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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11083#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1684 fasta sequence
[CAGACTCATACAATATCAGTCCAAGCAAAGATTGCCATCCTACAACAAATAACACTGGATCACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATACTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTACAAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGGCAGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC-AAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA-TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC-AGGAAAATA-CTCCCGTGAATATTTTGATAAACG-AGCTTGTTTACGTCATATACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC-AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA-GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTACCAGATCTCAGTCC]
[+] EMBL CD192244 [CAGACTCATACAATATCAGTCCAAGCAAAGATTGCCATCCTACAACAAATAACACTGGATCACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATACTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTACAAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGGCAGCAGCTG ]
[+] EMBL CD120631 [ ATTGCCATCCTACAACAAATAACACTGGATCACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATACTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTACAAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGC ]
[+] EMBL CD195766 [ CAGAAGAAAGTGATCAATTTGTACAAAAGGACAGTGAAAGTGGCAGTGGACTGGCTGTTCGCCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAA ]
[+] EMBL CD195654 [ GCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGGCGGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTn ]
[+] EMBL CD197443 [ ATCATTCAACCAGATGGGCTTTTGGCAGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGACTAAATCAACTCTGACAGCAAAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTG ]
[+] EMBL CD192858 [ CAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC AAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGG ]
[+] EMBL CD194235 [ GAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC AAACAGTACCGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCA ]
[-] EMBL CD171089 [ GTCAAAGGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC AAACAGTACTGGTGAAGGTAGCTCCAAACGGTCGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCAC ]
[-] EMBL CD155042 [ GACAGC AAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATC ]
[+] EMBL CD128115 [ AATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACA ]
[-] EMBL CD195985 [ ACTGTGATACATGANCCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATCTTGATAAACG AGCTTGTTTACGTCATATACATCG ]
[-] EMBL CD063471 [ GTGATACATGAACCTGATGCTAGTAAAGAGCCATGTAATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTATTCTTTTCGAAC ]
[-] EMBL CD195649 [ TTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATCG ]
[-] EMBL CD137462 [ ATA TGCTCCTTCAAGGAAAATACCTCCCGTGAATATTTTGAT TACGAAGCTTGTNTACGTCATATACATCGCTTGAAACC TGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGga ]
[+] EMBL CD137488 [ TTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC AATGCTCGCCTATGATCCTGATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATA ]
[+] EMBL CD115310 [ ACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTTCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATAT ]
[+] EMBL CD068164 [ gaTGGCCACCAAG GAAGCGGCTCTTTTCACCAG TTTTTGGAACC AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATT ]
[-] EMBL CD182463 [ ACCAAATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTC ]
[-] EMBL CD120178 [ gTGANGGAAGGCCTACCAAATCATATCCCATTNGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATAT ]
[+] EMBL CD192206 [ GTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTACCAGATCTCAGTCC]
[+] EMBL CD192264 [ GTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTACCAGATCTCAGTCC]
[+] EMBL CD166488 [ acACAATAT CGACAG TCA TGCGTTGCTCCACAATCCAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTCTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTG ]
[-] EMBL CD181935 [ CCGACAGTTCANTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAA ]
consensusID : consensus_11083#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 999 fasta sequence
[GCCTAACCATGTAGGATTTCGCTCGTCGTTTTGAATGGACGACATCTTAGTAGGGTTATTAATGGGAGCTGTTTTGTCCTCCAAAATACTGCTGCAAGCCTTGAATGGAATGGAGATTGCGTAGCCTAACACCGAGACAACAGCACGCGCAGTATCCATAAACACTGAACCAACAGTGTTATTTGTTGTAGGATGGCAATCTTTGCTTGGACTGATATTGTATGAGTCTGTTGTTGGGGGAGTAGTATTAACCTCATTCGAGTATGACTGTTCTGGGGATATTTCTGAATCCCTTTTAGGTTTTTCATCCACTTGTTCTGGCTCTTCATGGTTTTGTTCACTGTCAGCAGGAATCAGTCCCATATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTGTTCTAAAAGTGCTTGTTGTTTTCTTTGTTGCTTTTTTAGACGGCGCTTGCGACTTTTTGTCATCTTCGTGTTATCTTGTTTTTCTTTGGGTGCAGTGCTCACTGCAGAACCTGACAGCTGTACACCTCGCCTTTGAGCATCGAGGGCCTCCGCTGCCATCCTACGAATTTGAGAATCAGAAATACAAACCAAAATGTTTTCCGGTTTGATATCTGTATGAATAATGTGACACTTTGTGTGCAAGTAGTGAAGTCCTTGAAGGGTTTGTTTAATAATAGAACGAACATTTTCGAGCGGAATGCCTCGGTACTGAGACCTGATTATAAGCTTTAATAAATTATGGCCAAGAACCTCAAATATCATACAGACATGGTTCCCATTTACACCAGACACTCTGAAATCATCTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCACGGACGCATGACAGCAGCTTGATTTCATCAAGAGCTGTTTCTGTGTAGTGCGGAGCACTCTTGACTACTTTCATTGCAACGAAACGTTTTGAACATAAATCCCAGCATAACCACACAGTGGA]
[+] EMBL CD119168 [GCCTAACCATGTAGGATTTCGCTCGTCGTTTTGAATGGACGACATCTTAGTAGGGTTATTAATGGGAGCTGTTTTGTCCTCCAAAATACTGCTGCAAGCCTTGAATGGAATGGAGATTGCGTAGCCTAACACCGAGACAACAGCACGCGCAGTATCCATAAACACTGAACCAACAGTGTTATTTGTTGTAGGATGGCAATCTTTGCTTGGACTGATATTGTATGAGTCTGTTGTTGGGGGAGTAGTATTAACCTCATTCGAGTATGACTGTTCTGGGGATATTTCTGAATCCCTTTTAGGTTTTTCATCCACTTGTTCTGGCTCTTCATGGTTTTGTTCACTGTCAGCAGGAATCAGTCCCATATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTGTTCTAAAAGTGCTTGTTGTTTTCTTTGTTGCTTTTTTA ]
[-] EMBL CD192043 [ TATTAATGGGAGCTGTTTTGTCCTCCAAAATACTGCTGCAAGCCTTGAATGGAATGGAGGTTGCGTAGCCTAACACCGAGACAACAGCACGCGCAGTATCCATAAACACTGAACTAACAGTGTTATTTGTTGTAGGATGGCAATCTTTGCTTGGACTGATATTGTATGAGTCTG ]
[-] EMBL CD188488 [ agCCACTTGGTAGGGTTTGTCATGGTTTTGTTCACTGTCAGCAGGAATCAGTCCCATATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTGTTCTAAAAGTGCTTGTTGTTTTCTTTGTTGCTTTTTTAGACGGCGCTTGCGACTTTTTGTCATCTTCGTGTTATCTTGTTTTTCTTTGGGTGCAGTGCTCACTGCAGAACCTGACAGCTGTACACCTCGCCTTTGAGCATCGAGGGCCTCCGCTGCCATCCTACGAATTTGAGAATCAGAAATACAAACCAAAATGTTTTCCGGTTTGATATCTGTATGAATAATGTGA ]
[-] EMBL CD186648 [ AATCAGAAATACAAACCAAAATGTTTTCCGGTTTGAAATCTGTATGAATAATGTGACACTTTGTGTGCAAGTAGTGAAGTCCTTGAAGGGTTTGTTTAATAATAGAACGAACATTTTCGAGCGGAATGCCTCGGTACTGAGACCTGATTATAAGCTTTAATAAATTATGGCCAAGAACCTCAAATATCATACAGACATGGTTCCCATTTACACCAGACACTCTGAAATCATCTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCACGGACGCATGACAGCAGCTTGATTTCATCAAGAGCTGTTTCTGTGTAGTGCGGAGCACTCTTGACTACTTTCATTGCAACGAAACGTTTTGAACATAAATCCCAGCATAACCACACAGTGGA]
[-] EMBL CD166436 [ CCTTGAAGGGTTTGTTTAATAATAGAACGAACATTTTCGAGCGGAATGCCTCGGTACTGAGACCTGATTATAAGCTTTAATAAATTATGGCCAAGAACCTCAAATATCATACAGACATGGTTCCCATTTACACCAGACACTCTGAAATCATCTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCGCGGACGCATGACAGCAGCTTGATTTCATCAAGAGCTGTTTCTGTGTAGTTCGGAGCACTCTTGA ]
consensusID : consensus_11083#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 678 fasta sequence
[CGATGAGCAAGAAGACCCTCGGGACTACTGTATAGGTGGATACCATCCTGTTAAGATCGGGCAGGTATATAATTCGCGTTACCACGTCGTCCGTAAACTTGGTTGGGGGCACTTTTCCACTGTGTGGTTATGCTGGGATTTATGTTCAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATTGCTAAGATGATTTCAGAGTGTCTGGTGTAAATGGGAACCGTATCCTTTTATCCTATTGTTCATTTACTCGTACCCATCGAGTTTTCTAATTACGTCATTCTGGTATGTATTTTCACCATCTTTATCATCGTAGTGAGATTCCCTGGCCATGCACAGTCATACCCTTAGACGTCGAAACTGGGTCCACCCAGTAATTTTCGCTACAATCTGCCGGTGTATGGGATTCTATGCGTAAAATCACCATGGTACCAAACAGCAGGAATATCTTGGCAGCTCTTGAGAATATCTGGCTTGTTGCGTACTTTCTGCGACGTATATCTCTAATTTGCTTTGGCAAACTACTTGCCATTAAAATCTCCATAATTCATTTCGCCGGTTACATATACCTTACGCGCA]
