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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11201#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 37 consensus length = 1601 fasta sequence
[AAAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA-TCTGGTGCAAACGAACACATCCACGTCCCACACAG-ACA-TCATAGGCTCTCTACATATATAG-A-CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA---T--TTAT-CAGCTTTTTACTCATCTGTACACTATGTTGCCTTGCCATTAATATTATTTCACCACTCGTTATCTTACCTTATCTGTAACTAATATAAATCTCCACTTTTCCGCCTACTATGGTAAACAAATATCCTACACTATACCCTTCCTAATGCCTATACTCTGATTCGTAACCTACACTTCACTATATAGTCAATAAAAACATTGCATCGAAGCCTTACCCACAGTCCATAATTTGTAACTGTCTGATAAGCTTGTAACATGGTACTTATAGAAATAGTGTTTTCCAACAGGATGTGAAACACAGAGCATTGTGTGAGGTATGATATGTATCCAAAAAATAAGCGTAAATGAGCCTAACATCACAAAAGGAGGGAGGGTGGAGTTACTGACCAGCAAGCACTGATGGTGTGGGCGATGATTTCAATCCACCCGTGTTTGTGGGGCAGAACATTTTGTTTGTATCAGGCTCTTTATGGATGAGAACAAGTCAATAGATCTGTGATATTGAGATTGTTCACCTACACTCACCATTAAGACTCATGTTTCTAATTTTTGTGCTGGATTAACTATTCTACTAAGACAACCTTTAACATGCTAACTCGGACTTTTACATGAAAACTGTGTGGCAGGCATCGGATGATGAAAAAAAACTGACTGTAAAGGATATGGTTGCTATTTTACTCAACACTCTACTCTCTATATGCACT-CTCTGTTCTTCCTCATTCCAATCTTGACTTCCCTCCTTCATTGGAACCTACTCCACCTTGATAAATATCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT-CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGTTTCTCTTTTGTTTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGAGCGCGCTTTCCCAAGGTCATAGCTCGAACCAGGCGCTCCACAAGCCTACTTTATAACAACTATAAACTTAAAAAGCTGCATTAC]
[+] EMBL CD088003 [AAAATTTGAAAAACACAGATCAAGAACACGTGAAAGCTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGCTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACAGTCATAGGCTCTCTACATATATAG AGCTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTATACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACACTCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTT ]
[+] EMBL CD088019 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCAT ]
[+] EMBL CD088033 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTACACTATGT ]
[+] EMBL CD088020 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAANCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTACACTAT ]
[+] EMBL CD088010 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTACACT ]
[+] EMBL CD088036 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAAACTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTAC CTA ]
[+] EMBL CD088016 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAANCGGTTAGCATAGAACAAAACAANCT ]
[+] EMBL CD088009 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGGCAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGCGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGCAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTGCAANCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTAC ]
[+] EMBL CD087999 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTAC ]
[+] EMBL CD088028 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTA ]
[+] EMBL CD088039 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTGAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAANCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA C TTAT CAGCTTTCTACTCAT ]
[+] EMBL CD087991 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAGGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCGGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCTTAGATTCTGGTGCAAACGAACACATCCACGTCCCACACAGAACA TCATAGGCTCTCTACATATATAGAA CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTAC ]
