These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11184#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 36 consensus length = 1087 fasta sequence [GCCCTGGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG--CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTG-AAACCGGTCGCATGCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATGCGTGGCGAGGTTAACCCGTGGTGGGGGAGTCGTAGCGAAAGCGAGTCCGATAAGGGCGTGAGTCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATGGCCAGGATGAAGCGTCGGTAAGACGTCGTGGAGGTCCGAACCCACTTCAGTTGAAAATGGAGGGGATGAGTTGTGGATAGGGGTGAAAGGCCAATCAAACACCGTGATAGCTGGTTCTCCCCGAAATGCATTTAGGTGCAGCGTTGCGTGGTTCTTGTTGGAGGTAGAGCACTGGATGGTCTAGGGGGCTTATCGGCTTACCGAAATCAGCCAAACTCCGAATGCTGGCAAGTGTAGCGTGGCAGTGAGACGGCGGNGGATAAGCTTCGCCGTCGAGAGGGAAACAGCCCAGATCATCAGCTAAGGCCCCTAAGTGGTGACTCAGTGGGAAAGGATGTGGAGTTGCGTAGACAACCAGGAGGTTGGCTTGGAAGCAGCCA] [+] EMBL CD085742 [GCCCTGGGGCGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGTATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTG AAACCGGTCGCATGCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGC ] [+] EMBL CD094942 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGCCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAACGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGTGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [+] EMBL CD085741 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGTATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTG AAACCGGTCGCATGCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAG ATGAGCCTGCGAGTTAGTGATGCGTGGCGAGGTTAACCCGTGGTGGG ] [+] EMBL CD095107 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [+] EMBL CD094442 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGAGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTG AAACCGGTCGCATGCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAG ATGAGCCTGCGAGTTAGTGATGC ] [+] EMBL CD094998 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [+] EMBL CD094635 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAATACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTGNAAACC GTCGCAT ] [+] EMBL CD094910 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [+] EMBL CD094538 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCTATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGG ] [+] EMBL CD094693 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAG ] [+] EMBL CD094636 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCATGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGG ] [+] EMBL CD094673 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGG ATTTCGCNCGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTG ] [+] EMBL CD094845 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [+] EMBL CD094606 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTC ] [+] EMBL CD094608 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTTCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATA ] [+] EMBL CD094934 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTG ] [+] EMBL CD094925 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTG ] [+] EMBL CD085728 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTCGTGGGGGCCTTGTG ] [+] EMBL CD094566 [ GGGGAGTTGATGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTTTAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [+] EMBL CD085720 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [+] EMBL CD094881 [ GGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGCGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTG ] [-] EMBL CD095370 [ GGGAGCTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGG ] [-] EMBL CD094741 [ GGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATAGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGTGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGG ] [-] EMBL CD095128 [ GGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCCGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGG ] [-] EMBL CD094892 [ GGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGG ] [-] EMBL CD094917 [ GGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCCTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTG ] [-] EMBL CD094829 [ GGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGG ] [-] EMBL CD094779 [ GGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGG ] [-] EMBL CD094576 [ GGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGG ] [-] EMBL CD085738 [ TGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTG AAACCGGTCGCATGCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATGCGTGGCGAGGTTAACCCGTGGTGGGGGAGTCGTAGCGAAAGCGAGTCCGATAAGGGCGTGAGTCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATGGCCAGGATGAAGCGTCGGT ] [+] EMBL CD094321 [ TGCGTGGTGACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGCGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTG AAACCGGTCGCATGCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATGCGTGGCGAGGTTAACCCGTGGTCGGng ] [-] EMBL CD094597 [ AGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGTGAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTG AAACCGGTCGCATGCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATGCGTGGCGAGGTTAACCCGTGGTGGGGGAGTCGTAGCGAAAGCGAGTCCGATAAGGGCGTGAGTCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATGGCCAGGATGAAGCGTCGGT ] [+] EMBL CD093957 [ AAAC AGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCT ] [-] EMBL CD159465 [ AGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAAT ] [-] EMBL CD135978 [ GGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCG CGTGAATCTGGCGGGACCACCCGTCAAGCCTAAATACTCCTTG ] [+] EMBL CD086301 [ TCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATGCGTGGCGAGGTTAACCCGTGGTGGGGGAGTCGTAGCGAAAGCGAGTCCGATAAGGGCGTGAGTCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATGGCCAGGATGAAGCGTCGGTAAGACGTCGTGGAGGTCCGAACCCACTTCAGTTGAAAATGGAGGGGATGAGTTGTGGATAGGGGTGAAAGGCCAATCAAACACCGTGATAGCTGGTTCTCCCCGAAATGCATTTAGGTGCAGCGTTGCGTGGTTCTTGTTGGAGGTAGAGCACTGGATGGTCTAGGGGGCTTATCGGCTTACCGAAATCAGCCAAACTCCGAATGCTGGCAAGTGTAGCGTGGCAGTGAGACGGCGGNGGATAAGCTTCGCCGTCGAGAGGGAAACAGCCCAGATCATCAGCTAAGGCCCCTAAGTGGTGACTCAGTGGGAAAGGATGTGGAGTTGCGTAGACAACCAGGAGGTTGGCTTGGAAGCAGCCA] consensusID : consensus_11184#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 101 fasta sequence [ACATCATCTCCACTATCGCCTACACCACATAAT-ANGACTATTAATTAAAC-AGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTGTTGTACTGGGT] [+] EMBL CD067930 [ACATCATCTCCACTATCGCCTACACCACATAAT ANGACTATTAATTAAAC AGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTGTTGTACTGGGT] [+] EMBL CD067943 [ CATCATCTCCACTATCGCCTACACCACA ACTCATGACTATTAATAAAACGAGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTGTTGTACTGGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11184#0 GCCCTGGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAA 60 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 TGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCG 120 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 GGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGT 180 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 GGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATG 240 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 TGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTG 300 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 CGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAG 360 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 CGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATTTCGCGTGAATC 420 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 TGGCGGGACCACCCGTCAAGCCTAAATACTCCTTGGTGACCGATAGTGGATGAGTACCGT 480 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 GAGGGAAGGGTGAAAAGTACCCCGGGAGGGGAGTGAAAGAGTTCCTGAAACCGGTCGCAT 540 consensus_11184#1 --------------------------------------------------------ACAT 4 *** consensus_11184#0 GCAAGCCGTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTA 600 consensus_11184#1 CATCTCCACTATCGCCTACACCAC-ATAATANGACTATTAATTAAACAG--TGTGAGTGA 61 ** * **** ** * ** ** * ** ** ** **** * consensus_11184#0 GTGATGCGTGGCGAGGTTAACCCGTGGTGGGGGAGTCGTAGCGAAAGCGAGTCCGATAAG 660 consensus_11184#1 CTGTTTCATTTT----TCAAATTGT--TGGTGTTGTTGTACTGGGT-------------- 101 ** * * * * ** ** *** * ** *** * consensus_11184#0 GGCGTGAGTCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATGGCCAGGATGAAGC 720 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 GTCGGTAAGACGTCGTGGAGGTCCGAACCCACTTCAGTTGAAAATGGAGGGGATGAGTTG 780 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 TGGATAGGGGTGAAAGGCCAATCAAACACCGTGATAGCTGGTTCTCCCCGAAATGCATTT 840 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 AGGTGCAGCGTTGCGTGGTTCTTGTTGGAGGTAGAGCACTGGATGGTCTAGGGGGCTTAT 900 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 CGGCTTACCGAAATCAGCCAAACTCCGAATGCTGGCAAGTGTAGCGTGGCAGTGAGACGG 960 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 CGGNGGATAAGCTTCGCCGTCGAGAGGGAAACAGCCCAGATCATCAGCTAAGGCCCCTAA 1020 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 GTGGTGACTCAGTGGGAAAGGATGTGGAGTTGCGTAGACAACCAGGAGGTTGGCTTGGAA 1080 consensus_11184#1 ------------------------------------------------------------ consensus_11184#0 GCAGCCA 1087 consensus_11184#1 ------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||