[+] EMBL CD186003 [CGATGAGCAAGAAGACCCTCGGGACTACTGTATAGGTGGATACCATCCTGTTAAGATCGGGCAGGTATATAATTCGCGTTACCACGTCGTCCGTAAACTTGGTTGGGGGCACTTTTCCACTGTGTGGTTATGCTGGGATTTATGTTCAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATT ]
[+] EMBL CD069416 [ GATTTATGTTCAAAACGTATCGTTGCAATGAAAGTAGTCCAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATTGCTAAGATGATTTCAGAGTGTCTGGTGTAAATGGGAAC ]
[+] EMBL CD071689 [ CAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCG ]
[+] EMBL CD123336 [ CTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATTGCT AGATGATTTCAGAGTGTCTGGTGTAAATGGGAACCGTATCCTTTTATCCTATTGTTCATTTACTCGTACCCATCGAGTTTTCTAATTACGTCATTCTGGTATGTATTTTCACCATCTTTATCATCGTAGTGAGATTCCCTGGCCATGCACAGTCATACCCTTAGACGTCGAAACTGGGTCCACCCAGTAATTTTCGCTACAATCTGCCGGTGTATGGGATTCTATGCGTAAAATCACCATGGTACCAAACAGCAGGAATATCTTGGCAGCTCTTGAGAATATCTGGCTTGTTGCGTACTTTCTGCGACGTATATCTCTAATTTGCTTTGGCAAACTACTTGCCATTAAAATCTCCATAATTCATTTCGCCGGTTACATATACCTTACGCGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11083#0 CAGACTCATACAATATCAGTCCAAGCAAAGATTGCCATCCTACAACAAATAACACTGGAT 60
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 CACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATA 120
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 CTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTAC 180
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 AAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAG 240
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 ATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCAC 300
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 AGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGG 360
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 CAGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAA 420
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 ACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAG 480
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 GAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGCAAACAGTACTGGTG 540
consensus_11083#1 ------------------------------------GCCTAACCATGTAGGATTTCGCTC 24
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 AAGGTAGCTCCAAACGGTTGAG--TTTGGTTGCACCATCTAATAACAATTCAGCTTCTGG 598
consensus_11083#1 ---GTCGTTTTGAATGGACGACATCTTAGTAGGGTTAT-TAATGGGAGCTGTTTTGTCCT 80
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 TCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGA 658
consensus_11083#1 CCAAAATACTGCTG-CAAGCCTTGAATGGAA----TGGAGATTGCGTAGCCTAACACCGA 135
consensus_11083#2 --------------------------------------CGATGAGCAAGAAGACCCTCGG 22
** *
consensus_11083#0 TGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGAT-TTGGGTAATGCATGCT 717
consensus_11083#1 GAC-AACAGCACGCGCAGTATCCATAAACACTGAACCAACAGTGTTATTTGTTGTAGGAT 194
consensus_11083#2 GACTACTGTATAGGTGGATACCATCCTGTTAAGATCGGGCAGG--TATATAATTCGCGTT 80
* * * * * * * * * * *
consensus_11083#0 GGACTTATCGTCATTTT-ACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTT 776
consensus_11083#1 GG--CAATCTTTGCTTGGACTGATATTGTATGAGTCTGTTGTTGGGGG-----AGTAGTA 247
consensus_11083#2 AC-CACGTCGTC-CGTAAACTTGGTTGGGGGCACTTTTCCACTGTGTGGTTATGCTGGGA 138
** * * *** * *
consensus_11083#0 CTCATTGGCTCCGAATATGGACCACCCGCAGATATTTG-GAGTACGGCTTGTATGGCTTT 835
consensus_11083#1 TTAACCTCATTCGAGTATGACTGTTCTGGGGATATTTCTGAATCCCTTTTAGGTTTTTCA 307
consensus_11083#2 TTTATGTTCAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGC--TCCGCACTACACA 196
* * * * * ** * ** * *
