These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11199#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 37 consensus length = 1037 fasta sequence [GATAATACAAAAG-TTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC-TGGTGGTCTCAACAGAAGTC-TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG-ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC-TTTGGGAATTTGGTTCACC-A-GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA-CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG-ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA-GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG-AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTGATTGTCTTTAGTAAATTTT] [+] EMBL BF936761 [GATAATACAAAAG TTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAAGAAATTTGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCCAGTAGCTGAAGAAAACGGCTTTTGGAAATTTGGTTCACC A GGTGTTTACGTTATGA ] [+] EMBL AF321922 [ ATAATACAAAAGTTTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGCATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTGATTGTCTTTAGTAAATTT ] [+] EMBL SMT14557 [ ATAATACAAAAG TTTCTGCTTGAAAATGCATGAGTCAGTANCTNCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGNCGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGCTTGGTGGTCTCAACAGAAGTCTTCAAACTCGGTGACTTCGTGATCTTTGAAGACCACATTTACCTT CNGGGCTAGGGTTAAATAATNTTTNGGTCGGNCC NATCAGGGGGCATTTNGTACTCG ATTCCCA CACTTTCGGATGCC ATGCCAGgnc ] [+] EMBL AI018923 [ ggtcgtgncGCTAACATTG AAATGTC AG AAGTGGCACATCATATAC AAAATTAAC AGTATCGTACCAGANATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAGGNCAAAATCACATTCCCATACACAAGGNTTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCT ] [+] EMBL CD139103 [ atgcgtAATGTTAGGAAAGTGGCAGACCATATCTTTAAATCAGTACGTTTCAAACCAGAAATCGGGATCATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATATGGTACTCG ATTCCCAGCACTTTCGAATGCC ] [+] EMBL AI018958 [ AGAAATCGGAATAATTTCTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTNATGCAAGGCCGGTTTCACATGTACGAGGGATATAGCAATGTCACGGTCGCTCTCCCCATACGCGTTATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGc ] [+] EMBL AI018960 [ GAAATCGGAATAATTTGTNGAAGTNGTCTGGGAAAGTTGGCTGATGGAGTNAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTNGCCGAAAAGTAGTTGTNATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTTATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTC ] [+] EMBL SMT14637 [ ggaagGGAATAATTTTTGG AGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACAC AAGA TCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGA ] [+] EMBL AI974960 [ TTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAA ] [+] EMBL CD202725 [ AAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCC ] [-] EMBL CD133694 [ ATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGATAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCAC ] [-] EMBL CD190666 [ AAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAATTTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGC ] [+] EMBL CD191722 [ ATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGGTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCC ] [-] EMBL CD141056 [ ATGAAGTTATTGGGAGTCAGAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTTACAGCACTTTCGAATGCCTATGATAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAGCGAC TTTGAGAATATGGTTCACC A GGGTGTTTTCGTTATGAATGGTGATCCTTGTTACAAAGCATTCTGCTGAGTTCGCGATGCTGCTTAACATGGGAGGTGATGTAGTCGGTATGAG ] [+] EMBL CD120080 [ AAGTTATTGGGAGTCAAAATTCTTATGGTCAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACT ] [+] EMBL AI976065 [ AGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTNTC ] [+] EMBL CD139202 [ AATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACAGGGTGCTC ACGTGCTGAATTGATGNCATCATGGTTTGAGAAAGAT ATTGA ] [-] EMBL AI018903 [ AGGAGGAATTTGGTACTCG ATTCCCAGNACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAANAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCNTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAA TTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ] [-] EMBL SMT14600 [ AGGAGGAATTTGGTACTCG ATTCCCAGNACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAANAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCNTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAA TTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ] [-] EMBL CD064089 [ gtacccGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACGAATATGAGTGTGCTGGATGTCGGAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTAC ] [+] EMBL CD064341 [ TTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGT ] [+] EMBL CD165622 [ TTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCG ] [+] EMBL CD165710 [ TTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAGCTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCG ] [-] EMBL CD130845 [ TGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGG ] [-] EMBL CD139125 [ TGGTACTCG GTT CCAGCACTTTCGAATGCTTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATCGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGCCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAACTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCT ] [+] EMBL CD126784 [ TGGTACTCGAATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGG ] [-] EMBL CD064102 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAAT ] [-] EMBL CD064073 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTG AG AAACGGC TTTGGG ATTT GTTCACC