[+] EMBL CD088027 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTCATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAANCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTC ]
[+] EMBL CD088037 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATCCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTC ]
[+] EMBL CD088035 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACAT CACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCAACCATCAACCGGTTAGCATAGAA ]
[+] EMBL CD087988 [ AAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATTGATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAGACTCATTGATCAAGCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCTGTCGCTTAACGACGCTTATAAATACCCTAAAACGTCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT C ]
[-] EMBL CD132236 [ ttATTAATCAACCCCTCACCTGCATAGA TCTGGTGCAAACGAACACATCCACGTCCCACACAG ACA TCATAGGCTCTCTACATATATAG A CTGAATCGCCTTATTTCCCTACCTTGTAGTTGTATTAGATACTTTCCCCTCCCTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGATCTATCAATACTCGGTCGCTACACGACGCTTATAAATAtc ]
[+] EMBL CD191559 [ GTAGTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGACCTATCAATACTCGGTCGCTAAACGACGCTTATAATTACCCTAAAACGTCAGAAGGAACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTA T TTAT CAGCTTTTTACTCATCTGTACACTATGTTGCCTTGCCACTAATATTATTTCACCACTCGTTATCTTACCTTATCTGTAACTAATATAAATCTCCACTTTTCCGCCTACTATGGTAAACAAATATTCTACACTATACCTTTCCTAATGCCTATACTCTGATTCGTAACCTACACTTt ]
[+] EMBL CD145442 [ CTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCACTGGATCTATCAATACTCGGTCGCTAAACGACGCTTATAAACACCCTAAAACATCAGAAGAAACGCACAATCGACTGCCTACTGCCAGTTGTCGTACAACCACAGAACCTGTCACCCATCAACCGGTTAGCATAGAACAAAACAAACTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCTATTCT TTAT CAGCTTTTTACTCATCTGTACACTATGTTGCCTTGCCATTAATATTATTTCACCACTCGTTATCTTACCTTATCTGTAACTAATATAAATCTCCACTTTTCCGCCTACTATGGTAAACAAATATCCTACACTATACCCTTCCTAATGCCTATACTCTGATTCGTAACCTACACTTCATTATATAGTCAATAAAAACATTGCATCGAAGCCTTACCCACAGTCCATAATTTGTAACTGTCTGATAAGCTTGTAACATGGTACTTATAGAAt ]
[-] EMBL CD191184 [ TAGTGGGAGTNAATTCTGGTCTA TCCTTATCCAG TTTTACTCATCTGTACACTATG TGCCCTGCCATTAATATTATTTCACCACTCGTTATCTTACCTTATCTGTAACTGATATAAATCTCCACTTTTCCGCCTACTATGGTAAACAAATATCCTACACTATACCCTTCCTAATGCCTATACTCTGATTCGTAACCTACACTTCACTATATAGTCAATAAAAACATTGCATCGAAGCCTTACCCACAGTCCATAATTTGTAACTGTCTGATAAGCTTGTAACATGGTACTTATAGAAATAGTGTTTTCCAACAGAATGTGAAACACAGAG ]
[-] EMBL CD093911 [ tnAT CAG TTTTTACTCATCTGTACACTATGTTGCCTTGCCATTAATATTATTTCACCACTCGTTATCTTACCTTATCTGTAACTAATATAAATCTCCACTTTTCCGCCTACTATGGTAAGCAAATATCCTACACTATACCCTTCCTAATGCCTATACTCTGATTTGTAACCTACACTTCACTATATAGTCAATAAAAACATTGCATCGAAGCCTTACCCACAGTCCATAATTTGTAACTGTCTGATAAGCTTGTAACATGGTACTTATAGAAATAGTGTTTTCCAACAGGATGTGAAACACAGAGAATTGTGTGAGGTATGATATGTATCCAAAAAATAAGCATAAATGAGCCTAACATCACAAAAGGAGGGAGGGTGGAGTTACTGACCAGCAAGCACTGATGGTGTGGGCGATGATTTCAATCCACCCGTGTTTGTGGGGCAGAACATTTTGTTTGTACCAGGCTCTTTATGGATGAGAATAAGTCAATAG ]
[+] EMBL CD127794 [ TATTTTACCTTATCTGTAACTAATATAAATCTCCACTTTTCCGCCTACTATGGTAAACAAATATCCTACACTATACCCTTCCTAATGCCTATACTCTGATTTGTAACCTACACTTCACTATATAGTCAATAAAAACATTGCATCGAAGCCTTACCCACAGTCCATAATTTGTAACTGTCTGATAAGCTTGTAACATGGTACTTATAGAA AGTGTTTTCCAACAGGATGTGAAACACAGAGCATTGTGTGAGGTATGATATGTATCCAAAAAATAAGCGTAAATGAGCCTAACATCACAAAAGGAGGGAGGGTGGAGTTACTGACCAGCAAGCACTGATGGTGTGGGCGATGATCTCAATCCACCCGTGCTTGTGGGGCAGAACATTTTGTTTGTATCAGGCTCTTTATGGATGAGAACAAGTCAATAGATCTGTGATATT ]
