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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11134#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1243 fasta sequence
[CGTNACGAAAAGACCTTCAAGGTTGANCGACGTGGCCGCATCGAAACAGTCAGCATTGATCGTNTCAAGCCAGCACACGTCGATGACAGTNCTATACCTGATAAGCCGAGACCCAATGTTAGACCCATCAGAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC-GAGACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATAGGAACCTACCCCTATACTACACGAAAGCTACACTTCTCTCTTTTTCTTTCAT-TTTTTTGTTTACCCCGAGCCTACGCCTTCGACCATCGCTGTTCTGGTATCGTCGACTTCAGTAAATTTTGGCGAAAGCTGGCCTGATCACCCACGCTCTAGTCAACGCACTCAGTCGACCTCTCTGGCTCCAAATACGTATGGTATACATTTGGTCCCGAACATGGNTATTCTGGTCGCATCTGGTTCCTTGGCTCAATCTGGGTTCGTCCTACATCTGCGGCGTTTCTGGTCCGGACCTCTACGAACGCAACTTTCAGATTCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATCAATACGGCACGTTCCTTCTGGTACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTTCCTGTTCTGCCAACGCCTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTGTACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACC]
[+] EMBL SMT14514 [CGTNACGAAAAGACCTTCAAGGTTGANCGACGTGGCCGCATCGAAACAGTCAGCATTGATCGTNTCAAGCCAGCACACGTCGATGACAGTNCTATACCTGATAAGCCGAGACCCAATGTNAGGCCCATCANAGCTTCTAGCGGGATTTCTACATCTACTTCGGATCCCACGCTAGATGCACCTAANACCTCATTCTCACATACCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCAAGTCCAGACCTGCAGACCACACCGCCCTTGACTGTGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCtg ]
[-] EMBL BG931840 [ tCGCATCGAAACAGTCAGCATTGATCGTCTCAAGCCAGCACACGTCGATGACAGTGCTATACCTGATAAGCCGAGACCCAATGTTAGACCCATCAGAGTTTCTAGCGGGATTTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCTGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGAa ]
[+] EMBL AI018947 [ TGCTAGACCCATCAAAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCGGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAGCTACGGATACAGTATAGGNCCCTCCCCCTATACTA ]
[+] EMBL AI976068 [ ACCTATCAGAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCTACAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATAGGAATCTACCCCTATACTACACGAAAGCTACACTTCTCTCTTTTTCTTTCAT TTTTTTGTTTACCCCGAGCCTACGCCTTCGACCATCGCTGTTCTGGTATCGTCGACTTCAGTAAATTTTGGCGAAAGCTGGCCTGATCACCCACGCTCTAGTCAACGCACTCAGTCGACCTCTCTGGCTCCAAATACGTATGGTATACATTTGGTCCCGAACATGGNTATTCTGGTCGCATCTGGTTCCTTGGCTCAATCTGGGTTCGTCCTACATCTGCGGCGTTTCTGGTCCGGACCTCTACGAACGCAACTTTCAGATTCT ]
[+] EMBL BG930940 [ gTCCCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGAGCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGACGGAGACTTCCGTCTCACGTCCAGACCGGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGAGTAACCTCATAACCAGCTACGGATACAGTATAGGAACCTACCCCTATAC ]
[-] EMBL BG931421 [ TCGCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCAGCAGACCACATCGCCCTCGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCGCGACTAACCTCATAACCAACTGCGGATACAGTATAGGAA ]
[-] EMBL BG931222 [ CTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCACATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCTGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCAGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCTGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTGTAGGAATCTACCCCTATAATACACGAAAGCTACACTTTTCTCTTTTTCTTTCATGTTTTTTGTTgat ]
[+] EMBL BG932866 [ GATCTCTCTGACTCCAAATACGTATGATATACATTTGGTCCCGAACATGGTTATCCTGGTCGCATCTGGTTCCTTGGCTCAATCTGGTTTCGTCCTACATCTGCAGCGTTTCTGGTCCGGACCTCTACGAACGCAACTTTCAGATTCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATCAATACGGCACGTTCCTTCTGGTACCGTTCTACGTCAA ]
[-] EMBL AI976827 [ TCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATTAATACAGTACGTTCCTTCTGGTACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTTCCTGTTCTGCCAACGCCTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTGTACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACC]
