These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11123#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 32 consensus length = 721 fasta sequence [CAGCCAANAATTTGGCACGAGGGTCTTCGGCGGGCTTATTTTCGCAGTCGCTATTCTTTTGTCTGGGGTATTTATTGTCTGGAAATTGTATAACAAGTCAACTAAGAAAGGTGGACAGCGCCCCCACGTACATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC-AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT-GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG-AAGAAGAGGGATTAGATGCACAACAACAAGATGAC-AAAGCAAAAGCATTAATTAATGCACAAATTATTGCAGCTATTGAAGAAGCAAAAATCATTCCAGTCGAACATTTGGCAATCAATTTAAATTTGAAAACAGAGGTTTGTATAGAAAACATCAAAGCA] [+] EMBL CD079578 [CAGCCAANAATTTGGCACGAGGGTCTTCGGCGGGCTTATTTTCGCAGTCGCTATTCTTTTGTCTGGGGTATTTATTGTCTGGAAATTGTATAACAAGTCAACTAAGAAAGGTGGACAGCGCCCCCACGTACATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCANAAGCATTAATTAATGCACAAATTATTGCAGCTATTGAAGAAGCAAAAATCATTCCAGTCGAACATTTGGCAATCAATTTAAATTTGAAAACAGAGGTTTGTATAGAAAACATCAAAGCA] [+] EMBL CD148963 [ GCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCA ] [+] EMBL CD114790 [ GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA ] [+] EMBL CD114778 [ GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAGGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA ] [+] EMBL CD114828 [ GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTGGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCAAA ] [+] EMBL CD114762 [ GCTGGCAGAGTGCGTCGCTGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGGACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA ] [+] EMBL CD114720 [ GCTGGCAGAGTGCGTCGCCGCGTTGGAAGTGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA ] [+] EMBL CD114780 [ GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCGAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA ] [+] EMBL CD114764 [ GCTGGCAGAGTGCGTCGCTGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAAGAAG ] [-] EMBL CD071909 [ CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACATTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATT ] [-] EMBL CD071968 [ CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATT ] [-] EMBL CD071953 [ CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAGATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAG TTAGTATTG AAGAAGAGGGATT ] [-] EMBL CD144851 [ CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD114665 [ CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC TAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGGAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD144896 [ CTGACAGAGCGCGTCGCCGCGTGGGAAATGTAGGTGGACAGCGCGGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCT AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD114667 [ CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCTGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGGAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD114672 [ CTGGCAGAGTGCGTCGCTGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAATGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD144849 [ CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGACTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD144871 [ cgGGCAGAGTGCGTCGCCGCGTGGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAGTT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [+] EMBL CD138957 [ GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAACACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACCAGATGACAAAAGC AAAGCATTAATTAATGC ] [+] EMBL CD125538 [ GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAGAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCAAAAGCATTAATTAATGC ] [+] EMBL CD182799 [ GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTNGAAAAc ] [+] EMBL CD164774 [ GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAAC ] [+] EMBL CD125531 [ GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTACGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCGGACCAATCAAAGGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCANAAGCATTAATTAATGCACAAATTA ] [+] EMBL CD182867 [ GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCG ] [-] EMBL CD186665 [ TCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAAC ] [-] EMBL CD144894 [ CGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD144874 [ TTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGGGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCCAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCGGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [-] EMBL CD144854 [ TTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG ] [+] EMBL CD184334 [ tcCACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAG ] [-] EMBL CD063395 [ GATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAG ] [+] EMBL CD119697 [ ccttcatGGAAAA CGAAGAC TGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAG TTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCAAAAGCATTAATTAATGCACAAAT ] consensusID : consensus_11123#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 495 fasta sequence [ATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAATGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTANGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGNAGGAGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCCTCAGATGCAGACCAATCAAAAGAAAGTT] [+] EMBL CD183756 [ATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAATGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTANGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGNAGGAGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCCTCAGATGCAGACCAATCAAAAGAAAGTT] consensusID : consensus_11123#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 339 fasta sequence [CGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAGAAGCGGGAAG] [-] EMBL CD144853 [CGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAGAAG ] [+] EMBL CD181471 [ CCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAGAAGCGGGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11123#0 CAGCCAANAATTTGGCACGAGGGTCTTCGGCGGGCTTATTTTCGCAGTCGCTATTCTTTT 60 consensus_11123#2 ------------------------------------------------------------ consensus_11123#1 ------------------------------------------------------------ consensus_11123#0 GTCTGGGGTATTTATTGTCTGGAAATTGTATAACAAGTCAACTAAGAAAGGTGGACAGCG 120 consensus_11123#2 ------------------------------------------------------------ consensus_11123#1 ------------------------------------------------------------ consensus_11123#0 CCCCCACGTACATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGG 180 consensus_11123#2 ------------------------------------------------------------ consensus_11123#1 -----------ATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGG 49 consensus_11123#0 ACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCG 240 consensus_11123#2 ---------------------------------------------------CGTTGGAAA 9 consensus_11123#1 ACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCG 109 ** * * consensus_11123#0 TGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGA 300 consensus_11123#2 TGT---AGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCAGACCAATCAAAAGA 66 consensus_11123#1 TGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGA 169 *** * ** * * * * * *** ********************* consensus_11123#0 AAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAA 360 consensus_11123#2 AAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAA 126 consensus_11123#1 AAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAA 229 ************************************************************ consensus_11123#0 AGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGA 420 consensus_11123#2 AGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGA 186 consensus_11123#1 AGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGA 289 ************************************************************ consensus_11123#0 AATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCA-GCTG 479 consensus_11123#2 AATTGAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCA-GCTG 245 consensus_11123#1 AATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAATGCTGCTGGCAGAGTGCGTCG 349 ************************ ************** ***** * * * * * consensus_11123#0 CTGC--TGAGGCTAAACGTCGTGAAGAAGA---AGCAGCTCGTGAACAAGCTGAATACGA 534 consensus_11123#2 CTGC--TGAGGCTAAACGTCGTGAAGAAGA---AGCAGCTCGTGAACAAGCTGAATACGA 300 consensus_11123#1 CCGCGTTGGAAATGTANGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGA 409 * ** ** * * ** * * ** ***** ** ** * ** consensus_11123#0 GCGCTTAAAACAAGAGTTTAGTATTGAAGAAGAGGGATTAGATGCACAACAACAAGATGA 594 consensus_11123#2 GCGCTTAAAACAAGAGTTTAGTATTGAAGAAGCGGGAAG--------------------- 339 consensus_11123#1 ATCTGNAGGAGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCCTC 469 * * * ** ** * *** * * consensus_11123#0 CAAAGCAAAAGCATTAATTAATGCACAAATTATTGCAGCTATTGAAGAAGCAAAAATCAT 654 consensus_11123#2 ------------------------------------------------------------ consensus_11123#1 AGATGCAGACCAATCAAAAGAAAGTT---------------------------------- 495 consensus_11123#0 TCCAGTCGAACATTTGGCAATCAATTTAAATTTGAAAACAGAGGTTTGTATAGAAAACAT 714 consensus_11123#2 ------------------------------------------------------------ consensus_11123#1 ------------------------------------------------------------ consensus_11123#0 CAAAGCA 721 consensus_11123#2 ------- consensus_11123#1 ------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||