[+] EMBL CD080394 [ agggAGCTTGTAAAATGATACTTATAGAAATAGTGTTTTCC ACAGGATGT AAA ACAGAGCATTGTGTGAGGTATGATATATATCCAAAAAATAAGCGTAAATGAGCCTAACATCACAAAAGGAGGGAGGGTGAAGTTACTGACCAGCAAGCACTGATGGTGAGGGCGATGACTTCAATCCACCCGTGTTTGTGGGGCAGAACATTTTATTTGTATCAGGCTCTTTATGGATGAGAACAAGTCAATAGATCTGTGATATTGAGATTGTTCACCTACACTCACCATTACGACTCATGTTTCTAATTTTTGTGCTGGATTAACTATTCTACTAAGACAACCTTTAACATGCTAACTCGGACTTTTACATGAAAACTGTGTGGCAGGCATCGGATGATG AAAAAAACAGACTGTAAAGGATATGGTTGCTATTTTACTCAACACTCTACTCTCTATATGCACT CTCTGTTCTTCCTCATTCGAATCTTGACTTCCCTCCTTCATTGGAACCTACTCCACCTTGATAAATATCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCACTCTTGNCACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTNCAT CTGTTCCGCTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTG ]
[+] EMBL CD077647 [ ctACAGAGCATTGTATGAGGTATGATATGTATCCAAAAAATAAGCGTAAATGAGCCTAACATCACAAAAGGAGGGAGGGTGGAGTTACTGACCAGCAAGCACTGATGGTGTGGGCGATGATTTCAATCCACCCGTGTTTGTGGGGCAGAACATTTTGTTTGTATCAGGCTCTTTATGGATGAGAACAAGTCAATAGATCTGTGATATTGAGATTGTTCACCTACACTCACCATTAAGACTCATGTTTCTAATTTTTGTGCTGGATTAACTATTCTACTAAGACAACCTTTAACATGCTAACTCGGACCTTTACATGAACACTGTGTGGCAGGC ]
[+] EMBL CD194957 [ GGTATGATATGTATCCAAAAAATAAGCGTAAATGAGCCTAACATCACAAAAGGAGGGAGGGTGGAGTTACTGACCAGCAAGCACTGATGGTGTGGGCGATGATTTCAATCCACCCGTGTTTGTAGGGCAGAACATTTTGTTTGTGTCAGGCTCTTTATGGATGAGAACAAGTCAATAGATCTGTGATATTGAGATTGTTCACCTACACTCACCATTAAGACTCATGTTTCTAATTTTTGTGCTGGATTAACTATTCTACTAAGACAACCTTTAACATGCTAACTCGGACTTTTACATGAACACTGTGTGGCAGGCATCGGATGATGAAAAAAAACCGACTGTAAAGGATATGGTTGCTATTTT ]
[+] EMBL CD086211 [ CAGCAAGCACTGATGGTGTGGGCGATGATTTCAATCCACCCGTGTTTGTGGGGCAGAACATTTTGTTTGTATCAGGCTCTTTATGGATGATAATAAGTCAATAGATCTGTGATATTGAGATTGTTCACCTACACTCACCATTAAGACTCATGTTTCTAATTTTTGTGCTGGATTAACTATTCTACTAAGACAACCTTTAACATGCTAACTCGGACTTTTACATGAAAACTGTGTGGCAGGCATCGGATGATAAAAAAAAACTGACTGTAAAGGATATGGTTGCTATTTTACTCAACACTCTACTCTCTATATGCAC ]
[-] EMBL CD088254 [ gagaAAAAAAAACTGACTGTAAAGGATATGGTTGCTATTTTACTTAACA CTACTCTCTCTATGCACT CTCTGTTCTTCCTCATTCCAACCTTGACTTCCCTCCTTCATTGGAACCTACTCCACCTTGATAAATATCACAACTCATTGCTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATAACCAAATGCCTTTCTGCTCCTCGGTTTCTCTTTTGTTTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGAGCGCGCTTTCCCAAGGTCATAGCTCGAACCAGGCGCTCCACAAGCCTACTTTATAACAACTATAAACTTAAAAAGCTGCATTAC]
[-] EMBL SM6431 [ ATGGTTGCTATTTTACTTAA ACACTACTCTCTATATGCACTGCTCTGTTCTTCATCGTNCCAATCCTGACTTCCCTCCTTCGATGGAACATACTCCACCTTGATAAATATCACAACTCATTGTTCTTTATTACTGCATTCTCTCTTCTGGAGCCCCTAATCGCAGNTCACTCTTGCAACATGAGCTAGTAACAATTTAATCTAATAATTTATCATACCTCCATACTGTTCCACTAATAAATGTTAAACATTGATTATCGCT ]
[+] EMBL CD097478 [ TTCATTGGAACCTACTCCACATTGATAAATATCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGGGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGTTTCTCTTTTGTTTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGA ]
[+] EMBL CD097468 [ TTCATTGGAACCTACTCCACCTTGATAAATATCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGATGCTCCTCGGTTTCTCTTCTGTTTTTTCTCCTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGA ]
[+] EMBL CD147976 [ TTCATTGGAACCTACTCCACCTTGATAAATATCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGGTTATCGTTCACATCCAAATGCCTTGCTGCTCCTGGGTTTATCT TTTTTTCTCTTCAGAATCTTGCTCTTAGGGTGAAGCTATGTAGCTTCTGACATCTGGAACAAGCTCGACGA ]
