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Schistosoma mansoni
cluster # 11186 cluster # 11186       Sequences # 38       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11186#0 length = 553 sequences # 36  
consensus_11186#1 length = 371 sequences # 2  

consensusID : consensus_11186#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 36
consensus length = 553
fasta sequence
                              [TCTTTCCATCAATGTATCTTGTGCTA-AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG-AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA-CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT-GTTACTACGAGAGGTGTTTGACTTCTTTTGT-TGACA-TTTTTGTTCTC-TTTG-AC-AAACGGAAC-AA-GAAACAACAAATTTACTCAG-TTGTCCAGCTGACATTCTTGC-AATTAATTCATA-TTCATCAACAGTTAA-T-TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCACTA]

[+] EMBL CD070319             [TCTTTCCATCAATGTATCTTGTGCTATATGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTGAAAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGACCCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATTGGTTACTACGAGAGGGGTTTGACTTCTTTT T TGgt                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD070216             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTCGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAACTCACTTTCATCATCCGACGCAGTTTAA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTGNAC  AACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATNCACAGTTAA T TTTGTACAT                                                                                                                                                                                                ]
[+] EMBL CD070259             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGNTGTTTGACTTCTTTTGG TGACA TTTTTGTTCTC T                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD070451             [      CATCAATGTATCTTGTGCTA AAGTCCGCGGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTTTGTGACA  TTTTGNTCTC                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD070378             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTT                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD198921             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTGNAC  AACGGAAC AA GAAAC ACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATATTTCAT                                                                                                                                                                                                                      ]
[+] EMBL CD198966             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGTACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGNTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTG AC AAACGGAAC AA GAAAACACAAATTTACTTAG TTGTCCAGCTGACATTCTTGC AATT ATTCATA TT                                                                                                                                                                                                                         ]
[+] EMBL CD070230             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTG AC AAACGGAACNAANGAAAC AC AATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAA                                                                                                                                                                                                                                  ]
[+] EMBL CD070206             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCCGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTA TATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTGNAC  AACGGAAC AA GAAACAAACAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTA                                                                                                                                                                                                                                   ]
[+] EMBL CD070349             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTTG TGACA TT                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD070438             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT NGTACTACGAGAGGTGTTTGACTTCTTTTGN TGACAct                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD070350             [      CATCAATGCATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT T                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD070335             [      CATCAATGTATCTTGTGCTA TAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGGTTGA CCTGTAGAATCTAATTGCTGTTTGGATCGAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCT                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD070422             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GNTACTACGAGAGGTGTTTGACTTC                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD070468             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGG                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD070413             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTNGTTGGATGAAGTATTATTATT GNTACTACGAGAG                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD070330             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTG AC AAACGGGAC AA                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD070336             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGNTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACATTTTTTGTTCTCTTTTG AC NAACGGAA                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD070344             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGNTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTGNAC  AACGGA                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD070365             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGNTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGNTCTC TTTG AC  AACGGna                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD070337             [      CATCAATGTATCTTGTGCTA AAGTCCGCAGTTGATTTGCACCATTATTACGATCATTATTATTATTTCTGCTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTG AAGCATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGNTTGA CCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA  TTTTGTTCTC TTTG AC GAAC                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD070428             [                                                                                                                                                                                                           TGGATGAAGTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TNTG AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070231             [                                                                                                                                                                                                                 AAGTATTA TATT GTTACTACGAGAGGTGTTTGACTTCTTTTG  TGACA TTTTTGTTCTC TTGN AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCTATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070193             [                                                                                                                                                                                                                   GTATTATTATT GTTACTACGAGAGGTGTTTGACTTCTTTTGT TGACA TTTTTGTTCTC TTTG AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCACATGACCAGGCTGTATAACTTCCACGATGCGTTGAAATGGGTGTAGTATCATCACTA]
[-] EMBL CD070368             [                                                                                                                                                                                                                                              GTTTGAC TCTTTNGT GNACA  TTTTGTTCTC TNTG AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070320             [                                                                                                                                                                                                                                                       CTTTTGT TGACA TTTTTGTTCTC TTTG AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATGAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070374             [                                                                                                                                                                                                                                                           TGT GNACA TTTTTGTTCTC TTGN AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACGGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCTATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD198962             [                                                                                                                                                                                                                                                                 ACA TTTTGTTTCTC TTTG AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGAACATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070371             [                                                                                                                                                                                                                                                                     aTTTTGTTCTC  TTG ACAAAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070220             [                                                                                                                                                                                                                                                                       TTTGTCCTC TTCG AC AAACGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATATCTTCCACGAACCGTTGAAATGGGTGTAGTACCGTCA   ]
[-] EMBL CD070375             [                                                                                                                                                                                                                                                                             CTC  TTG ACAAAACGGAAC AA GAAACAACAAA TTACTCAGTTTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTNGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCTATCACATCCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD198925             [                                                                                                                                                                                                                                                                                      AC AAGCGGAAC AA GAAACAACAAATTTACTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCACA TTCATCAACAGTTAA T TTTGTGCATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGAACATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070393             [                                                                                                                                                                                                                                                                                                            acctcaTTCCTCAG TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070401             [                                                                                                                                                                                                                                                                                                                           TTGTCCAGCTGACATTCTTGC AATTAATTCATA TTCATCAACAGTTAA T TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTCGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD199133             [                                                                                                                                                                                                                                                                                                                                CAGCTGACATTCTTGC AA TAATTCATA TTCATCAACAGTTAATT TTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGAACATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]
[-] EMBL CD070470             [                                                                                                                                                                                                                                                                                                                                 AGCTGACATTC TGCAAATTNAATCATA TTCATC ACAGTTAA TNNTNGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCTATCACATTCTGGGCAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGTAGTACCATCA   ]