[-] EMBL BF936268 [ CGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTGTACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTG ]
[-] EMBL AI018876 [ ACNCGATTGGAATANCGGAAACAATTATTATTATTGTANCCAAATGTNCCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGNTTTNTCACGCACTGCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGATACCACGAGATCGCCNATAAATATACTTG ]
consensusID : consensus_11134#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1001 fasta sequence
[ACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCCAACGTTTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATCCTTTCTAGCGGGGGGCTC-CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC-ATATACCGCCTGGTTTGG-TTCGAGCTTGC-T-CACGCACTGCTTGTTCGCTTG-TACTCTTTGGCACGTCTCGGTATTATTTCG-ATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTACGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACGTAATCGAATAGTAGTGGTGATCATAGTCCGTCCACGACTCGACATCCACTAGAGTCTACATACGCTGAGCTGATTTTTCGAACACGTTTCAACCTCTGGACAACCTCCCAGAGAACATTACTACGACAGGACTCAGTTTGCAAATATATGTATCGAAGATGATACAGATAGCTTATTCATGATTGAAAACTGATTGGAAAACTCTGTTCTGTATGTTGTCAAGTTCTACTAAACATCAGGGAGAAAATTGGAAGGCATATTCAGATTTTCGTTTTATTTCTACATCCAATTATACACCATAATATCGAGTTACTGAGTTTAACAACCTCACTGTGTTGCTGTAATGCGACAATCAGGACTATTGCATCACATTACTAACCTGTCAAAAGGTTCCCTACCTTCTCGTATTTTACAGATTTTTTCCGCATCACACCCAAGGTGGATGGGTTTTGTGCCAATGATGAACCCCTTAAAGTGTGAACTGAATGGTCTGTTTTTAAAATATTCCTTGTAAAGTCTTTTTATGTCATATTATATAT]
[-] EMBL AI018990 [ACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCCAACGTTTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATCCTTTCTAGCGGGGGGCTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATNCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ]
[+] EMBL BF440154 [ TTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACT CCTGTTCTGCCAACGTTTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACGATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTATTCC ATATACCACCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTT ]
[-] EMBL SMT14527 [ GGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCNAACGCCTTCGTCCTANAATGGCACGTTTCGCGATCAGTCCCACGAACGAAAGCGCTACGTATCGAAAGAGTAAACCCTTTCTAGCGGGGGGCNC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCC TTNCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATACTTG ]
[-] EMBL SMT14605 [ GTCCTANAATTGCACGTTTCGCGANCAGTCCCACGAATGAAACCGCTACGTAACGAAAGTGTAAATCCTTTCTAGCGGGGGGCNC CCNTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTANCCCGTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ]
[-] EMBL SMT14513 [ GTTCCGCGATCAGNCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATCCTTTCTAGCGGGGGGCTC NTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAANTANTATTATTGTAACCAATTGTACCAGAGANTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACNTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTTN T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATACTTG ]
[-] EMBL AI018879 [ AAACCGCTACGTATCGAAAGTGTAAANCCTTTCTAGCGGGGGGCNC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGANTGTTTTACTGTATTTGTTTAACTGTATCCG TTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATACTTG ]
[-] EMBL AI018909 [ AGTGTAAANCCTTTCTAGCGGGGGGCCCNCNGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTACNNCTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ]
[-] EMBL AI018956 [ GTAAATCCTTTCTAGCGGGGGGCTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ]
