Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 11088 cluster # 11088       Sequences # 32       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11088#0 length = 933 sequences # 19  
consensus_11088#1 length = 851 sequences # 7  
consensus_11088#2 length = 737 sequences # 2  
consensus_11088#3 length = 452 sequences # 2  
consensus_11088#4 length = 301 sequences # 1  
consensus_11088#5 length = 108 sequences # 1  

consensusID : consensus_11088#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 933
fasta sequence
                              [AGTAAGTTATCACGCGTCTGTTGAAAACATGGCTCTTGGTTGTGGGTATAAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT-GGCGTACAATT-TACA-GA-GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTG-TACACCT----TAATCAATA-TGAAGTTAGTAAACTTCTGATTGTGCTTTTAACAGGACGATTCAAT]

[+] EMBL SMAA69221            [AGTAAGTTATCACGCGTCTGTTGAAAACATGGCTCTTGGTTGTGGGTATAAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGNTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD083068             [               GTCTGTTGAAAACATGGCTCTTGGTTGTGGGTATAAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAANATCCACCGACATCATGTTCANAAGATGGGCGTA                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD135298             [                          ACATGGCTCTTGGTTGTGGGTATAAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD063661             [                              GGCTCTAGCGTGTGGGTATAAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AF521091             [                                   TTGGTTGTGGGTATAAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGCATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATACAATGACATTACGAAAACGCTTAGTGAAAAAATAAACCGAAAACAACCATT                                                                                                                                                                                                         ]
[+] EMBL CD082344             [                                     actngnGGGTATAAGTGTTTGCAGTGTTTGCTATTTATTTTCAACTGTGGACCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATG                                                                                                                                                                                                                                                       ]
[+] EMBL CD082013             [                                              gaggAGTGTTTGCAGTGTTTGCTAATTATTTTC ACTGTGGAGCATTC TATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAACCAG AAACAACCATT AAAAATTAAGCG AAAACCCTAA TTTTCACACTTAGCCCG AAATA TTACTCA TATTNNTA ATACAGTGGAG TTATA TATGTGAGTA  TTTCGAC TTGNGTT  ATCTC TTC ATAA                                                                          ]
[+] EMBL BF936447             [                                                           AGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCGGGGATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACA                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD075655             [                                                                                                                                                                                                                                                                                TATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATTTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTG TACACCT    TAATCAATA TGAAGTTAGTAAACTTCTGATTGTGCT                   ]
[-] EMBL CD075628             [                                                                                                                                                                                                                                                                                               GTATTCTTCTATCAATTTTAATGGTGNCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATTTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTT                                                                     ]
[-] EMBL CD073037             [                                                                                                                                                                                                                                                                                                                                            TATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATTTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTG TACACCT    TAATCAATA TGAAGTTAGTAAACTTCTGATTGTGCT                   ]
[-] EMBL CD076641             [                                                                                                                                                                                                                                                                                                                                                         AGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTCCCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATTTAAGCAAAGCGCCCCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGCCATTACGAAAACGCTTAGTGAAAAAATAAACAGAAACCACCCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTG TAC                                                                ]
[-] EMBL CD135995             [                                                                                                                                                                                                                                                                                                                                                                               CACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTAT                                                                                                                                             ]
[-] EMBL AI977281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              AACAAAAATTACATCGCTGTGGTGCTGACTCTCATAAAGATTATGGCGAAGATCCACCGACATCATGTTCAAAAGAT GGCGTACAATT TACA GA GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGATAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTT                                                                     ]
[+] EMBL CD080200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     cctcca GGCCAANAATTCGGCACGAGGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTG TACACCT    TAATCAATA TGAAGTTAG                                     ]
[-] EMBL CD177835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      tgttgcAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTCGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGGAAACGCTTAGTGAAAAAATAAACAGAAAACCACCATTTAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTGCCACACCTCCTGTGATCACTAGTGGATTTcg                                     ]
[-] EMBL CD177899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      tgttgcAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCCCCAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTGCAACAC                                                              ]
[-] EMBL SMAA43848            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTG TACACCT    TAATCAATA TGAAGTTAGTAAACTTCTGAT                         ]
[-] EMBL SMW804               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGAAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTG TACACCT    TAATCAATA TGAAGTTAGTAAACTTCTGATTGTGCTTTTAACAGGACGATTCAAT]