[+] EMBL CD097507 [ TTCATTGGAACCTACTCCACCTTGATAAATATCACAACTCATTGTTTTTTATTACTGCCTTCTCTCCTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGTTTCTCTTTTGTTTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGA ]
[+] EMBL CD097506 [ TTCATTGGAACCTACTCCACCTTGATAAATATCACAACTCATTGTTTTTTATTACTGCCTTCTCTCCTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGTTTCTCTTTTGTTTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGA ]
[-] EMBL CD148117 [ TCATTGGAACCTACTCCGCCTTGATAAATATCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACTTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGATGCTCCTCGGTTTCTCTTCTGTTTTTTCTCCTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGAa ]
[+] EMBL CD190071 [ CTTGATAAATATCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCAT CTGTTCCGCTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGTTTCTCTTTTGTTTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCTGACATCTGGAACAAGCTCGACGAGCGCACTTTCCCAAGGTC ]
[+] EMBL CD059896 [ ACAACTCATTGTTCTTTATTACTGCCTTCTCTCCTCTGGAGCCCCTAATCACACTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAGTAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGTTTCTCTT ATTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTGGAACAAGCTCGACGAACGCGCTTTCCCAAGG ]
[+] EMBL CD059953 [ ACAACTCATTGTTCTTTATTACTGCCTTCTCTCCTCTGGAGCCCCTAATCACACTTCACTCTTGCAACATGAGCTAGTATCAATTTAATCTAGTAATTTATCATACCTCCAT CTGTTCCACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGTTTCTCTT ATTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGACATCTG ]
consensusID : consensus_11201#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 183 fasta sequence
[TGGTTATTATTTTTATTTTACTCAACACTCTAATCTATATATGCACTCTCTGTTCTTCCTCATTCCAACCCTGACTTCCCTCCTTCATTGGAACCTACTCCACCTTGATAAATATCACAAATCATTGTTCTTTATTACTGCATTCTCTCCTCTGGAGTCTTTAATCGCAGTTCACTCTCCGTC]
[-] EMBL CD133848 [TGGTTATTATTTTTATTTTACTCAACACTCTAATCTATATATGCACTCTCTGTTCTTCCTCATTCCAACCCTGACTTCCCTCCTTCATTGGAACCTACTCCACCTTGATAAATATCACAAATCATTGTTCTTTATTACTGCATTCTCTCCTCTGGAGTCTTTAATCGCAGTTCACTCTCCGTC]
consensusID : consensus_11201#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 132 fasta sequence
[ACTGTGTGGCAGGCATCGGATGAGAAAAGAAAAAAAACTGACTGTAAAGGATATGGTTGCTATTTTACTTAACACTACTCTCTCTATGCACTCTCTGTTCTTCCTCATTCCAACCTTGACTTCCCTCCTCCC]
[+] EMBL CD183042 [ACTGTGTGGCAGGCATCGGATGAGAAAAGAAAAAAAACTGACTGTAAAGGATATGGTTGCTATTTTACTTAACACTACTCTCTCTATGCACTCTCTGTTCTTCCTCATTCCAACCTTGACTTCCCTCCTCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11201#0 AAAAATTGAAAAACACAGATCAAGAACACGTGAAAACTTCTTCCTTATCAAGTACGCATT 60
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 GATATGGAACAGTCTGCCTTCCGAAGTACGCATGGCAGACAAATTACATACGTTTACAAG 120
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 ACTCATTGATCAAGCCCTCACCTGCATAGATCTGGTGCAAACGAACACATCCACGTCCCA 180
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 CACAGACATCATAGGCTCTCTACATATATAGACTGAATCGCCTTATTTCCCTACCTTGTA 240
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 GTTGTATTAGATACTTTCCCCTCACTAATTCTTTTCAATTGAAGTAGACAGGCAACTCAC 300
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 TGGACCTATCAATACTCTGTCGCTAAACGACGCTTATAAATACCCTAAAACGTCAGAAGA 360
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 AACGCACAATCGACTGCCTACTGCCAGTGGTCGTACAACCACAGAACCTGTCACCCATCA 420