[+] EMBL BG930683 [ aTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTAT CCGCCTTGTTTGG TTCGAGCTTGC T CACGTACTGCTTATTCGCTTG TACTCTTTGACACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTACGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACGTAATCGAATAGTAGTGGTGATCATAGTCCGTCCACGACTCGACATCCA ]
[+] EMBL BG931102 [ aTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTAT CCGCCTTGTTTGG TTCGAGCTTGC T CACGTACTGCTTATTCGCTTG TACTCTTTGACACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTACGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACG ]
[-] EMBL SM617 [ ACCAA TGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTATTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ]
[-] EMBL AI018944 [ ACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTG T CACGCACTGCTTGTTCGCTTGTTACTCTTTGGCACGTCTCGGTATTATTTCGAATACCACGAGATCGCCAATAAATATACTTG ]
[-] EMBL AI018954 [ CCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTNGTTCG ATACCACGAGATCGCTTTTAAATATACTTG ]
[-] EMBL AI018913 [ CCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACNNCTTGTTCC ATATACCNCCTGGTTTGGTTTCGAGCTTGC TCCACGCACTGCTTATTCGCTTG TACTC TTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCNCCNANAAATATACTTG ]
[-] EMBL AI018900 [ AATTGTACCAGAGANTGTTTTACTGTANTTGTTTAACTGTATCCGTTTCACNTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTNTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATAC ]
[-] EMBL AI019017 [ tCCAGAGGTTGTTTTACTGTATTTGTTTAACTGATTCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTNCGT CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAA ]
[-] EMBL AI975516 [ AAGCCTTCTGGTTTACGGGCTATCAAGGGAACCAAGTCATATTTGTACGCGTAATCGAATAGTAGTGTTGATCATAGTCCGTCCACGACTCGACATCCACTAGAGTCTACATACGCTGAGCTGATTTTTCGAACACGTTTCAACCTCTGGACAACCTCCCAGAGAACATTACTACGACAGGACTCAGTTTGCAAATATATGTATCGAAGATGATACAGATAGCTTATTCATGATTGAAAACTGATTGGAAAACTCTGTTCTGTATGTTGTCAAGTTCTACTAAACATCAGGGAGAAAATTGGAAGGCATATTCAGATTTTCGTTTTATTTCTACATCCAATTATACACCATAATATCGAGTTACTGAGTTTAACAACCTCACTGTGTTGCTGTAATGCGACAATCAGGACTATTGCATCACATTACTAACCTGTCAAAAGGTTCCCTACCTTCTCGTATTTTACAGATTTTTTCCGCATCACACCCAAGGTGGATGGGTTTTGTGCCAATGATGAACCCCTTAAAGTGTGAACTGAATGGTCTGTTTTTAAAATATTCCTTGTAAAGTCTTTTTATGTCATATTATATAT]
consensusID : consensus_11134#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence
[TCTGATCTTAACCCAGTGGGGGTCGATTCGAATATAGGTGTTACTGGTTAATAGTTGTCAAACTACAATACTGGGCGTATCTTGAGAACTACACGCATGACACACTCCTCTATTCTTTTCTTTGATTTTTTTCTGTATCTTGATCCCACGCCTCCGACCATCGCCACGTTGGTACCGTCGACTTCAATTAACCCTGGCGAAAGCTGGCCTGATCACACACGCTCTAGTCAAAGCACTCAGTCGATGTTTCTGGCATGCGTTCGGACCCGAACTTGGATATTGTTGTCGCGCCTGGTTTCTTGGCTCAATCTAGTTCCGTCATACGTCTACAGTGTTTTGTGGTCCGGACCACTACGAACGCAATCCAGTGCTATGCCTCCACCAATGATGGCAATGAAGACGATAAAGATCAGTTCTACGAGAGGCTGCAGTCGATCGCAGAGAAGTGCCTAAGAAAAGGATCTAACCATCCTGATAGGTGACCTAAGCACCAGAGTCGTGATGGACAACACTGGGTACAAAAATCATGGGACGATATGGGCTGGGTGAAATGAATGAGAATGGTGAGGGATTCGCAAATTTACGTGC]
[+] EMBL CD088116 [TCTGATCTTAACCCAGTGGGGGTCGATTCGAATATAGGTGTTACTGGTTAATAGTTGTCAAACTACAATACTGGGCGTATCTTGAGAACTACACGCATGACACACTCCTCTATTCTTTTCTTTGATTTTTTTCTGTATCTTGATCCCACGCCTCCGACCATCGCCACGTTGGTACCGTCGACTTCAATTAACCCTGGCGAAAGCTGGCCTGATCACACACGCTCTAGTCAAAGCACTCAGTCGATGTTTCTGGCATGCGTTCGGACCCGAACTTGGATATTGTTGTCGCGCCTGGTTTCTTGGCTCAATCTAGTTCCGTCATACGTCTACAGTGTTTTGTGGTCCGGACCACTACGAACGCAATCCAGTGCTATGCCTCCACCAATGATGGCAATGAAGACGATAAAGATCAGTTCTACGAGAGGCTGCAGTCGATCGCAGAGAAGTGCCTAAGAAAAGGATCTAACCATCCTGATAGGTGACCTAAGCACCAGAGTCGTGATGGACAACACTGGGTACAAAAATCATGGGACGATATGGGCTGGGTGAAATGAATGAGAATGGTGAGGGATTCGCAAATTTACGTGC]
consensusID : consensus_11134#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 366 fasta sequence
