These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11160#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 789 fasta sequence [CCGAGCGGCCGCGACAAGTTTTTTTTTTTTTTTTTNTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTNNNNNGTTTTTCCGGGGTTAGCTAAATTTTATTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTA-CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT-CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG-CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT-AATGGCTTTTACTTTTATGCCTT-GAGGCACATT-CACAGTTTCAGACGACT-TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCAACAACCGCCACAATTATCCAGGTCGG] [-] EMBL CD149060 [CCGAGCGGCCGCGACAAGTTTTTTTTTTTTTTTTTNTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTNNNNNGTTTTTCCGGGGTTAGCTAAATTTTATTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATATCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTA CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTT ] [+] EMBL CD076529 [ GCTAAATTTTATTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTA CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAgg ] [-] EMBL AI976869 [ CTAAATTTTATTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTA CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAA ] [+] EMBL CD132715 [ AATTTTATTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTA CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTANACCACTCTTTTAAATGGC TTTACTTTTATGCCTTNGA GCACATT CACAGTTTCAGACGACTNNTAT ATCT ] [-] EMBL CD133107 [ ACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTA CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCAC ] [-] EMBL CD142069 [ TCAATNTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTA CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCAACAACCGCCA ] [-] EMBL CD132014 [ TTTA CACGTGATTCCATAGGT CAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAAC TGGAACGGTCGTTGGTGGGAATCATGTTGATGGGAAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGAAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGAACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT AAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCAACAACAGCCA ] [-] EMBL SM506 [ cnTTTACCACCTGATTCCATAGGNACCATCTTGGTCGCTTTTTCCCCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGNCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATTNCACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGA ] [+] EMBL CD186508 [ TTA CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCACAAAT ] [+] EMBL CD161328 [ CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCAACAACCGCC ] [+] EMBL CD138216 [ TGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCT GAACTTGGAACCGTCGTTGGCTGGAATCAAGTTGCGAGGGAAGTGGGCATAAACGGACTTTAATAAATAACGATACCCAGATGTAACACCTCCTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAAACAAGAATGAAGGTACCAAATACCGGATATCGCAAA ] [+] EMBL CD138156 [ TGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACANATAAGGGATATCGCAA ] [+] EMBL CD138127 [ TGATTCCTTAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCANATTGTATTCCGTCTCAcc ] [+] EMBL CD138144 [ TGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAA ] [+] EMBL CD138186 [ TGATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGACGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGAC ] [-] EMBL CD138112 [ GATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACCTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAA ] [-] EMBL CD138086 [ GATTCCATAGGTACAATCTTGGTCGCTTTTT CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACCTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTATAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAA ] [+] EMBL CD147953 [ CTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAA ] [-] EMBL CD186426 [ ATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTG CCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCAACAACCGCC ] [-] EMBL CD132025 [ TTTGATGTNTAGGGACAAATGACNGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTT AATGGCTTTTACTTTTATGCCTT GAGGCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCAACAACCGCCA ] [-] EMBL CD149879 [ GCACATT CACAGTTTCAGACGACT TTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAGCAAATAAGGGATATCGCAAATGGTATTCCGTATCAAACACACGCACCGCAATTGCAACACCCGCCA ] [-] EMBL CD157525 [ AATTTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTATCAAACACACGCGCCGCAACTGCAACAACCGCCACAATTATCCAGGTCGG] consensusID : consensus_11160#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 740 fasta sequence [ACGCATACGGTATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGGGGTTAGCTAAATTTTATTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCACCTCGTGCCGAATTC] [+] EMBL BF936396 [ACGCATACGGTATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGGGGTTAGCTAAATTTTATTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATCTCATCTTTCACTCCAGTGGCTGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCCCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTT ] [+] EMBL CD074192 [ GCTAAATTTTATTTATTTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCANATCGTATTCCGTC ] [-] EMBL CD080274 [ CTAATTTATTTTCAATTAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCTTGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATATCATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCACCTCGTGCCGAATTC] [-] EMBL CD139952 [ CCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACC ] [-] EMBL CD124159 [ TGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTGACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGCCGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAA ] [+] EMBL CD124144 [ tTGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAn ] [+] EMBL CD124076 [ tTGAGACTTTTACACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTATACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAn ] [+] EMBL CD161310 [ CACCTGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAAC TTGTAACAACGATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAGCCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTACTCCGTCTCAAACACACGCGCC ] [+] EMBL CD138243 [ TGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACANATAAGGGATATCGCAA ] [+] EMBL CD124073 [ TGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCCGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTTTGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGTAAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAn ] [+] EMBL CD138170 [ TGATTCCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAACCGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAACGATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAGCAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACA ] [-] EMBL BG932323 [ TGACCGAGTTCACGTTTCAGTGATCCACGAGGACTTTTGACGTAAACCACTCTTTTAATGGTTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTCAAACACACGCGCCGC ] [-] EMBL CD138158 [ AAACCACTCTTTTAATGGCTTTTAGTTTTATGCCATGAGGCACATTCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAA ] [-] EMBL CD136370 [ CTTTTATGCCTTGAGGCACATCCACAGTTTCAGACGACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATATCGCAAATCGTATTCCGTCTC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11160#0 CCGAGCGGCCGCGACAAGTTTTTTTTTTTTTTTTTNTTAATTTTTTTTTTTTTTTTTTTT 60 consensus_11160#1 --------------------------------------ACGCATACGGTATGCAGCTGCA 22 * * * * * consensus_11160#0 TTTTTTTTTTTTTTTTTTTTNNTNNNNNGTTTTTCCGGGGTTAGCTAAATTTTATTCAAT 120 consensus_11160#1 TGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGGGGTTAGCTAAATTTTATTCAAT 82 * * ************* * ******************************* consensus_11160#0 TAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCT 180 consensus_11160#1 TAGCTTCAATAGATTCTTTACTGGATACATATATACCATCAAGAAATTTACGGATATCCT 142 ************************************************************ consensus_11160#0 TGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATAT 240 consensus_11160#1 TGTGTCGAACCCTGCAGGACTGTTGAACAAGGGCAGCACATTTTGCGACCTTTTCAATAT 202 ************************************************************ consensus_11160#0 CATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTACACCTGATT 300 consensus_11160#1 CATTGCCCTCAATTTGAATTTCATCTTTCACTCCAGTGGCTGAGACTTTTACACCTGATT 262 ************************************************************ consensus_11160#0 CCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAAC 360 consensus_11160#1 CCATAGGTACAATCTTGGTCGCTTTTTCTCCTAAAAAGTTGCGGATCTCCAACTTGGAAC 322 ************************************************************ consensus_11160#0 CGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAAC 420 consensus_11160#1 CGTCGTTGGCTGGAATCATGTTGATGGGGAAGTGGGCATAAACGGACTTTAATTTATAAC 382 ************************************************************ consensus_11160#0 GATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAG 480 consensus_11160#1 GATACCCAGATGTAACACCTTTTATCATATTTCCAATATGGGAGCAGACTGTCCGGACAG 442 ************************************************************ consensus_11160#0 CAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGAAAACTT 540 consensus_11160#1 CAGCTAGCTCCTTTCTGTTGCCAAAAAACTTTGTAACAACAATCCTTTTCGAGGAAACTT 502 ***************************************************** ****** consensus_11160#0 TGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGT 600 consensus_11160#1 TGATGTCTAGGGACAAATGACCGAAGTCACGTTTCAGTGATCCACGAGGACCTTTGACGT 562 ************************************************************ consensus_11160#0 AAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACG 660 consensus_11160#1 AAACCACTCTTTTAATGGCTTTTACTTTTATGCCTTGAGGCACATTCACAGTTTCAGACG 622 ************************************************************ consensus_11160#0 ACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATA 720 consensus_11160#1 ACTTTATAATCTTCATTATGTGTAAAGGCAGAAAAGAATGAAGGTAACAAATAAGGGATA 682 ************************************************************ consensus_11160#0 TCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCAACAACCGCCACAATTAT 780 consensus_11160#1 TCGCAAATCGTATTCCGTCTCAAACACACGCGCCGCAACTGCACCTCGTGCCGAATTC-- 740 ******************************************* * *** * * consensus_11160#0 CCAGGTCGG 789 consensus_11160#1 --------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||