>consensus_11088#0 AGTAAGTTATCACGCGTCTGTTGAAAACATGGCTCTTGGTTGTGGGTATAAGTGTTTGCA GTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGT TGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACA ATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGG GATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATC AATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGT CAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACA TGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCC TAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGA GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAG CGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATT GGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAAT AAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGG AAAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTTTCGA CTTTGTGTTTCATCTCTTTCAATAAACTTTGTACACCTTAATCAATATGAAGTTAGTAAA CTTCTGATTGTGCTTTTAACAGGACGATTCAAT



consensusID : consensus_11088#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 851
fasta sequence
                              [CCCTCGNAGCCAANAATTCGGCACGAGGATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTC-AAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCTAATTNTTCACACTTAGCCGGAAATATTTACTCATTATTNTATATACAGTGGAGTTATATTATGTGAGTAATTTCGACTTTGTTTNCATCTCTTCAATAACTTGTCACTTATCATATGAAGTAGTAACTCTGATG]

[+] EMBL CD082040             [CCCTCGNAGCCAANAATTCGGCACGAGGATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTC AAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCTAATTNTTCACACTTAGCCGGAAATATTTACTCATTATTNTATATACAGTGGAGTTATATTATGTGAGTAATTTCGACTTTGTTTNCATCTCTTCAATAACTTGTCACTTATCATATGAAGTAGTAACTCTGATG]
[+] EMBL CD078570             [                                           GGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTC AAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCANAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCANATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATG                                                                                                                                                                                                                  ]
[+] EMBL CD137094             [                                                                GGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTC AAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGNTCAAATGATTTGTCTAGTATTTGCAGTATGTG                                                                                                                                                                                                                                                ]
[+] EMBL CD137719             [                                                                                                          AATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD170356             [                                                                                                          AATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGACGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTC AAAAAACACCTTACTTATGCCTTAAAAAAATTAATAAATTAGTACCGGAATGGCCAACATGGTCca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD137765             [                                                                                                          AATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAAGAATATTTGCTATAGTAGAAAAGCCCAAGGTC AAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD137730             [                                                                                                          AATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTC AAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_11088#1 CCCTCGNAGCCAANAATTCGGCACGAGGATTATTTTCAACTGTGGAGCATTCATATGTGG TCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGA AATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATT TGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGAC GTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTAT AGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAA GTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTG CTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGA TGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCT CAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATT TGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAA AACGCTTAGTGAAAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCTAAT TNTTCACACTTAGCCGGAAATATTTACTCATTATTNTATATACAGTGGAGTTATATTATG TGAGTAATTTCGACTTTGTTTNCATCTCTTCAATAACTTGTCACTTATCATATGAAGTAG TAACTCTGATG



consensusID : consensus_11088#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 737
fasta sequence
                              [CAGCCAGAATTGGCCGAGGATCCTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGA-AAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGANAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTNTCGACTTTGTGTTTCATCTCTTTCATAAACTN]

[+] EMBL CD080796             [CAGCCAGAATTGGCCGAGGATCCTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGA AAAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGANAATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTNTCGACTTTGTGTTTCATCTCTTTCATAAACTN]
[-] EMBL CD069395             [                                                                                                                                                                                                                                                                                                                                                                  ATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGACAAGGATAAACAGAga                                                                                                                                           ]