[TCAAATATGGTATTGTGATACACGGGGGGTCCCATGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGACGAAACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATACGAATCTACCCCTATACTACACGAAAGCTACACTTTTCTCTTTTTCTTTCATTTTTTTGTTTACCCCGAGCCCCCGTTCATCACAATATCAT]
[+] EMBL BG931308 [TCAAATATGGTATTGTGATACACGGGGGGTCCCATGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGACGAAACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATACGAATCTACCCCTATACTACACGAAAGCTACACTTTTCTCTTTTTCTTTCATTTTTTTGTTTACCCCGAGCCCCCGTTCATCACAATATCAT]
consensusID : consensus_11134#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 194 fasta sequence
[TATTGTGATCGACGGGGGTTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTATGCTTTCGCGACTAACCTCATAACCCACTGCGGATACAGTATAGGACCCTAACCCTCTACTACACGAATGATACACTTTTCTCTTTTTCTCTCAATTTTTTTTGTTTACCCCGAC]
[-] EMBL BG931462 [TATTGTGATCGACGGGGGTTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTATGCTTTCGCGACTAACCTCATAACCCACTGCGGATACAGTATAGGACCCTAACCCTCTACTACACGAATGATACACTTTTCTCTTTTTCTCTCAATTTTTTTTGTTTACCCCGAC]
[+] EMBL BG930912 [ gTCACGAGGTTCGAACGAGACTACCGTGTCACGTTCCGGTCGCCGAGTACGCTTACCCGTATGCTTTCGCGACTAACCTCATAACCAACTGCGGATACAGTATAGGACCCTAACCCTCTACTACACGAATGCTACACTTTTCTCTTTTGCTCTCAATTTTTTTAGTTTACCCCGA ]
consensusID : consensus_11134#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 156 fasta sequence
[TTCGGCACGAGATTTGTTTAACTGTATCCGTTTCACTTCTTATTCCATATACCACCTGGTATTGGTTCGAGCTTGCTCACGCACTGCTTGTACGCTTGTGCACCATGGCACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACT]
[+] EMBL AW146515 [TTCGGCACGAGATTTGTTTAACTGTATCCGTTTCACTTCTTATTCCATATACCACCTGGTATTGGTTCGAGCTTGCTCACGCACTGCTTGTACGCTTGTGCACCATGGCACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACT]
consensusID : consensus_11134#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 149 fasta sequence
[ATTGGTTTAACTGGTATCAGTTCACTTCTTGGTTCCGCTATCCGCCTTGTTTNGGTTCGAAGCTNNTCACGCACTTCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGAATACCACGAGATCGCCAATAAATATACTTG]
[-] EMBL AI018946 [ATTGGTTTAACTGGTATCAGTTCACTTCTTGGTTCCGCTATCCGCCTTGTTTNGGTTCGAAGCTNNTCACGCACTTCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGAATACCACGAGATCGCCAATAAATATACTTG]
consensusID : consensus_11134#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 137 fasta sequence
[AGAGATTGTTTTACTGTATTTGTTTATACTGTATCAGTTTCACTTCTTGTTCCGTTATCCGCCTTGTTTGGTTCGAGCCTTGCTCACNTCTATCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGATACCACA]
[-] EMBL AI018929 [AGAGATTGTTTTACTGTATTTGTTTATACTGTATCAGTTTCACTTCTTGTTCCGTTATCCGCCTTGTTTGGTTCGAGCCTTGCTCACNTCTATCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGATACCACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 CGTNACGAAAAGACCTTCAAGGTTGANCGACGTGGCCGCATCGAAACAGTCAGCATTGAT 60
consensus_11134#1 ------------------------------------------------------------
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 CGTNTCAAGCCAGCACACGTCGATGACAGTNCTATACCTGATAAGCCGAGACCCAATGTT 120
consensus_11134#1 -----------------------------------------ACCGTTCTACGTCAAAGAC 19
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 -----------------------------------------------------TCTGATC 7
consensus_11134#3 ---------------TCAAATATGGTATTGTGATACACGGGGGGTCCCATGCTAGATGCA 45
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 AGACCCATCAGAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCA 180
consensus_11134#1 TTTTGGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCCAACGTTTTCGTCCTAC 79
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 TTAACCCAGTGGGGGTCGATTCGAATATAGGTGTTACTGGTTAATAGTTGTCAAACTACA 67
consensus_11134#3 CCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC 105
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 CCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC 240
