These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11126#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 34 consensus length = 1498 fasta sequence [CTTCGTCCACTTCCGCAACATTGGGTATCAACCTAGCATCGATAAAATCAGTTGCTGGTGTTTCTGCATCCGTACCCCCTATAATTCGTGCTAAATCTGGATACGTTAACACTTATTCTCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGATCAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATGATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTT-CCATCAGAAAAAGTAAAGGAAATATTAGAATCTCATGGCATAAAAACACTAACAGAAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGAACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA-ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC-TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA-GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA-CAGTAGCCTAATTCGC-TAGGCATCTGGAGTTC--TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT-TTTCAT-AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [+] EMBL CD165992 [CTTCGTCCACTTCCGCAACATTGGGTATCAACCTAGCATCGATAAAATCAGTTGCTGGTGTTTCTGCATCCGTACCCCCTATAATTCGTGCTAAATCTGGATACGTTAACACTTATTCCCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGATCAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATGATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTT CCATCAGAAAAAGTAA ] [+] EMBL AI975721 [ AATTCGTGCTAAATCTGGATACGTTAACACTTATTCTCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGATCAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATGATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTTCCCATCAGAAAAAGTTAAGGAAATATTAGAATCTCATGGCATAAAAACACTAACAGAAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTT GTTCAAACAG ] [+] EMBL CD166011 [ ACGCTAACACTTATTCTCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCATCTCCTTGAATGGATCAACTG ] [+] EMBL CD116913 [ AAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGAACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGT ] [+] EMBL CD116620 [ AAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGAACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGC ] [-] EMBL CD126493 [ TCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTTTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTCTTCCAGTGTCGGTGGGAC ] [+] EMBL CD156611 [ gatTCGAG TNTTGAATACGAAGATNCTNATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCATTTGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATCTTTTGGGAGCCTCTCTTTCAACCCCCCATGGTGTGACGAATTTGGCGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGCCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTACAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGCGGGACTGGCGA ] [+] EMBL CD200957 [ TATTTCAACAGATATTTTGGGAGCCTCTCTTT AACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATTGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATATG ] [+] EMBL CD078268 [ CGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAG AAATAATANACCTGNTATTTCT ] [+] EMBL CD078350 [ CGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGCACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGCTATCTCT ] [-] EMBL AI068202 [ TAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067178 [ aCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCATTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067248 [ CTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL CD072910 [ GTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068256 [ ACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068353 [ ACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067744 [ GAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067795 [ ACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTATGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATGTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068002 [ CTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTAAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTA ] [-] EMBL AI067152 [ ATTGGCGCTCTCAGCCTTAAGGAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAGCTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGCTTAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI066997 [ CCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAG TTTCACCAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067605 [ CTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068112 [ CTTAA GAGTCTTTTCTGTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTTATTTCATGAAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067281 [ TAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068131 [ AA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067659 [ AGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068288 [ CCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATNTGTTGGCTAATTTTCTTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068142 [ TTCTATTTTTACAGTGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGTTAATTTTCCTAAGATCATTTACGTTCCCAACTTAAGTTGTATCATAAAATCTGTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TGGGCATATGGAGTTC TATATATATATATATAGGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTGTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCATGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI068281 [ GCGACTTGATTTCTGATTGTAATATGATTTAACTATGTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067454 [ ATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTCTAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI976892 [ TCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCACAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATACGTACACNCCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTAT ] [-] EMBL AI067705 [ ATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTGTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI067089 [ TGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] [-] EMBL AI066967 [ ATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT] consensusID : consensus_11126#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 453 fasta sequence [GAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCAGTCGACTAGGTTTGTTACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACGGCAAATTCAAGCCTGTTGGCTCCCAAGTGTCGTTGGGACTGGTAATAGCGTGTCAATAAGTCTGGGTTTTCATAAGCACCAATTCTAGGGCACATGTGATCTCTCAGAGATATAGGGCTATCTTTCTCGAACGCCGAATTTCGTGTACTGTTTTATAGAGCGTTTGGCGCCTCGCATTAGNGTTTTTCTTGCTC] [+] EMBL AI618796 [GAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCAGTCGACTAGGTTTGTTACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACGGCAAATTCAAGCCTGTTGGCTCCCAAGTGTCGTTGGGACTGGTAATAGCGTGTCAATAAGTCTGGGTTTTCATAAGCACCAATTCTAGGGCACATGTGATCTCTCAGAGATATAGGGCTATCTTTCTCGAACGCCGAATTTCGTGTACTGTTTTATAGAGCGTTTGGCGCCTCGCATTAGNGTTTTTCTTGCTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11126#0 CTTCGTCCACTTCCGCAACATTGGGTATCAACCTAGCATCGATAAAATCAGTTGCTGGTG 60 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 TTTCTGCATCCGTACCCCCTATAATTCGTGCTAAATCTGGATACGTTAACACTTATTCTC 120 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 CTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGAT 180 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 CAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATG 240 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 ATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTTCCATCAGAAAAAGT 300 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 AAAGGAAATATTAGAATCTCATGGCATAAAAACACTAACAGAAGAATCTATCGTGTCTCT 360 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 CGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATC 420 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 ACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGA 480 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 ACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGA 540 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 AAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAAACGAAGATCCTCATCAAAT 600 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 GCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACA 660 consensus_11126#1 ---------------------------------------------------GAAGCAACA 9 ********* consensus_11126#0 TCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATAC 720 consensus_11126#1 TCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATAC 69 ************************************************************ consensus_11126#0 TTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAG 780 consensus_11126#1 TTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAG 129 ************************************************************ consensus_11126#0 AGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTAT 840 consensus_11126#1 AGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTAT 189 ************************************************************ consensus_11126#0 TGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTT 900 consensus_11126#1 TGTCAGTGC-AGTCGACTAGGTTTGTTA-CATCAGGACCTAACCTAACGCAGCTCAGTTT 247 ********* *************** ** ******************************* consensus_11126#0 AGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTCTCCA-GTGTCGGTGGGACTGGTGATA 959 consensus_11126#1 AGAAGCTTTAC-GGCAAATTCAAGCCTGTTGGCTCCCAAGTGTCGTTGGGACTGGTAATA 306 *********** ************* ***** *** ****** ********** *** consensus_11126#0 GCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTC 1019 consensus_11126#1 GCGTGTCAA-TAAGTCTGGGTTTTCATAAGCAC-CAATTCTAGGGCACAT-GTG-ATCTC 362 ********* ** ************** ***** ** * ********* *** * *** consensus_11126#0 TCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACT 1079 consensus_11126#1 TCAGAGATATA-GGGCTAT-CTTTCTCGAACGCCGA-ATTTCGT-GTAC---TGTTT--T 413 *********** ** ** ******** ** **** * ***** **** * ** * consensus_11126#0 ATAGGACGTATTGGCGCTCTCAGCCTTAAGAGTCTTTTCTTTGTTCCTTATTTCTATTTT 1139 consensus_11126#1 ATAGAGCGT-TTGGCGCCTC--GCATTA---GNGTTTTTCTTGCTC-------------- 453 **** *** ******* ** *** * **** *** ** consensus_11126#0 TACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAA 1199 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 GATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA 1259 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 CAGTAGCCTAATTCGCTAGGCATCTGGAGTTCTATATATATATATATATACGTACACACC 1319 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 GTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAA 1379 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 TGTGAGATTCCATGTATTTTTTCATAAAGCCTGCACATTTACCAATTTCATGTATACTTC 1439 consensus_11126#1 ------------------------------------------------------------ consensus_11126#0 GTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT 1498 consensus_11126#1 ----------------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||