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 ACCGGTTAGCATAGAACAAAACAACCTCAGCGCGAATTTAGTGTGAGTTACTTCTTGTCT 480
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 ATTTATCAGCTTTTTACTCATCTGTACACTATGTTGCCTTGCCATTAATATTATTTCACC 540
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 ACTCGTTATCTTACCTTATCTGTAACTAATATAAATCTCCACTTTTCCGCCTACTATGGT 600
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 AAACAAATATCCTACACTATACCCTTCCTAATGCCTATACTCTGATTCGTAACCTACACT 660
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 TCACTATATAGTCAATAAAAACATTGCATCGAAGCCTTACCCACAGTCCATAATTTGTAA 720
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 CTGTCTGATAAGCTTGTAACATGGTACTTATAGAAATAGTGTTTTCCAACAGGATGTGAA 780
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 ACACAGAGCATTGTGTGAGGTATGATATGTATCCAAAAAATAAGCGTAAATGAGCCTAAC 840
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 ATCACAAAAGGAGGGAGGGTGGAGTTACTGACCAGCAAGCACTGATGGTGTGGGCGATGA 900
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 TTTCAATCCACCCGTGTTTGTGGGGCAGAACATTTTGTTTGTATCAGGCTCTTTATGGAT 960
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 GAGAACAAGTCAATAGATCTGTGATATTGAGATTGTTCACCTACACTCACCATTAAGACT 1020
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 CATGTTTCTAATTTTTGTGCTGGATTAACTATTCTACTAAGACAACCTTTAACATGCTAA 1080
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 CTCGGACTTTTACATGAAAACTGTGTGGCAGGCATCGGATGAT----GAAAAAAAACTGA 1136
consensus_11201#2 -------------------ACTGTGTGGCAGGCATCGGATGAGAAAAGAAAAAAAACTGA 41
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 CTGTAAAGGATATGGTTGCTATTTTACTCAACACTCTACTCTCTATATGCACTCTCTGTT 1196
consensus_11201#2 CTGTAAAGGATATGGTTGCTATTTTACTTAACACT--ACTCTCTCTATGCACTCTCTGTT 99
consensus_11201#1 ------TGGTTATTATTTTTATTTTACTCAACACTCTAATCTATATATGCACTCTCTGTT 54
** *** ** ********* ****** * *** * ***************
consensus_11201#0 CTTCCTCATTCCAATCTTGACTTCCCTCCTTCATTGGAACCTACTCCACCTTGATAAATA 1256
consensus_11201#2 CTTCCTCATTCCAACCTTGACTTCCCTCCTCCC--------------------------- 132
consensus_11201#1 CTTCCTCATTCCAACCCTGACTTCCCTCCTTCATTGGAACCTACTCCACCTTGATAAATA 114
************** * ************* *
consensus_11201#0 TCACAACTCATTGTTCTTTATTACTGCCTTCTCTCTTCTGGAGCCCCTAATCGCAGTTCA 1316
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 TCACAAATCATTGTTCTTTATTACTGCATTCTCTCCTCTGGAGTCTTTAATCGCAGTTCA 174
consensus_11201#0 CTCTTGCAACATGAGCTAGTATCAATTTAATCTAATAATTTATCATACCTCCATCTGTTC 1376
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 CTCTCCGTC--------------------------------------------------- 183
consensus_11201#0 CACTAATAAATGTTAAGCATTGATTATCGCTCATATCCAAATGCCTTGCTGCTCCTCGGT 1436
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 TTCTCTTTTGTTTTTTCTCTTCAGAATCTTGCTCTGAGGGTGAAGCTATGTAACTTCGGA 1496
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 CATCTGGAACAAGCTCGACGAGCGCGCTTTCCCAAGGTCATAGCTCGAACCAGGCGCTCC 1556
consensus_11201#2 ------------------------------------------------------------
consensus_11201#1 ------------------------------------------------------------
consensus_11201#0 ACAAGCCTACTTTATAACAACTATAAACTTAAAAAGCTGCATTAC 1601
consensus_11201#2 ---------------------------------------------
consensus_11201#1 ---------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||