>consensus_11186#0 TCTTTCCATCAATGTATCTTGTGCTAAAGTCCGCAGTTGATTTGCACCATTATTACGATC ATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTGAAGC ATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGACC TGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATTGTTACTACGAGAGGTGTTTGA CTTCTTTTGTTGACATTTTTGTTCTCTTTGACAAACGGAACAAGAAACAACAAATTTACT CAGTTGTCCAGCTGACATTCTTGCAATTAATTCATATTCATCAACAGTTAATTTTGTACA TGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAA ATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGC ACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGT AGTACCATCACTA



consensusID : consensus_11186#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 371
fasta sequence
                              [CGCAGTTTGACCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATTGTTACTACGAGAGGTGTTTGACTTCTTTTGTTGACATTTTTGTTCTCTTTGACAAACGGAACAAGAAACAACAAATTTACTCAGTTGTCCAGCT-GACATTCTTGCAATTAATTCATATTCATCAACAGTTAATTTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCTATCACATTCTGGGCAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGATGTAAAGAAACGGGCA]

[-] EMBL CD070256             [CGCAGTTTGACCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATTGTTACTACGAGAGGTGTTTGACTTCTTTTGTTGACATTTTTGTTCTCTTTGACAAACGGAACAAGAAACAACAAATTTACTCAGTTGTCCAGCT GACATTCTTGCAATTAATTCATATTCATCAACAGTTAATTTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCTATCACATTCTGGGCAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGATGTAAAGAAA      ]
[-] EMBL CD070316             [                                                                                                                    AAACAACAAATTTACTCAGTTGTCCAGCTGGACATTCTTGCAATTAATTCATATTCATCAACAGTTAATTTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCGCGCTGGATCATTTGTTTAGTAGTTGGTAAATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAGCTTCCACGTTGTAAAGCAACGGGCA]


>consensus_11186#1 CGCAGTTTGACCTGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATTGTTACTACG AGAGGTGTTTGACTTCTTTTGTTGACATTTTTGTTCTCTTTGACAAACGGAACAAGAAAC AACAAATTTACTCAGTTGTCCAGCTGACATTCTTGCAATTAATTCATATTCATCAACAGT TAATTTTGTACATGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTT AGTAGTTGGTAAATAAGCTCTATCACATTCTGGGCAAACATCACCTTTAGATTCTGCCTG ACTACATGCAGCACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGATGTAA AGAAACGGGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11186#0      TCTTTCCATCAATGTATCTTGTGCTAAAGTCCGCAGTTGATTTGCACCATTATTACGATC 60
consensus_11186#1      ------------------------------------------------------------
                                                                                   

consensus_11186#0      ATTATTATTATTTCTGTTGTTAATATTTGAACAGTGCTTACTCCGACTTATGATTGAAGC 120
consensus_11186#1      ------------------------------------------------------------
                                                                                   

consensus_11186#0      ATCTTCTGTTTCTTTATTTTCATCGCTGAATTCACTTTCATCATCCGACGCAGTTTGACC 180
consensus_11186#1      ------------------------------------------------CGCAGTTTGACC 12
                                                                       ************

consensus_11186#0      TGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATTGTTACTACGAGAGGTGTTTGA 240
consensus_11186#1      TGTAGAATCTAATTGCTGTTTGGATGAAGTATTATTATTGTTACTACGAGAGGTGTTTGA 72
                       ************************************************************

consensus_11186#0      CTTCTTTTGTTGACATTTTTGTTCTCTTTGACAAACGGAACAAGAAACAACAAATTTACT 300
consensus_11186#1      CTTCTTTTGTTGACATTTTTGTTCTCTTTGACAAACGGAACAAGAAACAACAAATTTACT 132
                       ************************************************************

consensus_11186#0      CAGTTGTCCAGCTGACATTCTTGCAATTAATTCATATTCATCAACAGTTAATTTTGTACA 360
consensus_11186#1      CAGTTGTCCAGCTGACATTCTTGCAATTAATTCATATTCATCAACAGTTAATTTTGTACA 192
                       ************************************************************

consensus_11186#0      TGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAA 420
consensus_11186#1      TGTTCTATGCATCCAAAGTTGGCAACTATCACACTGGATCATTTGTTTAGTAGTTGGTAA 252
                       ************************************************************

consensus_11186#0      ATAAGCTCGATCACATTCTGGACAAACATCACCTTTAGATTCTGCCTGACTACATGCAGC 480
consensus_11186#1      ATAAGCTCTATCACATTCTGGGCAAACATCACCTTTAGATTCTGCCTGACTACATGCAGC 312
                       ******** ************ **************************************

consensus_11186#0      ACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGAACCGTTGAAATGGGTGT 540
consensus_11186#1      ACATTTATTTGTTTCATATGACCAGGCTGTATAACTTCCACGATGTAAAGAAACGGGCA- 371
                       *******************************************      **** ***   

consensus_11186#0      AGTACCATCACTA 553
consensus_11186#1      -------------
                                    




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)