>consensus_11088#2 CAGCCAGAATTGGCCGAGGATCCTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTA TCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAG CATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGG TTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACA TCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAG TTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCCTAAAGATTATG GCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGAGGGATGTATTA AAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTAGCGTGTTTCTGT TCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATGTGTTCTATTGGCTATAAAGC GCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAAAAAATAAACAGAAAAC AACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTAGCCGGANAATATTTAC TCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAATTNTCGACTTTGTGTTTC ATCTCTTTCATAAACTN



consensusID : consensus_11088#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 452
fasta sequence
                              [CCTCGAGGCAGAATCGGCACGAGGGTTGTGGGTATAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTG]

[+] EMBL CD083984             [CCTCGAGGCAGAATCGGCACGAGGGTTGTGGGTATAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTG]
[-] EMBL CD141917             [                                       TTTGCAGTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGGGATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTT                                                                                                                                                                  ]


>consensus_11088#3 CCTCGAGGCAGAATCGGCACGAGGGTTGTGGGTATAGTGTTTGCAGTGTTTGCTAATTAT TTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCT CCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTT CATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATG CATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGC CGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCAC TAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTT TGATGAAATCCAACAAAAATTACATTGCTGTG



consensusID : consensus_11088#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 301
fasta sequence
                              [GCAAAGGGCCCCCCAAAGGTATCAAAGGTAGGGGGGTTTTGTTCGCATTGGGCCAAAAGATTTGTTTAGGATTTGCAGGATGGGTTTTATTGGGTATAAAGGGCGGGGGCGATGAATAGAATGCCCTTTCGAAAACGCTTAGTGAAAAAATAAACAGAAACCCCCCCTTAAAAAATTAAGGGAAAAACCCTAATTTTTCCCCCTTAGCCGGAAAAAATTTACCCCTTATTTTTAAAAACAGGGGGGGTTATATTATGGGGGGAATTTTCGACTTTGGGGTTCATTTCTTTCAAAAAACTTT]

[-] EMBL CD075943             [GCAAAGGGCCCCCCAAAGGTATCAAAGGTAGGGGGGTTTTGTTCGCATTGGGCCAAAAGATTTGTTTAGGATTTGCAGGATGGGTTTTATTGGGTATAAAGGGCGGGGGCGATGAATAGAATGCCCTTTCGAAAACGCTTAGTGAAAAAATAAACAGAAACCCCCCCTTAAAAAATTAAGGGAAAAACCCTAATTTTTCCCCCTTAGCCGGAAAAAATTTACCCCTTATTTTTAAAAACAGGGGGGGTTATATTATGGGGGGAATTTTCGACTTTGGGGTTCATTTCTTTCAAAAAACTTT]


>consensus_11088#4 GCAAAGGGCCCCCCAAAGGTATCAAAGGTAGGGGGGTTTTGTTCGCATTGGGCCAAAAGA TTTGTTTAGGATTTGCAGGATGGGTTTTATTGGGTATAAAGGGCGGGGGCGATGAATAGA ATGCCCTTTCGAAAACGCTTAGTGAAAAAATAAACAGAAACCCCCCCTTAAAAAATTAAG GGAAAAACCCTAATTTTTCCCCCTTAGCCGGAAAAAATTTACCCCTTATTTTTAAAAACA GGGGGGGTTATATTATGGGGGGAATTTTCGACTTTGGGGTTCATTTCTTTCAAAAAACTT T



consensusID : consensus_11088#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 108
fasta sequence
                              [CTATCATAGTTAGCGTTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATATTGTTCTATTGGCTATTAAATGTGCTCGGTGAGCTAGTTAATT]

[+] EMBL SM038                [CTATCATAGTTAGCGTTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCAGTATATTGTTCTATTGGCTATTAAATGTGCTCGGTGAGCTAGTTAATT]


