These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11099#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 33 consensus length = 505 fasta sequence [GACACAGGAGTGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC-TGGTACTGAAAGTGAAGTGAT-AG-ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACATTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCATCACTTACGTCTCTATCGTCGACTGTACAGTCTTGTTGACCATCGTTGTGT] [+] EMBL CD177825 [GACACAGGAGTGTAGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGCACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAAAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAAACGCAGGATCTTTCTTAAAACCACCTACTTAATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGCCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACTACTCAAAGT CTTTGCAACA ] [+] EMBL CD177856 [ GTGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177907 [ GTGTTGCAAAACCTGTGAATCTTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTTTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177888 [ GTGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177898 [ GTGTTGCAAAACCTGTGAATCTTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177875 [ GTGTTGCAAAACCTGTGAATATGGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177886 [ GTGTTGCAAAACCTGTTAATATGGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177834 [ GTGTTGCAAAGCATGTGAATATTGACAAGCTATCAGGAAAGC TGGTCCTGAAAGTGAAGTGAT AGTATAACATCTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAAACTGTTCTGAAAACGCAGGATCTTTCTTAGAACCACCTACTTTATCTATCAAAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177871 [ GTGTTGCAAAACATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177901 [ TGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAGTACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACA ] [+] EMBL CD177838 [ TGTTGCAAACCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAAAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177870 [ TGTTGCGAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGCCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [-] EMBL CD091788 [ TGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACAc ] [+] EMBL CD177810 [ AGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGAGGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAAGCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177908 [ aaccTGTTAATCTGGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTGTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD091445 [ ATAGTCAACCGGTCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGT ] [+] EMBL CD091436 [ ATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAGCCACCTACTTCATCTATCAGAAGACCATCCGGCTGCCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGT ] [+] EMBL CD122235 [ ATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGT ] [-] EMBL CD178078 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTG ] [-] EMBL CD178040 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTG ] [-] EMBL CD177998 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGCTCGACCA ] [-] EMBL CD160680 [ TTGTCAAGCTATCAGGAAAGCGTGGTACTGAAAGTGGA TGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGCTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCGGAGCAACg ] [-] EMBL CD160687 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTG ] [+] EMBL CD177812 [ TCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCTTGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177851 [ aaGAAATC TGGTACTGAAAGTGAAGTGAT AT ATAACACCTCAACTCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAAACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTTTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACA ] [+] EMBL CD177847 [ aaGAAAGC TGGTTCTGAAGGTGAAGTGAT AT ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGACAAAACATTCAAATACATCCGCACACTGTTCTAAACACGCAGGATCTTTCTTAGAACCACCTACTTAATCTATCAAAAAACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177865 [ GAAAGTGAAGTGATAAT ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACACAGGATCTTTCTTATAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [+] EMBL CD177842 [ ATCAGGAGAATCCTTTGTATCTATGTTCGTCAAAACATTCAAATACATCCGCAGGCTGTTCTGAAAACGCAGGATCTTTCTTAAAACCACTTACTTCATCTATCAAAAAACCATCCGGCTACCTTTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] [-] EMBL CD155632 [ ATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCC TTACAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCAT ] [-] EMBL CD155590 [ ATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCC TTACAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCAT ] [+] EMBL CD177850 [ agTACATCCGCAGACTGTTCTGAAAACGCAGGATCTTTCTTAAAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACA ] [-] EMBL CD160667 [ TCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACA CCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCC TTACAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCATCACTTACGTCTCTATCGTCGACTGTACAGTCTTGTTGACCATCGTTGTGT] [+] EMBL CD177854 [ aaaaGCAGGATCTTTCTTAAAACCACCTACTTCATCTATCAAAAAACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||