A GGGTGTTTACGTTAT ] [-] EMBL CD166580 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGG ATTT GTTCACC A GGGTGTTTACGTT ] [-] EMBL CD064180 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGG ATTTGGTTCACCGA GGGTGTTTAC ] [-] EMBL CD064373 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGT ACC A GGGTGcta ] [-] EMBL CD064262 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATT GTTCACC ATGGGTGTTTACGTTATGAATGTTCGTCga ] [+] EMBL CD134777 [ AGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCC ] [-] EMBL AI018928 [ GATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTG TTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ] [-] EMBL SMT14556 [ TCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTG TTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTGATTGTCTTTAGTAAATTTT] [-] EMBL SMT14636 [ TGT GAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAAGAA TTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ] [-] EMBL AI018959 [ GTGCTGGATGTCGAAAGCGAATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAANNATTTTCTCCCTTTGTG ] consensusID : consensus_11199#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 299 fasta sequence [CCGCCCTAACATGGGTTGTGATGNAGCCGGTATGAGTACGAATCCCGGAAGTTGTAATTGCCCGGCACTGTGGAANTCAAGTGTTCGCTGTTCACCAGTGACAAACAAAAGTGTGCNGGATGNCGAAANCGATTTGAAGCCGAACCATGAAGAANTCAGGGCCAAAGGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAAGTGTNTTTGTGCAATGAATCAAGCTTTGTGAACGATGTCTCCNTTN] [-] EMBL SMW714 [CCGCCCTAACATGGGTTGTGATGNAGCCGGTATGAGTACGAATCCCGGAAGTTGTAATTGCCCGGCACTGTGGAANTCAAGTGTTCGCTGTTCACCAGTGACAAACAAAAGTGTGCNGGATGNCGAAANCGATTTGAAGCCGAACCATGAAGAANTCAGGGCCAAAGGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAAGTGTNTTTGTGCAATGAATCAAGCTTTGTGAACGATGTCTCCNTTN] consensusID : consensus_11199#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 167 fasta sequence [TGAGCGACCATGAGAGTCTGGCACAGGTGCTCACGTGCTGATTGATGCATCATGGTTTGAGAGATATTGAAAACTGCCCAAGATTGATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAA] [+] EMBL AA960684 [TGAGCGACCATGAGAGTCTGGCACAGGTGCTCACGTGCTGATTGATGCATCATGGTTTGAGAGATATTGAAAACTGCCCAAGATTGATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11199#0 GATAATACAAAAGTTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATG 60 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 TCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAA 120 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 TTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCAT 180 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 ACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATAT 240 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 TTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGG 300 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 GATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAA 360 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 TTCTTATGGTTAGTAATGCTGCTGGTGGTCTCAACAGAAGTCTCAAACTCGGTGACTTCG 420 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 TGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGAC 480 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 CGAATCAGGAGGAATTTGGTACTCGATTCCCAGCACTTTCGAATGCCTATGACAGAGACC 540 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 TACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGCTTTGGGAATTTGGTTCACCAGG 600 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 GTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACACCTGCTGAGTGCACGATGCTGC 660 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 -------------------------------------------------------CCGCC 5 consensus_11199#0 TTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGC 720 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 CTAACATGGGTTGTGATGNAGCCGGTATGAGTACGAATCCCGGAAGTTGTAATTGCCCGG 65 consensus_11199#0 ACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCG 780 consensus_11199#2 ------------------------------------------------------------ consensus_11199#1 CACTGTGGAANTCAAGTGTTCGCTGTTCACCAGTGACAAACAAAAGTGTGCNGGATGNCG 125 consensus_11199#0 AAAGCGATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACAGGTGCTCAACGTGCTGAAT 840 consensus_11199#2 ---------------TGAGCGACCATGAGAGTCTGGC-ACAGGTGCTCA-CGTGCTGA-T 42 consensus_11199#1 AAANCGATTTGAAGCCGAACCATGAAGAANTCAGGGCCAAAGGTGCTCAACGTGCTGAAT 185 ** * * * ** *** * ********* ******** * consensus_11199#0 TGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTC 900 consensus_11199#2 TGATGCA-TCATGGTTTGAGA-GATATT--GAAAACTGCCCAA-GATTGA-TTGGATGTC 96 consensus_11199#1 TGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTC 245 ******* ************* **** * ************ ****** ********* consensus_11199#0 ACACTTA-GTGTTTT-GTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTA 958 consensus_11199#2 ACACTTA-GTGTTTT-GTGCAATGAATCA-GCTTTGTGAACAATTTTCTCTCTTTGTGTA 153 consensus_11199#1 ACACTTAAGTGTNTTTGTGCAATGAATCAAGCTTTGTGAACGATGTCTCCNTTN------ 299 ******* **** ** ************* *********** ** * * * consensus_11199#0 CTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTG 1018 consensus_11199#2 CTTGCTGAAATGAA---------------------------------------------- 167 consensus_11199#1 ------------------------------------------------------------ consensus_11199#0 ATTGTCTTTAGTAAATTTT 1037 consensus_11199#2 ------------------- consensus_11199#1 ------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||