>consensus_11088#5 CTATCATAGTTAGCGTTGTTTCTGTTCGCATTGGTCCAAATGATTTGTCTAGTATTTGCA GTATATTGTTCTATTGGCTATTAAATGTGCTCGGTGAGCTAGTTAATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11088#2      ------------------------------------------------------------
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      ------------------------------------------CCCTCGNAGCCAANAATT 18
consensus_11088#0      AGTAAGTTATCACGCGTCTGTTGAAAACATGGCTCTTGGTTGTGGGTATAAGTGTTTGCA 60
consensus_11088#3      ------------------------------------------------------------
                                                                                   

consensus_11088#2      ------------------------------------------------------------
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      CGGCACGAGGATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGT 78
consensus_11088#0      GTGTTTGCTAATTATTTTCAACTGTGGAGCATTCATATGTGGTCTCGGGCTGATTGTGGT 120
consensus_11088#3      ------------------------------------------------------------
                                                                                   

consensus_11088#2      -----------CAGCCAGAATTGGCCGAGGATCCTGGAGCGAAATTGAACCCCCACTACA 49
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      TGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACA 138
consensus_11088#0      TGGTGCACTTGGGCTCCATTCTGTTGTAAATCACTGGAGCGAAATTGAACCCCCACTACA 180
consensus_11088#3      ------------------------------------------------------------
                                                                                   

consensus_11088#2      ATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGG 109
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      ATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGTTTTAGG 198
consensus_11088#0      ATCTCTTATTATCTTCATTATTGCTCTCGGATGCTTCTTATTTGTTTTGGGGGCTTTAGG 240
consensus_11088#3      ------------------------------------------------------------
                                                                                   

consensus_11088#2      GATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATC 169
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      GATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATC 258
consensus_11088#0      GATGTTTGGAGCATGCATGAAGAATGTTTGTTTATTAACGACGTATTGTATTCTTCTATC 300
consensus_11088#3      ------------------------------------------------------------
                                                                                   

consensus_11088#2      AATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGT 229
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      AATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGT 318
consensus_11088#0      AATTTTAATGGTTGCCGAAATAGCAGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGT 360
consensus_11088#3      ------------------------------------------------------------
                                                                                   

consensus_11088#2      CAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACA 289
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      CAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACA 378
consensus_11088#0      CAAAAAACACATCACTAGTGCATTAAAAAAATTAGTAGATAAGTACCGTAATGACGAACA 420
consensus_11088#3      ------------------------------------------------CCTCGAGGCAGA 12
                                                                                   

consensus_11088#2      TGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCC 349
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      TGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCC 438
consensus_11088#0      TGTTCGAAAAGTTTTTGATGAAATCCAACAAAAATTACATTGCTGTGGTGCTGACTCTCC 480
consensus_11088#3      ATCGGCACGAGGGTTGTGGGTATAGTGTTTGCAGTGTTTGCTAATTATTTTCAACTGTGG 72
                                                                                   

consensus_11088#2      TAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGA 409
consensus_11088#4      ------------------------------------------------------------
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      TAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGA 498
consensus_11088#0      TAAAGATTATGGCGAAAATCCACCGACATCATGTTCAAAAGATGGCGTACAATTTACAGA 540
consensus_11088#3      AGCATTCATATGTGGTCTCGGGCTGATTGTGGTTGGTGCACTTGGGCTCCATTCTGTTGT 132
                                                                                   

consensus_11088#2      GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTA- 468
consensus_11088#4      -----------------------------GCAAAGGGCCCCCCAAAGGTATCAAAGGTA- 30
consensus_11088#5      -----------------------------------------------CTATCATAGTTA- 12
consensus_11088#1      GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTA- 557
consensus_11088#0      GGGATGTATTAAAAAGGTCAGCGATCTAAGCAAAGCGCACCTCAATGCTATCATAGTTA- 599
consensus_11088#3      AAATCACTGGAGCGAAATTGAACCCCCACTACAATCTCTTATTATCTTCATTATTGCTCT 192
                                                                        ** *  * *  