consensus_11134#1 AATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATC 139
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ATACTGGGCGTATCTTGAGAACTACACGCATGACACACTCCTCTATTCTTTTCTTTGATT 127
consensus_11134#3 GAAACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTG-ACTGCGGATGAGAT 164
consensus_11134#4 --------------------------------------------T-ATTGTGATCGA--- 12
consensus_11134#0 GAGACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTG-ACTGCGGATGAGAT 299
consensus_11134#1 CTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAG-AACACGATTGGAAT 198
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 TTTTTCTGTATCTTGATCCCACGCCTCCGACCATCGCCACGTTGGTACCGTCGACTTCAA 187
consensus_11134#3 TGCAGGCTCACGAGGTTCGAACGAGACTACCGT--CTCACGTTCCGGTCGCCGAGTACGC 222
consensus_11134#4 CGGGGGTTCACGAGGTTCGAACGAGACTACCGT--CTCACGTTCCGGTCGCCGAGTACGC 70
consensus_11134#0 TGCAGGCTCACGAGGTTCGAACGAGACTACCGT--CTCACGTTCCGGTCGCCGAGTACGC 357
consensus_11134#1 AATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGT 258
consensus_11134#5 -------------------------------------------TTCGGCACGAGATTTGT 17
consensus_11134#6 ------------------------------------------------------ATTGGT 6
consensus_11134#7 -------------------------------------AGAGATTGTTTTACTGTATTTGT 23
consensus_11134#2 TTAACCCTGGCGAAAGCTGGCCTGATCACACAC--GCTCTAGTCAAAGCACTCAGTCGAT 245
*
consensus_11134#3 TTA-CCCGTACGC-TTTCTCGACTAA-CCTCATAAC----CAACTACGGATACAGTATAC 275
consensus_11134#4 TTA-CCCGTATGC-TTTCGCGACTAA-CCTCATAAC----CCACTGCGGATACAGTATAG 123
consensus_11134#0 TTA-CCCGTACGC-TTTCTCGACTAA-CCTCATAAC----CAACTACGGATACAGTATAG 410
consensus_11134#1 TTA-ACTGTATCCGTTTCACTTCTTG-TTCCATATA----CCGC--CTGGT-TTG-GTTC 308
consensus_11134#5 TTA-ACTGTATCCGTTTCACTTCTTA-TTCCATATA----CCAC--CTGGTATTG-GTTC 68
consensus_11134#6 TTA-ACTGGTATCAGTTCACTTCTTGGTTCCGCTAT----CCGC--CTTGTTTNG-GTTC 58
consensus_11134#7 TTATACTGTATCAGTTTCACTTCTTG-TTCCGTTAT----CCGC--CTTGT-TTG-GTTC 74
consensus_11134#2 GTTTCTGGCATGCGTTCGGACCCGAACTTGGATATTGTTGTCGCGCCTGGTTTCTTGGCT 305
* * * * * * *
consensus_11134#3 GAATCTACCCCTATACTACACGAAAGCT-ACACTTTTCTCTTTTTCTTTCA--TTTTTTT 332
consensus_11134#4 GACCCTAACCCTCTACTACACGAATGAT-ACACTTTTCTCTTTTTCTCTCAATTTTTTTT 182
consensus_11134#0 GAACCTACCCCTATACTACACGAAAGCT-ACACTTCTCTCTTTTTCTTTCA--TTTTTTT 467
consensus_11134#1 GAGCTTGCTCACGCACTGCTTGTTCGCTTGTACTCTTTGGCACGTCTCGGTA-TTATTTC 367
consensus_11134#5 GAGCTTGCTCACGCACTGCTTGTACGCTTGTGCACCATGGCACGTCTCGGTA-TTATTTC 127
consensus_11134#6 GAAGCTNNTCACGCACTTCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTA-TTATTTC 117
consensus_11134#7 GAGC---CTTGCTCACNTCT--ATCGCTTGTACTCTTTGGCACGTCTCGGTA-TTATTTC 128
consensus_11134#2 CAATCTAGTTCCGTCATACGTCTACA---GTGTTTTGTGGTCCGGACCACTACGAACGCA 362
* *
consensus_11134#3 GTTTACCCCGAGCCCCCGTTCATCACAATATCAT-------------------------- 366
consensus_11134#4 GTTTACCCCGAC------------------------------------------------ 194
consensus_11134#0 GTTTACCCCGAGCCTACGCCTTCGACCATCGCTGTTCTGGTATCGTCGACTTCAGTAAAT 527
consensus_11134#1 GA-TACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTA 426
consensus_11134#5 GA-TACCACGAGATCGCCAATAAATATACT------------------------------ 156
consensus_11134#6 GAATACCACGAGATCGCCAATAAATATACTTG---------------------------- 149
consensus_11134#7 GA-TACCACA-------------------------------------------------- 137
consensus_11134#2 ATCCAGTGCTATGCCTCCACCAATGATGGCAATGAAGACGATAAAGATCAGTTCTACGAG 422
* *
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 TTTGGCGAAAGCTGGCCTGATCACCCACGCTCTAGTCAACGCACTCAGTCGACCTCTCTG 587
