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATACATATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTATAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGC ] [-] EMBL AI067797 [ TCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCA] [-] EMBL AI067825 [ TCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGATGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATCTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTG AAAAAAAAAAAAAAAAAAAAAAAACATGC ] [-] EMBL AI067116 [ GAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTATAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCT ] [-] EMBL AA999461 [ GAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGTAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATAAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTATTAAATCCTCTTATAATACTTCTATAAAATAAATat ] [-] EMBL AI395194 [ AGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAG CCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAA ] consensusID : consensus_11051#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 331 fasta sequence [TTACCGAGGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATTGATTGTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAANNNNNAAAAA] [-] EMBL AI395603 [TTACCGAGGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATTGATTGTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAANNNNNAAAAA] consensusID : consensus_11051#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 200 fasta sequence [TCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTTCCGTCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATGTTTACGCGATTCCACTTCCGAGATCCTATGGATATATACCGA] [+] EMBL CD065552 [TCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTTCCGTCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATGTTTACGCGATTCCACTTCCGAGATCCTATGGATATATACCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11051#0 AATATTTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCGATGGAGCAAACCTGTTATTAT 60 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 AAAATTTTAGGTATTGAGAAAACTGCTTCAGGCGATGAAATAAAAAAAGCCTATCGCCGA 120 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 CTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGC 180 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 TTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATAT 240 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 GACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCT 300 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 TTCTCAATGTTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTT 360 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 GCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCT 420 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 CAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCT 480 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 CCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAAC 540 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 CCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATG 600 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 GCTTTCACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTTCATCAACCTCCGTCTTCAGT 660 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 AGCTTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTAC 720 consensus_11051#1 ------------------------------------------------------------ consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 GTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACC 780 consensus_11051#1 -------------------------------------------------------TTACC 5 consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 GAAGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTG 840 consensus_11051#1 GAGGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTG 65 consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 CAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT 900 consensus_11051#1 CAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT 125 consensus_11051#2 ------------------------------------------------------------ consensus_11051#0 GATTTTGTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTG 960 consensus_11051#1 GATT--GTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTG 183 consensus_11051#2 --TCCTGTGCAGGTGGTTTCA-GGTCAGTT-TCAACATCCTCCAAGTTCCGTC-ATATGA 55 * ** * ****** ** * ** * * ** * **** * ** * consensus_11051#0 TCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTT 1020 consensus_11051#1 TCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTT 243 consensus_11051#2 AGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGC 115 * ** ** * ** **** ** *** * * * * * consensus_11051#0 TGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAA 1080 consensus_11051#1 TGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAA 303 consensus_11051#2 TGGTGAGGCATTCGTATTTGAGGATTCT--GATCCTTTCTCAATGTTTACGCGAT-TCCA 172 *** *** * * * * * ***** * *** ** * * * consensus_11051#0 TCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCA 1128 consensus_11051#1 TCTTTCCCACTGAAAAAANNNNNAAAAA-------------------- 331 consensus_11051#2 CTTCCGAGATCCTATGGATATATACCGA-------------------- 200 * * * * * * |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||