These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11169#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 1751 fasta sequence [CATCTGAAGAAGGTTTGATTTGTTCAAATAACAGTGTCAGAATGTTTTGGGTGTTTCTCCCTCCAAATTCTAAAAGTTACCCTGAAATTAGTCTGCATCACTGTTATAACGTATAGATTTCTGGCCTCTTAATATATATGTATATGTCCAATGATACAGGAAATACGTACGAGCAGTCTTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAACACAAATAACAGCCTCGGCAATATGAATCATTATTTACAAGCATACTGGGTTATATATACTAACCAAACAGA-CCACATATACC-AAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCTGTAGCTAGGGGGAAAGT-ATCAATAATAATAG-TCCAAGGTCAAAATAAAGGTTGTGATAAGAGGAACACGGAAACGATTAGGTCACTTATTTAACAA-CTATCCAATA-GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT-ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA-TAGCCAAGTTACTATTAATGCGATATG-TTTGTCACA-TTTAACAGGGAATGCATTAG-AACTGA-AGAGAT-CATGAGGATCGACGACATTTGATTCGAGGTCA-CCAACATTTGATTCTTCTGAAATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA-TTCTTGA-TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCA--TTTTTTT--ATGCA---AATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCGAAATGACGTCAGCGGCTGCTGTATTTTTTTTTTCCAGAATCCCATCCCCGTCGCCAATTGTTATAACGTATGAATTTCTGGCCTGAACAGTATTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAA] [-] EMBL AI977260 [CATCTGAAGAAGGTTTGATTTGTTCAAATAACAGTGTCAGAATGTTTTGGGTGTTTCTCCCTCCAAATTCTAAAAGTTACCCTGAAATTAGTCTGCATCACTGTTATAACGTATAGATTTCTGGCCTCTTAATATATATGTATATGTCCAATGATACAGGAAATACGTACGAGCAGTCTTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAACACAAATAACAGCCTCGGCAATATGAATCATTATTTACAAGCATACTGGGTTATATATACTAACCAAACAGA CCACATATACC AAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCTGTAGCTAGGGGGAAAGTAATCAATAATAATAGTTCCAAGGTCAAAATAAAGG ] [-] EMBL CD185823 [ AATCATTATTCACAAGCACACTGGGTTATATATACTAACCAAACAGACCCAATTATACCAAAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCTGTAGCTAGGGGGAAAGTAATCAATAATAATAGTTCCAAGGTCAAAACAAAGGTTGTGATAAGAGGAACACGGAAACGATTAGGTCACTTATTTAACAA CTATCCAATAGGGAATGGGCATATTGTATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACTATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGACTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGAGTTGAT GTCCGTATTTTTAATTTCCTCGAAT ] [+] EMBL CD126221 [ GGGAAAGT ATCAATAATAATAG TCCAAGGTCAAAATAAAGGTTATGATAAGAGGAACACAGAAACGATTAGGTCACTTATTTAACAAGCTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACTTCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGAGATACAACAGCTCCCCTTTTTGAGAAATCCGGGGTTGATGATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCGCACTAAAGACTGTTGGATCCTCATA TAGCCGAGTTACTATTAATGCGATACG TTTGTCACATTTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCACCCAACATTTGATTCTTCTGAAATAGTTTCTTTGAATT ] [+] EMBL CD139626 [ AAAGGTTGTGATAAGAGGAACACGGAAACGATTAGGTCACTTATTTAACAA CTATCCAATAGGGAATGGGCATATTGTATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACTATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGACTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGAGATGAT GTCCGTATTTTTAATTTCCTCGAATTCACCCTCGCTCACGAAAGACTGTTGGATCCTCATA TAGCCAGGTTACTATTAATGCGATATG TTTGTCACC TTTAACAGGGAATGCATCAGAAACTGAGAGA AT CATGA GATCGACGA ] [-] EMBL CD145817 [ TGATAAGAGGAACACGGAAACGACTAGGTCACTTATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTC ] [+] EMBL CD151951 [ TTATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCGGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATANTAGCC AGTTACTATTAATGCGATATGTTTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGTAATAGTTTCTTTG ] [-] EMBL CD151902 [ TATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTCTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA TAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGTAATAGTTTCTTTGA ] [-] EMBL CD151958 [ TATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA TAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGAAATAGTTTCTTTGA ] [-] EMBL CD141673 [ an CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA TAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGGCGACATTTGATTCGAGGTCA CCAACATTTGATTC ] [-] EMBL CD147584 [ GGACCTCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGAGTTGAT ATCCGGATTTTAAA TTTCTCGAATTCACCCTCCCCCACGAAAGACTGTTGGATCCTTATA TAGCCAAGTTACTATTAATGCGATATG TTCGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGATTCGACGACATTTGATTCGAGGTCA CCA ] [+] EMBL CD144430 [ AGACTGTTGGATCCTCATA CAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGATCCATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATCTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAG ] [-] EMBL CD118319 [ TGTTGGATCCTCATA CAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCAACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCCCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCT ] [-] EMBL CD167586 [ GAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCA TAGATTCATTAGAAACATTTTTCGTATCATGATTAAT ] [-] EMBL AW017138 [ TGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGAAATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAAATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGCTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCG ] [+] EMBL CD069712 [ ACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA CTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGGAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTCCGTATCATGATTAAATTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTCCCGTTTCTTCGTGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACTTTTTGTTTCAGGGTTA ] [-] EMBL CD137805 [ TAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAG TGTATTGGATTTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGCTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCGAAGCATGGGTGATTCAGCAGCTTCGCGTGT ] [-] EMBL CD139601 [ tcTGATTTATCATTNAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGGAACATATGAATCAGCGAAATAATCGGGATCTGGCAGAACAATTAGATAATCTTGATCATTAGATTCATTAGAAACATTTTCCGTATCATGATTAAATTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGTTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTTGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAg ] [-] EMBL CD139655 [ GAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTGATGGCGCTTAGTAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGCACTGGGCTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGTCGG ] [-] EMBL AI975631 [ ATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCAAGTATCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCGTGCATAACTGCTGCATTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCGAAGCATGGGTGATTCAGCAGCTT ] [+] EMBL CD180071 [ GATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGTATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCACCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGTAATTAATGCGTCAACTTCCGTTGCACCCNCGAAGCATGGGTGATTCAGCAG ] [-] EMBL CD142708 [ ATTGCTCGCAC TTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAGTTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTTCACTCCCAAAGCAAGGGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAA ] [+] EMBL CD200817 [ CTCACACGTTTTGTTTCAGGGTTAATAAAACTTGAACCGTGTACAGGGCGTGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAGTTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAATTGGAAATCAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCT ] [-] EMBL CD170317 [ ACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAGTTATTGCTTTGTATGGATTCACTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAATTGGAAACCAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGT ] [-] EMBL CD132449 [ CTGGAACAGGTAGTACTGGGTTACTGGACTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGAGTCATTGAGGCTTTCGCCGGCATATTCAATAGTTCTGTAATTGTTTTCCAGCTCTGTACGCAATTTTGAAATTATTGAGTCAACTTCCGTTTCACTCCCAAAGCATGGGTGATTCAGCAGCTTCGCGTGTAATTTGTCAATGAAATCCAATTGACTCTTTCTGAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGGTCGGAAGTTAAGGCCA TTTTTTTAAATGTA AATAATAATAATAAATCCAAAAAA ] [+] EMBL CD117322 [ GATCGTGCATAACTGCTGCATTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTT ] [-] EMBL CD161037 [ ACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAATTGGAAATCAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCA TTTTTTT ATGCA AATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCGAAATGACGTCAGCGGCTGCTGTATTT ] [-] EMBL CD181506 [ CTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTCCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCGAAGCATGGGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCCAAAGCGCTGCTCTTGTCGCTGGATTAG ] [-] EMBL CD181275 [ CTGCTGCGCTTAAGTANTTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAAATGGAAATCAATGCGTCAACTTCCGGTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCATTTTTTTTT ATGCAAATAATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCC ] [-] EMBL CD184108 [ AAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCA TTTTTTT ATGCA AATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCAAAATGACGTCAGCGGCTGCTGTATTTTTTTTTTCCAGAATCCCATCCCCGTCGCCAATTGTTATAACGTATGAATTTCTGGCCTGAACAGTATTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAA] consensusID : consensus_11169#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 814 fasta sequence [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATCGTAACTGTATAAATATGCCCTGTCTGTAAACCATTTTTGTTCTGCTGCTGACCCCATAAACAATTATTATTTAACGGCTGTGTTCTGATTTATTGGAGTTGGGGAACAGTATTGGGGTAGAGCTAGGATATGTGAATTTGGTCTATCGGTAGAATTGTGAGTAGTCGTGTGGCAATACCCTCCCGATATATATTGGCTTTATAACAATGTGGCTACGGAGATTTTGCTGACAAGGTGTATACTAGGTAGGATCCGGTT] [+] EMBL CD145247 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATCGTAACTGTATAAATATGCCCTGTCT ] [+] EMBL CD145349 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGT ] [+] EMBL CD145363 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTNTCATGTGTCGTTTCCCTATTGGTCAATTNTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATC ] [+] EMBL CD145332 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTAT ACCTTCACGTGTCCTTCCTTTCCATTGGGTACTGTTAATAGTCAT ] [+] EMBL CD146531 [ TTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTT ] [-] EMBL CD145164 [ CACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTANAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATCGTAACTGTATAAATATGCCTTGTCTGTAAACCATTTTTGTTCTGCTGCTGACCCCATAAACAATTATTATTTAACGGCTGTGTTCTGATTTATTGGAGTTGGGGAACAGTATTGGGGTAGAGCTAGGATATGTGAATTTGGTCTATCGGTAGAATTGTGAGTAGTCGTGTGGCAATACCCTCCCGATATATATTGGCTTTATAACAATGTGGCTACGGAGATTTTGCTGACAAGGTGTATACTAGGTAGGATCCGGTT] [+] EMBL CD145182 [ cCTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTA ] [+] EMBL CD145205 [ ntannccCTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11169#0 CATCTGAAGAAGGTTTGATTTGTTCAAATAACAGTGTCAGAATGTTTTGGGTGTTTCTCC 60 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 CTCCAAATTCTAAAAGTTACCCTGAAATTAGTCTGCATCACTGTTATAACGTATAGATTT 120 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 CTGGCCTCTTAATATATATGTATATGTCCAATGATACAGGAAATACGTACGAGCAGTCTT 180 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 GGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAACACAAATA 240 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 ACAGCCTCGGCAATATGAATCATTATTTACAAGCATACTGGGTTATATATACTAACCAAA 300 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 CAGACCACATATACCAAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCT 360 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 GTAGCTAGGGGGAAAGTATCAATAATAATAGTCCAAGGTCAAAATAAAGGTTGTGATAAG 420 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 AGGAACACGGAAACGATTAGGTCACTTATTTAACAACTATCCAATAGGAATAGGCATATT 480 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 ATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGA 540 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 ATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGG 600 consensus_11169#1 -----------------------------------------TCCTGTGGGACTCCTCAGT 