These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11179#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 513 fasta sequence [CAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAA-CTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGGCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATG] [+] EMBL CD086073 [CAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAA CTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGCCCGAAAAGAGGGTTGACTTGAGTCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD134278 [ ACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAAGCTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGGCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATG] [+] EMBL CD134277 [ ACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAA CTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATGGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATG] consensusID : consensus_11179#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 30 consensus length = 505 fasta sequence [ACAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG-AAATGCTT-CTAGTGGGGTATG-ACG-AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG-AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA-CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCAAAAGACC] [+] EMBL CD086209 [ACAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD086227 [ GTAATACAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGTAAATGCTT CTAGTGGGGTATG ACGCAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCATTATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGA ] [+] EMBL CD096038 [ TAATACAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGCGGGGTATG ACG AGAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD086254 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATGAACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095797 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095820 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095832 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095836 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095879 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095910 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095923 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095933 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095981 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD096060 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095844 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTCGCAGGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD096007 [ ATAGAAACTTCTCTTAGTCTGCATAAAAGTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAAGTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTCAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095777 [ ATAGAAACTTCTC TAGTCTGCATAAAATTTGCGAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACGAAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGCTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095825 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGAGGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095839 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGACTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095966 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGACGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095979 [ ATAGAAACTTCTCTTAGTCTGCACAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095858 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGCTTGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [-] EMBL CD095664 [ TAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGAC ] [+] EMBL CD188680 [ TGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAGCAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCAAAAGACC] [-] EMBL SMAA18517 [ AAGTTTTACACGG AAATGCTTACTAGTGGGGTATG ACG AAAAATTAATCATTAACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGGTGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGA ] [+] EMBL CD144363 [ GTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGA ] [+] EMBL CD095852 [ AATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD095932 [ CATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ] [+] EMBL CD134651 [ CAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAGGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAGTACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCA ] [+] EMBL CD197959 [ aaTTAAGGGAGCTATANTTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCACCCAAAAGAGGTAGCAAAATACTGAACAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACGAGCAGCCA ] consensusID : consensus_11179#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 369 fasta sequence [ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGG-AATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA] [+] EMBL CD095994 [ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGGCAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA] [+] EMBL CD096026 [ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGG AATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA] [+] EMBL CD095776 [ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGG AATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA] [+] EMBL CD086295 [ TATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA] [+] EMBL CD095808 [ TGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11179#1 ACAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTAC 60 consensus_11179#2 ------------------ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTAC 42 consensus_11179#0 -CAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTAC 59 ****************************************** consensus_11179#1 ACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAG 120 consensus_11179#2 ACGGAAATGCTT---------------------------------ATTGATGATTATGAG 69 consensus_11179#0 ACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAG 119 ************ *************** consensus_11179#1 AGGAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCAT 180 consensus_11179#2 AGGAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCAT 129 consensus_11179#0 AGGAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCAT 179 ************************************************************ consensus_11179#1 TAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAAT 240 consensus_11179#2 TAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAAT 189 consensus_11179#0 TAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAAT 239 ************************************************************ consensus_11179#1 TTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCA 300 consensus_11179#2 TTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCA 249 consensus_11179#0 TTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCA 299 ************************************************************ consensus_11179#1 ATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGC 360 consensus_11179#2 ATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGC 309 consensus_11179#0 ATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGC 359 ************************************************************ consensus_11179#1 AAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAAC---------------------- 398 consensus_11179#2 AAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAAC---------------------- 347 consensus_11179#0 AAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTT 419 ************************************** consensus_11179#1 ---------------GGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCA 443 consensus_11179#2 ---------------GGTCTGTTAGGACCTTTGGGGA----------------------- 369 consensus_11179#0 CAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGGCA 479 ********************** consensus_11179#1 ACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCAAAAGA 503 consensus_11179#2 ------------------------------------------------------------ consensus_11179#0 ACAAGCAGCCAGAAAACAGTCATTACTGTTAATG-------------------------- 513 consensus_11179#1 CC 505 consensus_11179#2 -- consensus_11179#0 -- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||