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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11115#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1480 fasta sequence
[CGCAATGGCTGCTCTTGAAGTTGAATCGTACCCACGTCGGTCGCCAAAATATTTGTCTGGAGAACCCTCCAGGAAAGTCAAACGTGAAGCTGAAAAAGGGACTTTGGATCCTACTCCTCCTCCCACTGATGGGATAAAGAATTATTATATGAATAAGATCGATGAACATCAATTTATATACACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA-TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT-CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTCCCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AI976129 [CGCAATGGCTGCTCTTGAAGTTGAATCGTACCCACGTCGGTCGCCAAAATATTTGTCTGGAGAACCCTCCAGGAAAGTCAAACGTGAAGCTGAAAAAGGGACTTTGGATCCTACTCCTCCTCCCACTGATGGGATAAAGAATTATTATATGAATAAGATCGATGAACATCAATTTATATACACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTATGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTATATTAGCAGATCAAAGAAATTAAA ]
[-] EMBL CD160013 [ AGAATTATTATATGAATAAGATCGATGAACATCAATTTATATACACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAA ]
[+] EMBL BG930850 [ tTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAG ]
[-] EMBL BG931249 [ TCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGAt ]
[-] EMBL BG931448 [ GAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAATTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCTTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCTTAGGAATAGCACAACTTAAAGGCGTGTTATTATATGGAC ]
[-] EMBL BG931220 [ GATATAAAGAAAGTCCTGGTCAAAGTACAACCCGAAGGGACATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGAg ]
[+] EMBL AI975510 [ TGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCATAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCT ]
[-] EMBL BG930177 [ TGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGATCCCC ]
[-] EMBL BG931005 [ AAATACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATTAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTTAAGGCGTGTTATTATATGGAC ]
[-] EMBL CD180405 [ CATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCCTTTTGATGCCCTAGGAATAGCACAACCTAAGGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTC ]
[-] EMBL BG930203 [ TAGTTACACGTTGCA TAAAATTTT CCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGACCCCCCgt ]
[+] EMBL CD128986 [ catgtatAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAGAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGAACGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTC AAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGC ]
[+] EMBL CD180149 [ GAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCATAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTCATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGAACTGGCCGAATTGATCGGAA ]
[-] EMBL CD130746 [ GTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTC ]
[+] EMBL CD128765 [ TCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAG ]
[+] EMBL CD083915 [ gGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACT ]
[-] EMBL CD115158 [ GATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTGTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGGCATACTTGATTCAGCTCTTCTAAGACGTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCTGTGCAAAAG ]
[+] EMBL CD135711 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATC ]
[+] EMBL CD151886 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATC ]
[+] EMBL CD135702 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGC ]
[+] EMBL CD135677 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGC ]
[+] EMBL CD135712 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAGATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGC ]
[-] EMBL CD113690 [ TGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCC ]
[-] EMBL CD113629 [ TGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCC ]
[-] EMBL CD061655 [ ACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGAAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAACTAca ]
[-] EMBL CD061636 [ ACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGAAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGC AGAAGATTTTGAACTA CAG TGCTA ]
[+] EMBL AA629491 [ ACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTNAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCANAAGTCNAANGAATGTGTTCGGAAGCCGGTATGTATGCGTTACGAGAACGTCNGGTTCATGTTACNCAAGAANA TTTGAATTAGCA ]
[-] EMBL AI395530 [ ACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTCCCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11115#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 465 fasta sequence
[AGCTGCATTACCGGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAACTAGGGTTTTGTTCTAATTATGTAAATTGTAGGTAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGT]
[-] EMBL BF936521 [AGCTGCATTACCGGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAACTAGGGTTTTGTTCTAATTATGTAAATTGTAGGTAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGT]
[-] EMBL AA999634 [ ATTAGCAGTTGCTAAGGTGATGCAAAAATTTTCTGAGGAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTANTTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATGGCTCCCATAAACTGNTTT ]
consensusID : consensus_11115#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 450 fasta sequence
[GTATTGTTATGGATGGGGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCACATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGA]
[+] EMBL BG930562 [GTATTGTTATGGATGGGGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCACATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGA]
[+] EMBL BG930553 [ TATTGTGATGGATGGGGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGA]
consensusID : consensus_11115#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 339 fasta sequence
[CGCGGCCAGAATTCGGTCCGAGGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTNCATAATTTTCATGGATGAAGTTGATTCGAT]
[+] EMBL CD077696 [CGCGGCCAGAATTCGGTCCGAGGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTNCATAATTTTCATGGATGAAGTTGATTCGAT]
consensusID : consensus_11115#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 271 fasta sequence
[TCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGACCCCCCGTCTATCACA]
[-] EMBL BG931154 [TCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGACCCCCCGTCTATCACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11115#0 CGCAATGGCTGCTCTTGAAGTTGAATCGTACCCACGTCGGTCGCCAAAATATTTGTCTGG 60
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 AGAACCCTCCAGGAAAGTCAAACGTGAAGCTGAAAAAGGGACTTTGGATCCTACTCCTCC 120
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 TCCCACTGATGGGATAAAGAATTATTATATGAATAAGATCGATGAACATCAATTTATATA 180
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 CACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAA 240
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 AGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGA 300
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 AGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATA 360
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 TGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGC 420
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 TCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGT 480
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 GTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTAC--TT-ATGAGATGATTGGAGGCCT 537
consensus_11115#3 -------------------CGCGGCCAGAATTCGGT--CCGAGGAGATGATTGGAGGCCT 39
consensus_11115#2 -GTATTGTTATGGATGGGGGCTCAACGGAACGAGTT--AAACGCTAAAGTTCGGATGCTT 57
consensus_11115#4 ---------------------TCAACGGAACGAGTT--AAACGCTAAAGTTCGGATGCTT 37
consensus_11115#1 ---------AGCTGCATTACCGGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAG 51
* * * * ** *
consensus_11115#0 AGATAAGCAGATCAAAGAAAT---TAAAGAAGTCAT-TGAGCTTCCTGTAAAACACCCAG 593
consensus_11115#3 AGATAAGCAGATCAAAGAAAT---TAAAGAAGTCAT-TGAGCTTCCTGTAAAACACCCAG 95
consensus_11115#2 CGAGAAG--AGTTGCAGCTGT---TACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAA 112
consensus_11115#4 CGAGAAG--AGTTGCAGCTGT---TACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAA 92
consensus_11115#1 CGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGG-TATGTATGCGTTACGAGAACGTC 110
* * ** * ** * * * * * *
consensus_11115#0 AGCTTTTTGAT---------GCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATG 644
consensus_11115#3 AGCTTTTTGAT---------GCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATG 146
consensus_11115#2 AGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGG-GAAATATGTTGTG 171
consensus_11115#4 AGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGG-GAAATATGTTGTG 151
consensus_11115#1 GGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGG-----TGATGCAAAA 165
* * * * * * * ** * * * * **
consensus_11115#0 GACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTA 704
consensus_11115#3 GACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTA 206
consensus_11115#2 GACATC-------GACAAAAACATTGAAATGTCTCACATATCCCC----TAATTGCCGTG 220
consensus_11115#4 GACATC-------GACAAAAACATTGAAATGTCTCAGATATCCCC----TAATTGCCGTG 200
consensus_11115#1 AGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTG 225
* * * * * * * * *
consensus_11115#0 CATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAG-CTAGG 763
consensus_11115#3 CATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAG-CTAGG 265
consensus_11115#2 TGGCTCTCCGAAGCGATAGTTACACG-TTGCATAAAATTTTGCCA-------AG-CAAAG 271
consensus_11115#4 TGGCTCTCCGAAGCGATAGTTACACG-TTGCATAAAATTTTGCCA-------AG-CAAAG 251
consensus_11115#1 T-TTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTT 284
* * ** * ** * *
consensus_11115#0 ATGGTTCGTGAGTTGTTCGTT-ATGGC-GCGAGAACATGCACCTTCCA-TAATTTTCATG 820
consensus_11115#3 ATGGTTCGTGAGTTGTTCGTT-ATGGC-GCGAGAACATGCACCTTNCA-TAATTTTCATG 322
consensus_11115#2 TTGATCCCCTTGT-GTCTTTA-ATGAT-GGTAGAAAAGGTTCCGGACT-CTACTTATGAG 327
consensus_11115#4 TTGACCCCCC----GTCTATC-ACA----------------------------------- 271
consensus_11115#1 TTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATC 344
* * * *
consensus_11115#0 GATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAA 880
consensus_11115#3 GATGAAGTTGATTCGAT------------------------------------------- 339
consensus_11115#2 ATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTA 387
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 GCTCCCATAAACTGCTTTATTTTTAGTAACTAGGGTTTTGTTCTAATTATGTAAATTGTA 404
consensus_11115#0 GTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAAT 940
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 AAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATAT 447
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 GGTAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCG 464
consensus_11115#0 ATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCT 1000
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 GGA--------------------------------------------------------- 450
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 T----------------------------------------------------------- 465
consensus_11115#0 GGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATC 1060
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 CTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCA 1120
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 GAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATG 1180
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 TATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCT 1240
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 AAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGC 1300
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 TTTAAATTTACTTGTTTTATATAACTAAACAGTCCCATTTTCTTTTGTAAAAACGTTACG 1360
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 GGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCC 1420
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
consensus_11115#0 AGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAAAAAAAAAAAAAAAAAAAA 1480
consensus_11115#3 ------------------------------------------------------------
consensus_11115#2 ------------------------------------------------------------
consensus_11115#4 ------------------------------------------------------------
consensus_11115#1 ------------------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||