consensus_11134#1 CGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACGTAATCGAATAGTAGTGGTGATCAT 486
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 AGGCTGCAGTCGATCGCAGAGAAGTGCCTAAGAAAAGGATCTAACCATCCTGATAGGTGA 482
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 GCTCCAAATACGTATGGTATACATTTGGTCCCGAACATGGNTATTCTGGTCGCATCTGGT 647
consensus_11134#1 AGTCCGTCCACGACTCGACATCCACTAGAGTCTACATACGCTGAGCTGATTTTTCGAACA 546
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 CCTAAGCACCAGAGTCGTGATGGACAACACTGGGTACAAAAATCATGGGACGATATGGGC 542
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 TCCTTGGCTCAATCTGGGTTCGTCCTACATCTGCGGCGTTTCTGGTCCGGACCTCTACGA 707
consensus_11134#1 CGTTTCAACCTCTGGACAACCTCCCAGAGAACATTACTACGACAGGACTCAGTTTGCAAA 606
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 TGGGTGAAATGAATGAGAATGGTGAGGGATTCGCAAATTTACGTGC-------------- 588
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 ACGCAACTTTCAGATTCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATC 767
consensus_11134#1 TATATGTATCGAAGATGATACAGATAGCTTATTCATGATTGAAAACTGATTGGAAAACTC 666
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 AATACGGCACGTTCCTTCTGGTACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGG 827
consensus_11134#1 TGTTCTGTATGTTGTCAAGTTCTACTAAACATCAGGGAGAAAATTGGAAGGCATATTCAG 726
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 ATCAACGATCACTTCCTGTTCTGCCAACGCCTTCGTCCTACAATTGCACGTTTCGCGATC 887
consensus_11134#1 ATTTTCGTTTTATTTCTACATCCAATTATACACCATAATATCGAGTTACTGAGTTTAACA 786
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 AGTCCCACGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCC 947
consensus_11134#1 ACCTCACTGTGTTGCTGTAATGCGACAATCAGGACTATTGCATCACATTACTAACCTGTC 846
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 TGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTA 1007
consensus_11134#1 AAAAGGTTCCCTACCTTCTCGTATTTTACAGATTTTTTCCGCATCACACCCAAGGTGGAT 906
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 TTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACT 1067
consensus_11134#1 GGGTTTTGTGCCAATGATGAACCCCTTAAAGTGTGAACTGAATGGTCTGTTTTTAAAATA 966
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 TCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTG 1127
consensus_11134#1 TTCCTTGTAAAGTCTTTTTATGTCATATTATATAT------------------------- 1001
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 ------------------------------------------------------------
consensus_11134#4 ------------------------------------------------------------
consensus_11134#0 TACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTG 1187
consensus_11134#1 ------------------------------------------------------------
consensus_11134#5 ------------------------------------------------------------
consensus_11134#6 ------------------------------------------------------------
consensus_11134#7 ------------------------------------------------------------
consensus_11134#2 ------------------------------------------------------------
consensus_11134#3 --------------------------------------------------------
consensus_11134#4 --------------------------------------------------------
consensus_11134#0 ATCTGGACTAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACC 1243
consensus_11134#1 --------------------------------------------------------
consensus_11134#5 --------------------------------------------------------
consensus_11134#6 --------------------------------------------------------
consensus_11134#7 --------------------------------------------------------
consensus_11134#2 --------------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||