consensus_11088#2      -GCGTGTTTC-TGTTCGCATTGGTC-CAAATGATTTGTCTAGTATTTGCAGTATGT-GTT 524
consensus_11088#4      -GGGGGGTTT-TGTTCGCATTGGGC-CAAAAGATTTGTTTAGGATTTGCAGGATGG-GTT 86
consensus_11088#5      -GCGTTGTTTCTGTTCGCATTGGTC-CAAATGATTTGTCTAGTATTTGCAGTATATTGTT 70
consensus_11088#1      -GCGT-GTTTCTGTTCGCATTGGTC-CAAATGATTTGTCTAGTATTTGCAGTATGT-GTT 613
consensus_11088#0      -GCGT-GTTTCTGTTCGCATTGGTC-CAAATGATTTGTCTAGTATTTGCAGTATGT-GTT 655
consensus_11088#3      CGGATGCTTCTTATTTGTTTTGGGGGCTTTAGGGATGTTTGGAGCATGCATGAAGAATGT 252
                        *     **  * ** *  ****   *    *   *** * *    ****  *      *

consensus_11088#2      CTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAA 584
consensus_11088#4      TTATTGGGTATAAAGGGCGGGGGCGATGAATAGAATGCCCTTTCGAAAACGCTTAGTGAA 146
consensus_11088#5      CTATTGGCTATTAAATGTGCT--CGGTGAGCTAGTTAATT-------------------- 108
consensus_11088#1      CTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAA 673
consensus_11088#0      CTATTGGCTATAAAGCGCGGTGACGATGAATAGAATGACATTACGAAAACGCTTAGTGAA 715
consensus_11088#3      TTGTT---TATTAACGACGTATTGTATTCTTCTATCAATTTTAATGGTTGCCGAAATAGC 309
                        * **   *** **    *       *                                 

consensus_11088#2      AAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTA 644
consensus_11088#4      AAAATAAACAGAAACCCCCCCTTAAAAAATTAAGGGAAAAACCCTAATTTTTCCCCCTTA 206
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      AAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACC-TAATTNTTCACACTTA 732
consensus_11088#0      AAAATAAACAGAAAACAACCATTAAAAAATTAAGCGAAAAACCCTAATTTTTCACACTTA 775
consensus_11088#3      AGCAGGAATATTTGCTATAGTAGAAAAGCCCAAGGTCAAAAAACACATCACTAGTGCATT 369
                                                                                   

consensus_11088#2      GCCGGAN--AATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAA 702
consensus_11088#4      GCCGGAA--AAAATTTACCCCTTATTTTTAAAAACAGGGGGGGTTATATTATGGGGGGAA 264
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      GCCGGAA--A-TATTTACTCATTATTNT-ATATACAGTGGAG-TTATATTATGTGAGTAA 787
consensus_11088#0      GCCGGAA--AATATTTACTCATTATTTTTATATACAGTGGAGTTTATATTATGTGAGTAA 833
consensus_11088#3      AAAAAAATTAGTAGATAAGTACCGTAATGACGAACATGTTCGAAAAGTTTTTGATGAAAT 429
                                                                                   

consensus_11088#2      TTNTCGACTTTGTGTTTCATCTCTTTCATAAACTN------------------------- 737
consensus_11088#4      TTTTCGACTTTGGGGTTCATTTCTTTCAAAAAACTTT----------------------- 301
consensus_11088#5      ------------------------------------------------------------
consensus_11088#1      TTT-CGACTTTGT-TTNCATCTCTTCAATAACTTGTCACTTATCATATGAAGTAGTAACT 845
consensus_11088#0      TTTTCGACTTTGTGTTTCATCTCTTTCAATAAACTTTGTACACCTTAATCAATATGAAGT 893
consensus_11088#3      CCAACAAAAATTACATTGCTGTG------------------------------------- 452
                                                                                   

consensus_11088#2      ----------------------------------------
consensus_11088#4      ----------------------------------------
consensus_11088#5      ----------------------------------------
consensus_11088#1      CTGATG---------------------------------- 851
consensus_11088#0      TAGTAAACTTCTGATTGTGCTTTTAACAGGACGATTCAAT 933
consensus_11088#3      ----------------------------------------
                                                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)