consensus_11083#0 TGAATTGGCTACGG-GTGATTATCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAG 894
consensus_11083#1 TCCACTTGTTCTGG-CTCTTCATGGTTTTG---TTCACTGTCAGCAGGAATCAGTCCCAT 363
consensus_11083#2 GAAACAGCTCTTGATGAAATCAAGCTGCTG----TCA-TGCGTCCGCGAATCTGCCCCAG 251
* * * * * * *** * ** * * *
consensus_11083#0 ATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTC 954
consensus_11083#1 ATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTG 423
consensus_11083#2 ATGATCCATTCCGGAAGAAAACAGTTCAATTGCTAAG----ATGATTT-CAGAGTGTCTG 306
** * * * * * * * * **
consensus_11083#0 TTTCAGGAAAATACTCCCGTGAATATTTTGATAAACGAGCTTGTTTACGTCATATACATC 1014
consensus_11083#1 TTCTA--AAAGTGCTTGT-----TGTTTTC---------TTTGTTGCTTTTTTAGACGGC 467
consensus_11083#2 GTGTAA-ATGGGAACCGT----ATCCTTTTAT-------CCTATTGTTCATTTACTCGTA 354
* * * * *** * ** ** *
consensus_11083#0 GCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTG 1074
consensus_11083#1 GCTTGCGACTTT------------TTGTCATCTTCGTGTTATCTTGTTTTTCTTTGGGTG 515
consensus_11083#2 CCCATCGAGTTT--------TCTAATTACGTCATTCTGGTATGTA--TTTTCACCATCTT 404
* * ** * * ** * ** * * * *
consensus_11083#0 AAGCGGCTCTTTTCACCAGTTTTTTGGAACCAATGCTCGCTTATGATCCTAATAAAAGAG 1134
consensus_11083#1 CAGTG-CTCACTGCAG-AACCTGACAGCTGTACACCTCGCCTTTGAGCATCG----AGGG 569
consensus_11083#2 TATCATCGTAGTGAGATTCCCTGGCCATGCACAGTCATACCCTTAGACGTCGAAACTGGG 464
* * * * * * * * * * *
consensus_11083#0 CTTCCGCG-TGGGATTGTTTACAACATTCCTGGATAACTGGTC--AACCGTATTCCCCAT 1191
consensus_11083#1 CCTCCGC--TGCCAT--CCTACGA-ATTTGAGAATCAGAAATACAAACCAAAATGTTTTC 624
consensus_11083#2 TCCACCCAGTAATTTTCGCTACAATCTGCCGGTGTATGGGATTCTATGCGTAAAATCACC 524
* * * * *** * * * * * * * *
consensus_11083#0 CAGTTGAGGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGA 1251
consensus_11083#1 CGGTTT--GATATCTGTATGAATAATGTGACACTTTGTGTGCAAGTAGTGAAGTCCTTGA 682
consensus_11083#2 ATGGTA--CCAAACAGCAGGAATATCTTGGCAGCTC--TTGAGAATATCTGGCTTGTTGC 580
* * * *** * ** * ** * ***
consensus_11083#0 TGGGTGACGTCTTATCTAATC-CTAGTACATATTACCATCCACATATCAATCAACCAAAT 1310
consensus_11083#1 AGGGT------TTGTTTAATA-ATAGAACGAA----CATTTTCGAGCGGAATGCCTCGGT 731
consensus_11083#2 GTACT------TTCTGCGACGTATATCTCTAAT-----TTGCTTTGGCAAACTACTTGCC 629
* ** * * ** * * * * *
consensus_11083#0 GTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAA 1370
consensus_11083#1 ACTG-AGACCTGATTATAA--GCTTTAATAAATTATGGCCAAGAACCTCA---------- 778
consensus_11083#2 ATTAAAATCTCCATAATTC---ATTTCGCCGGTTACATATACCTTACGCGCA-------- 678
* * * * * *** * * *
consensus_11083#0 CAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTAC 1430
consensus_11083#1 -AATATCATACAG------ACATGGTTCC--CATTTACAC-CAGACACTCTGA-AATCAT 827
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 ATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTAT 1490
consensus_11083#1 CTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCACGGA-CGCAT 886
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 GGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGAT 1550
consensus_11083#1 GACAGCAGCTTGATTTCA--TCAAGAGCTGTTTCTGTGTAGTGCGGAGCAC-TCTTGACT 943
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 TCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGC 1610
consensus_11083#1 ACTTTCATTGCAACGAAACGTTTTGAACATA-AATCCCAGCATAACCACACAGTGGA--- 999
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 AATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTA 1670
consensus_11083#1 ------------------------------------------------------------
consensus_11083#2 ------------------------------------------------------------
consensus_11083#0 CCAGATCTCAGTCC 1684
consensus_11083#1 --------------
consensus_11083#2 --------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||