These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11180#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 36 consensus length = 1577 fasta sequence [AGCTTGGCGCCGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC--TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG-AGTTTGGGGGTA-CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT-GGGGGGAAAGTTGGTGCA-CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC-TCAAC-TGATCACAGCATTACAAGCAAGAAA-TAACGCTCGTGCCTTGTTCATTGGTTCGTT-GGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC-TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG-CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA-TAACGGAAATTGGGTT-CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTACTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAAA] [-] EMBL CD134104 [AGCTTGGCGCCGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATCATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTA ] [-] EMBL CD094814 [ GCTTGGCGCTGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCTAAAAATTTATTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCCACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTG CATTAAACGTTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCT ] [-] EMBL CD163621 [ ATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAATAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAAGCGTTAGAGAAATAACCAATTTTA ] [+] EMBL AI976486 [ GGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAAAAAACACCCTTGTTATCGACCATTTCAATTTCCACAAAAGAGATGATGGTTTACACTtc ] [+] EMBL AI976246 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTATGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC TGATCACAGC ] [+] EMBL AI975136 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTT ] [+] EMBL AI976494 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTNTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGT ] [+] EMBL AI976287 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTCTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGA ] [+] EMBL AI975184 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTNTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGA ] [+] EMBL CD060591 [ ctagcctgGCTATTATTTGCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTGGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGA ] [-] EMBL CD119170 [ GGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTG CATTAAACGTTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCT ] [+] EMBL CD178137 [ TAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTG CATTAAACGTTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATANGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TC ] [+] EMBL BF936721 [ AAAATACCTTGGGGAATATTTATACCTTCGGGTCTAATTATTTTAGCCCCATCTGTTAGCGAAGTTTGGGGGTACCATTAAGCGTTAGAAAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAATTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACTGGGGGGGAAAGTTGGTGCACCCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAAC ] [-] EMBL CD168957 [ TTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTA ] [+] EMBL AI976733 [ ACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAATGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAAACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGGTGCTTTACTtg ] [+] EMBL SMT14544 [ TGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGNTCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACACTTCAACTTGATCACAGCATTACAAGCAAGAAATTAATGCNCGTGCCTTGTTCATTGGTTCGTTGGGATTTTTTGTCGAACTCGTTCTTTGNATtc ] [+] EMBL CD192420 [ GAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAATGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAAACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGGTGC TTACTGACAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGANACATCACCGAGTGGGTGAAACTCTCCCACCTAG CCAGTATACAATTNTGGATGACGTTGTTTACACCATCAAAATAGAAACAAAAGACGATTACCCGGAATTGGGTT CCTTT ] [+] EMBL SMAA18463 [ AGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCTACTTGNTCACAGCATTACAAGCAAGAAA TAACGCCCGT ] [-] EMBL CD127014 [ AGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTGCATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC CGATCACAGCATTACAAGCAAGAAA TAATGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTTTTGTCGAACTCGTTTTTTG ] [-] EMBL CD127040 [ AGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTAGCCAAATAC GTCGGAAGAAACA ] [+] EMBL CD186826 [ ATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAA ] [+] EMBL CD201326 [ CAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGTATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACATAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATC ] [-] EMBL CD151762 [ GGTGCA CGTTTGTTATACCGTGGGATAGGTATCTCAGCTGATCAAACTAGCCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTATTATAGCTATAACCCAGAC AAACAATAACAGATTATCCGAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TATCGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCACCCGTTCAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGT TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATAGTTATGTGGAACATCGCCGAGTGGGTGAAACTCTTCCACTTAG CCAGTATGCAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGTCGA TAACGGAAATTGGGTTGCCTTTCAATGCAGACGATGTCC ] [-] EMBL CD151805 [ GGTGCA CGTTTGTTATACCGTGGGATAGGTATCTCAGTTGATCAAACTAGCCCTTTAATCATTGATGTCTTACATGGATCGAAGACTTATTATAGCTATAACCCAGAC AAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCACCCGTTCAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGT TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGTTTCGACATAGTTATGTGGAACATCGCCGAGTGGGTGTAACTCTTCCACTTAG CCAGTATGCAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGTCGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCC ] [+] EMBL CD183337 [ TTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATG ] [+] EMBL CD134460 [ TTTGTCGAACTCGTTCTTTGAATCAACCGTTGAAACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGGTGC TTACTGACAATCTGTTGCGA ] [+] EMBL CD131213 [ GTGGGTGAAACTCTCCCACCTAGNCCAGTATACAATTTTGGATGACGTTGTTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATA ] [+] EMBL CD192090 [ GTGGGTGAAACTCTTCCACCTAG CCAGTATACGATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTT ] [+] EMBL CD147576 [ CTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCTTTTATCAGAAAGAAAATGAAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGCGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACGATATGAACGATTCCTCGTGGGTGCTTATCCTTATTATAGTAGTGCTATAT ] [-] EMBL CD149514 [ TTTACACCATCAAAATAGAAACAAAAGCCGA TATCGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTAGTAGTTGATTATTATCGTGTTGGTTATACACACCTATTAAGTGTCACACAAGTTCCTGTTAGTCCATTCCCTCATACACAATATG ] [-] EMBL CD145287 [ GAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTCGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTA ] [-] EMBL AI395193 [ tTACGGAGTA TCAAA TCGTAGTTGATTA TATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTT CTGTTCGTCCATTTACTCATACACAATATGAACGATTCGTCGTGGCTGCTTA CCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTACTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAAA] [-] EMBL AI395455 [ TCACAACAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTACTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAA ] [-] EMBL CD061044 [ CCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGCTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAGCAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTT ] [+] EMBL SM9241 [ ACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATA ] [-] EMBL SMT14543 [ AAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTANTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAANAAAATCNAANTTTACTATCNTGTTGTGTAGATTAGGTATTTANTTTTGATCTAATTTACAGTGGCTCTTTANTCTTTTGTTAANCCCTGCTACTCANTCTCAAGTTTGTATTATATGTGC ] consensusID : consensus_11180#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence [TTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATACTCGGGTCTAATTATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACATTAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGAAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTAGTAAGTTTTTATAATACATTAATATTCATAGCACTCTTTAATCACTGTGCCTGTGAATAACCTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATAC] [+] EMBL AI976355 [TTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATACTCGGGTCTAATTATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACATTAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGAAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTAGTAAGTTTTTATAATACATTAATATTCATAGCACTCTTTAATCACTGTGCCTGTGAATAACCTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATAC] consensusID : consensus_11180#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 344 fasta sequence [ACGGATATTCAAATTCGTAGTTGATTATTATCGGTGTTGGCCTATACACACCTAATTAGTGTCACACAAGTTCCTGGTTCGCTCCAATTACTCATACACCATATGAACGATTCCTCGTTGGCTGCCTAATCCTATTATAGATAGTGTCTATATCAAGTGTGAGATGGCCTCATATGCACATTAGAGTTTGTATATTGTGTATATAAAAGAGTGTGCCAGATATAGGTGTATATGAGAGATCTCGAGCAACAAGCGCTCTGTGTGATATATATGTGTAGTATATTTGAGACATCCTCTTTTCGAGAACACATCACATGTGTAGTAGTATGATGATATATCTACTA] [+] EMBL AW497746 [ACGGATATTCAAATTCGTAGTTGATTATTATCGGTGTTGGCCTATACACACCTAATTAGTGTCACACAAGTTCCTGGTTCGCTCCAATTACTCATACACCATATGAACGATTCCTCGTTGGCTGCCTAATCCTATTATAGATAGTGTCTATATCAAGTGTGAGATGGCCTCATATGCACATTAGAGTTTGTATATTGTGTATATAAAAGAGTGTGCCAGATATAGGTGTATATGAGAGATCTCGAGCAACAAGCGCTCTGTGTGATATATATGTGTAGTATATTTGAGACATCCTCTTTTCGAGAACACATCACATGTGTAGTAGTATGATGATATATCTACTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11180#0 AGCTTGGCGCCGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATT 60 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 ATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGA 120 consensus_11180#1 --TTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGA 58 consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 AAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTA 180 consensus_11180#1 AAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTA 118 consensus_11180#2 ----ACGGATATTCAA-ATTCGTAGTTGATTATTATCGGTGTTGGCCTATACACACCTAA 55 * ***** * * * * * * * ** * * * * * *** * * consensus_11180#0 TAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATA 240 consensus_11180#1 TAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATA 178 consensus_11180#2 TTAGT--GTCACACAAGTTCCTGGT---TCGCTCCAATTACTCATACACCATATGAACGA 110 * * * *** ** ** *** ** * *** * * *** * * * * consensus_11180#0 TTTATACTCGG--GTCTAAT--TATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACAT 296 consensus_11180#1 TTTATACTCGG--GTCTAAT--TATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACAT 234 consensus_11180#2 TTCCTCGTTGGCTGCCTAATCCTATTATAGATAGTGTCTATATCAAGTGTGAGATGGCCT 170 ** * * ** * ***** **** *** ** * *** ** * * * consensus_11180#0 --TAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGC 354 consensus_11180#1 --TAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGAAACCTCGTTGTAGTCGC 292 consensus_11180#2 CATATGCACATTAGAGTTTGTATATTGTGTATATAAAAGAGTGTGCCAGAT----ATAGG 226 ** * *** * *** * * * * * * ** * * * consensus_11180#0 TGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGA 414 consensus_11180#1 TGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGA 352 consensus_11180#2 TGTATATGAGAGATCTCGAGCAACAAGCGCTCTGTGTGATATATATG---TGTAGTATAT 283 ** * * * * * * * * * * * ** * ** *** * consensus_11180#0 TGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATG-GTTTA- 472 consensus_11180#1 TGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATG-GTTTAG 411 consensus_11180#2 TTGAGACATCCTCTTTTCGAGAACACATCACATGTGTAGTAGTAT-GATGATATATCTAC 342 * *** * * * ** * *** ** * * * ****** * ** consensus_11180#0 ------------------------------CACTCTTTAATCACTGTGCCTGTAAATAAC 502 consensus_11180#1 TAAGTTTTTATAATACATTAATATTCATAGCACTCTTTAATCACTGTGCCTGTGAATAAC 471 consensus_11180#2 TA---------------------------------------------------------- 344 consensus_11180#0 CTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATACCGTGGG 562 consensus_11180#1 CTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATAC------ 525 consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 ATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAG 622 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 ACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACA 682 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 AACACTCAACTGATCACAGCATTACAAGCAAGAAATAACGCTCGTGCCTTGTTCATTGGT 742 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 TCGTTGGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAG 802 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 GGTGTTGTTTGTGGCAACCAGATGCTTACTGATAATCTGTTGCGATGGGTTTTGGGTGAG 862 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCT 922 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 AGCCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGAT 982 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 AACGGAAATTGGGTTCCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGAT 1042 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTA 1102 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACAC 1162 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTC 1222 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCA 1282 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 TTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCT 1342 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAA 1402 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGAT 1462 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 TAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTA 1522 consensus_11180#1 ------------------------------------------------------------ consensus_11180#2 ------------------------------------------------------------ consensus_11180#0 CTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAAA 1577 consensus_11180#1 ------------------------------------------------------- consensus_11180#2 ------------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||