These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11095#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 982 fasta sequence [ACCCGGTAT-ACCAC-CACCAAG-TAGAATAATTAGAATTAATCTGA-CAA-CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC-TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA-ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC-AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG-CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATAG] [+] EMBL CD125916 [ACCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTACAGGATCTTTTAGCCATCCCTCC ] [+] EMBL CD125879 [ACCCGGTATCACCAA CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAAT ] [+] EMBL CD125908 [ACCCGGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCGAGTACAACTTGAAGTTAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCCAATAGTTA ] [+] EMBL CD126181 [ACCCGGTAT AC G CACCAAGATAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCg ] [+] EMBL CD126168 [ACCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCCAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGT ] [+] EMBL CD126114 [ACCCGGTA A CAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCAAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGGAATCTCAG CA ] [+] EMBL CD125911 [ CCCGGTAT A CAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGGTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AGTTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTA ] [-] EMBL CD125900 [gCCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAAC AGACAA ] [+] EMBL CD125931 [ aCCGGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAGTGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGT ] [+] EMBL CD126049 [ CCCGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATNACCATTATGAATGAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGATTGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAG ] [+] EMBL CD126154 [ aCCGGT T A CAG CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTACATAAAAACTGGAATCTCAGg ] [+] EMBL CD126158 [ CCGGTATCACCACGCACCAAG TAGAATAATTAGAATTAATCTGAGCAAGCACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCCGTGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAG ] [-] EMBL CD164830 [ AATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAGTAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CA ] [-] EMBL CD126009 [ AATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGCAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAAT ] [-] EMBL CD126151 [ GCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAACAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAcgacaggct ] [+] EMBL CD126028 [ ggAATGACCGCGAGTAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAAT ] [+] EMBL CD125956 [ aCCAACCTGTGGATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTANATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGA ] [-] EMBL CD125940 [ ccCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTACAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGAC ] [-] EMBL CD125982 [ CAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACGACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGCTTTGTTGCTATAAGTg ] [-] EMBL CD126019 [ C TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAAATTGTAAGGTA ] [+] EMBL CD094875 [ AACAAATAA ACTAATCCAACTCGCCAAAATTTATGGACGATTTCAAGTAAAAGACCAAGTACAACTCGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT ] [+] EMBL CD095363 [ AACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT ] [+] EMBL CD094763 [ AACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT ] [+] EMBL CD125936 [ gAAATAAGACTAATCCTAGTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGACATAAGCCTGTATA ] [+] EMBL CD125955 [ AGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGCAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAAT ] [-] EMBL CD191389 [ AGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTT ] [-] EMBL CD094609 [ GGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAAAATTTACAGCGACAGCCCGCTGATGCCCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATAG] [-] EMBL BG931300 [ ggTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGTTTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGCGCGCAGATTGCTAGAC ] [+] EMBL CD156680 [ GAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGGGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTGCTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATA ] consensusID : consensus_11095#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 483 fasta sequence [ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGATATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATTACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAAACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGCTATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAAGTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAA] [+] EMBL CD126050 [ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGATATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATTACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAAACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGCTATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAAGTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAA] [+] EMBL CD126096 [ ATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTG ] consensusID : consensus_11095#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 341 fasta sequence [GGTAATGCCCTGGCGACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCAATAGTTAT] [+] EMBL CD126055 [GGTAATGCCCTGGCGACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCAATAGTTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11095#0 ACCCGGTATACCACCACCAAGTAGAATAATTAGAATTAATCTGACAACACCACTTGATAT 60 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ---ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGAT 57 consensus_11095#0 AAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGT 120 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATT 117 consensus_11095#0 AGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCCTGCCAACAAAACAAA 180 consensus_11095#2 ----------------------------------------GGTAATGCCCTGGCGACAAA 20 consensus_11095#1 ACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAA 177 * * * *** consensus_11095#0 -----TGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAA-C 234 consensus_11095#2 -----TGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAA-C 74 consensus_11095#1 ACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGC 237 ********************************* ******************* * consensus_11095#0 TA-ATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAA 293 consensus_11095#2 TA-ATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAA 133 consensus_11095#1 TATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAA 297 ** ************ ****** * *********** * ******************* consensus_11095#0 GTAAACAATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATC 353 consensus_11095#2 GTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATC 193 consensus_11095#1 GTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATC 357 ****** ** ** ***** ********* * ***************************** consensus_11095#0 TCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 413 consensus_11095#2 TCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 253 consensus_11095#1 TCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 417 ****** ***************************************************** consensus_11095#0 ATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 473 consensus_11095#2 ATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 313 consensus_11095#1 ATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 477 ************************ *********************************** consensus_11095#0 TAAAAACTGCAATCTCAGCAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGT 533 consensus_11095#2 TAAAAACTGCAATCTCAGCAATAGTTAT-------------------------------- 341 consensus_11095#1 TAAAAA------------------------------------------------------ 483 ****** consensus_11095#0 CATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCAT 593 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ------------------------------------------------------------ consensus_11095#0 CGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAG 653 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ------------------------------------------------------------ consensus_11095#0 CCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCAT 713 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ------------------------------------------------------------ consensus_11095#0 CCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCAT 773 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ------------------------------------------------------------ consensus_11095#0 CTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTC 833 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ------------------------------------------------------------ consensus_11095#0 TTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGA 893 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ------------------------------------------------------------ consensus_11095#0 ACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAA 953 consensus_11095#2 ------------------------------------------------------------ consensus_11095#1 ------------------------------------------------------------ consensus_11095#0 AAAGTGAGTATACCAGCTGGTTTATATAG 982 consensus_11095#2 ----------------------------- consensus_11095#1 ----------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||