19 * * * ** *** consensus_11169#0 GGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGATATCCGGATTTTAAATTTTCT 660 consensus_11169#1 GG-CAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGG----AACTTTTTA 74 ** * * * *** * * * ** * ** **** * ** **** consensus_11169#0 CGGATTCACCCTCCCCCACGAAAGA-CTGTTG----GATCCTCATATAGCCAAGTTACTA 715 consensus_11169#1 CGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGA-A 133 ** * ** * * * * **** * * * * * * * ** * consensus_11169#0 TTAATGCGATATGTTTGTCACATTTAACAGGGAATGCATTAGAACTGAAGAGATCATGAG 775 consensus_11169#1 TAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGG-----TAAG 188 * *** * ***** * ** * * *** ** * * * *** * ** consensus_11169#0 GATCGACGACATTTGATTCGAGGTCACCAACATTTGATTCTTCTGAAATAGTTTCCTTGA 835 consensus_11169#1 CCCTAAC----TTGGAATCCTGGAGGGAAACAGTAAA-------GAAAAAGGCC-----A 232 ** ** ** ** ** **** * * **** ** * consensus_11169#0 ATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTA-TGAGA 894 consensus_11169#1 AAGTACACACTAAGTCGGGAATGGGAAACAGA-CATCGAAAGAATCAATAACCACTGGAA 291 * * * * * ** * * * ** * *** * ***** ** * * ** * consensus_11169#0 GTTGTATTGGATTCTTGATTATCATT--TAATACATCTGACATTTTTCTCTCATTTTTAT 952 consensus_11169#1 AGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCAC 351 * * * * ** * *** *** * ** * * ** ** * consensus_11169#0 AAGAGAATTCAACAGAAACATATGAATCATCAAA----ATAATCTAAATCTGGTAGAACA 1008 consensus_11169#1 AAGAATATCCCA-AAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATA 410 **** ** * * * ** ** * * * *** ** * * * ** * * * consensus_11169#0 ATT-ACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTC 1067 consensus_11169#1 ATTCGCATGTTGTTTCCTATTGG--CCATTATTTACAGTGTCCTAACTATGACT---TTC 465 *** ** * ** *** * ***** *** * * * * **** * *** consensus_11169#0 ATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGG 1127 consensus_11169#1 ATGTGTCGTTTCCCTATT-GGTCAATT--TTGAGTCGTCCTA-ATTATAACCTTCACGTG 521 ** ** ** ** **** * * * * ** * ** * ** * * ** * consensus_11169#0 TACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTC 1187 consensus_11169#1 TCCTTCCTTTCCATTGGTTACTGTTAATA-GTCATCGTAACTGTATAAATATGCC--CTG 578 * ** * ** * * ****** * ** ** ** * * ** * * * consensus_11169#0 ATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTC 1247 consensus_11169#1 TCTGTAAACCATTTTTGTTCTGCTGCTGACC---------CCATAAACA----ATTATTA 625 ** * ******* * * * ** * *** ** * consensus_11169#0 TGAAACAGGTA-GTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTAT 1306 consensus_11169#1 TTTAACGGCTGTGTTCTGATTTATTGGA---GTTGGGGAACAGTATTGGGGTAGAGCTA- 681 * *** * * ** *** *** *** * * * * * ** * * * ** consensus_11169#0 TGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTT 1366 consensus_11169#1 ------GGATATGTGAATTTGGTCTATCGGTAGAATTGTGAGTAGTCGTGTGGCAATACC 735 * ** * *** * ** *** * ** * * **** *** * consensus_11169#0 CCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCAAAGCATG 1426 consensus_11169#1 CTCCCGATATATATTGGCTTTATAACAATGTGGCTACGGAGATTTTGCTGACAAGGTGTA 795 * * * ** ** * * **** * * ** ** * *** * * consensus_11169#0 GGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGC 1486 consensus_11169#1 T---ACTAGGTAGGATCCGGTT-------------------------------------- 814 * * * ** ** ** consensus_11169#0 GCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCATTTTTTTAT 1546 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 GCAAATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCGA 1606 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 AATGACGTCAGCGGCTGCTGTATTTTTTTTTTCCAGAATCCCATCCCCGTCGCCAATTGT 1666 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 TATAACGTATGAATTTCTGGCCTGAACAGTATTGGGTGCTATTCGGTCCTTCCTATCTGC 1726 consensus_11169#1 ------------------------------------------------------------ consensus_11169#0 CTAGCCCAGTCCGTTAAGTCCAGAA 1751 consensus_11169#1 ------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||