These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11138#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 30 consensus length = 1075 fasta sequence [ACTTCTGAGCTCACCATACACCAACCAGTCTATTTTTTGCCTACATCTACCAGTGTTCTGTTACCGCCGTCCAGAATGTCTTCGACATTTACTGTTGGAAAAACATCTCTTAACGATTGACCTCAATATGAAGAGTAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATTCTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTATATCCCAATAAAAATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAAAGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAATCGCATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGTGAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCGTACTTTTGGAACACAACAAATTGTGGACACCCATCATATTATCACGATATCTTTTGTCAAACCGTCTTCTGACTTCATTGGGAGTGACTGGACAGTAACAATTTCGTCAGGTGCGCGGAATCGTACTTCTATGGAATATCCATTGTCGGTGATTGTCTACTCTTATTATCCTGGTGATAAAAATGACTTCTTCATCGAACCAGTCATTTCGAATAAGAAAATTACAGGATTACAAGGTTGTTCAATGGGATCGAGTGATTTTCATATTTGAT] [+] EMBL CD128907 [ACTTCTGAGCTCACCATACACCAACCAGTCTATTTTTTGCCTACATCTACCAGTGTTCTGTTACCGCCGTCCAGAATGTCTTCGACATTTACTGTTGGAAAAACATCTCTTAACGATTGACCTCAATATGAAGAGTAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATTCTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTATATCCCAATAAAAATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAAAGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAATCGCATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGTGAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCT ] [+] EMBL CD162813 [ TAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATTCTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTATATCCCAATAAAGATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAAAGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAATCACATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGTGAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATC ] [+] EMBL CD059490 [ GCGGTCATCCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTCTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ] [+] EMBL CD059497 [ CGGCCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGGTCTAAGCTAC ] [+] EMBL CD059606 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGACCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACTACTGG ] [+] EMBL CD059493 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGG ] [+] EMBL CD059611 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ] [+] EMBL CD059495 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ] [+] EMBL CD059408 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ] [+] EMBL CD059584 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ] [+] EMBL CD059626 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAA TTATTTTGG ATGAAACATAGAAGCCCC ACTCTCTTTTGTT GGGTTATGTGGAC ATCCAAGATCCAGAAAA TTTGCCTACCGCC CTCATGTGATC ATTTGATGGGGTTCTAAGCTAC ] [+] EMBL CD059614 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAAAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGAC ] [+] EMBL CD059602 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGGCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGA ] [-] EMBL CD059554 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTT ] [-] EMBL CD059485 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAAC ] [-] EMBL CD059585 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACA ] [-] EMBL CD059362 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ] [-] EMBL CD059479 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ] [-] EMBL CD059430 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTATAAGCTACA ] [-] EMBL CD059568 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTTTAAGCTACA ] [-] EMBL CD059570 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ] [-] EMBL CD059618 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ] [-] EMBL CD059617 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ] [-] EMBL CD059624 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAAT ] [-] EMBL CD059338 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGCAGCATAGAAGCCCCAACTCTCTTTTGTTTGGGGTCATGTGGACAATCC ] [-] EMBL CD059601 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ] [-] EMBL CD059571 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ] [-] EMBL CD059326 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATG ] [-] EMBL CD059527 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTGATTACTCCACTTCATCTACGTAAAGTAATATC ] [+] EMBL AI977488 [ AAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGCAACACGATGGTCGTACTTTTGGAACACAACAAATTGTGGACACCCATCATATTATCACGATATCTTTTGTCAAACCGTCTTCTGACTTCATTGGGAGTGACTGGACAGTAACAATTTCGTCAGGTGCGCGGAATCGTACTTCTATGGAATATCCATTGTCGGTGATTGTCTACTCTTATTATCCTGGTGATAAAAATGACTTCTTCATCGAACCAGTCATTTCGAATAAGAAAATTACAGGATTACAAGGTTGTTCAATGGGATCGAGTGATTTTCATATTTGAT] consensusID : consensus_11138#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 388 fasta sequence [GCTTACAGGGTTTCTCTCTCTCCACTACTTTCTCTCTACCTATCAAAGGGGTTCACTGTGAACGTGTGATACAGAGCGGAGAATCTCAAATTATGGGGAGATGCTGTGCCCTGTGTAGAAGAGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAGAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC] [+] EMBL CD059573 [GCTTACAGGGTTTCTCTCTCTCCACTACTTTCTCTCTACCTATCAAAGGGGTTCACTGTGAACGTGTGATACAGAGCGGAGAATCTCAAATTATGGGGAGATGCTGTGCCCTGTGTAGAAGAGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAGAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC] consensusID : consensus_11138#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 341 fasta sequence [CGGTCATTCCTAACAGATTTCCACATTGTAA-ACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAATTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC] [+] EMBL CD059524 [CGGTCATTCCTAACAGATTTCCACATTGTAA ACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAATTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC] [-] EMBL CD059502 [CGGTCATTCCTAACAGATTTCCACATTGTAAGACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATCTGGGGATCTTAATTTTTTTGGTG ] [-] EMBL CD059518 [ GGTCATTCCTAACAGATTTCCGCATCGTAA ACAAAGTCCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGAAGCTTGCCTTTCGTCAAGTGATGGTATGGAATCAGGCAAga ] [-] EMBL CD059488 [ CAACTCTCTTTTNGTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11138#0 ACTTCTGAGCTCACCATACACCAACCAGTCTATTTTTTGCCTACATCTACCAGTGTTCTG 60 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 TTACCGCCGTCCAGAATGTCTTCGACATTTACTGTTGGAAAAACATCTCTTAACGATTGA 120 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 CCTCAATATGAAGAGTAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATT 180 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 CTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTAT 240 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 ATCCCAATAAAAATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAA 300 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 AGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAAT 360 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 CGCATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGT 420 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ----------------------------------------------------------GC 2 consensus_11138#0 GAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTA 480 consensus_11138#2 ---CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTA 57 consensus_11138#1 TTACAGG-GTTTCTCTCTCTCCACTACTTTCTCT-CTACCTATCAAAGGGGTTCACTGTG 60 * * ** ** * * ** ** * * * * ***** ** *** * * consensus_11138#0 ----TCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCT-TGCCTTTCGTC-AA 534 consensus_11138#2 ----TCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCT-TGCCTTTCGTC-AA 111 consensus_11138#1 AACGTGTGATACAGAGCGGAGAATCTCAAATTATGGGGAGATGCTGTGCCCTGTGTAGAA 120 * * * * * * * **** ** ** * ** ****** **** * ** ** consensus_11138#0 GTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATA 594 consensus_11138#2 GTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAA------ 165 consensus_11138#1 GAGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATA 180 * **************************************************** consensus_11138#0 TCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGA 654 consensus_11138#2 --------------------------------TTTGTTTTGGGGAAGTTATCGTCCTGGA 193 consensus_11138#1 TCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGA 240 **************************** consensus_11138#0 ATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACA 714 consensus_11138#2 ATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACA 253 consensus_11138#1 ATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACA 300 ************************************************************ consensus_11138#0 ATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTA 774 consensus_11138#2 ATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTA 313 consensus_11138#1 ATCCAAGATCCAGAGAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTA 360 ************** ********************************************* consensus_11138#0 AGCTACAACTGGTTGGAACACGATGGTCGTACTTTTGGAACACAACAAATTGTGGACACC 834 consensus_11138#2 AGCTACAACTGGTTGGAACACGATGGTC-------------------------------- 341 consensus_11138#1 AGCTACAACTGGTTGGAACACGATGGTC-------------------------------- 388 **************************** consensus_11138#0 CATCATATTATCACGATATCTTTTGTCAAACCGTCTTCTGACTTCATTGGGAGTGACTGG 894 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 ACAGTAACAATTTCGTCAGGTGCGCGGAATCGTACTTCTATGGAATATCCATTGTCGGTG 954 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 ATTGTCTACTCTTATTATCCTGGTGATAAAAATGACTTCTTCATCGAACCAGTCATTTCG 1014 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 AATAAGAAAATTACAGGATTACAAGGTTGTTCAATGGGATCGAGTGATTTTCATATTTGA 1074 consensus_11138#2 ------------------------------------------------------------ consensus_11138#1 ------------------------------------------------------------ consensus_11138#0 T 1075 consensus_11138#2 - consensus_11138#1 - |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||