These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 41 consensus length = 1135 fasta sequence [AACTAAAACCATATGGTTGGGGCTTTCCCGGTATTTAAATTGGGAGCATTGGCTATAAAACAGATAGGAAAGCCCCTGGCCAACTACCTGAAGCGCAAGGCCAAAACAAATGCATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATTATATCATT-TGTGGGAAACCCGACTAAAATTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGACCTTGGATCAGAAG-GTTGGGGGAAATTATCATTTTTGTGGTTGG-GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA-GAACATAATAA-GGATGAT-TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA-GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATTAAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACATTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTATGGATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTGCTTGCGAATTGGATCCAGAGGCTGTATGGGAATCCTTTTGCAAGCTGCTAGATGAAGCATTACAAGATGCTGAAATTAACCCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAAATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGCAAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTATGAAAACTGCTGGCCATATGTTATATTGGATGACACATCAGTCAAGGTTTAAAGCGTTGGCGTCGTACCACTTCAAAACAGCATTAGCATGTATACGTCTCANATATTTATTAAATGAGAAACCAAAGCTTATTGATGAGTGTCGTAAGGGGTTACTTTGCTATGGTTGTTTGGA] [+] EMBL CD148203 [AACTAAAACCATATGGTTGGGGCTTTCCCGGTATTTAAATTGGGAGCATTGGCTATAAAACAGATAGGAAAGCCCCTGGCCAACTACCTGAAGCGCAAGGCCAAAACAAATGCATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATTATATCATT TGTGGGAAACCCGACTAAAATTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGTCCTTGGATCAGAAGTGTT GGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD133356 [ AAGCCCCTGGCCAACTACCTGAAGCGCAAGGCCAAAACAAATGCATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATTATATCATT TGTGGGAAACCCGACTAAAATTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGACCTTGGATCAGAAGTGTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGCCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGC ] [-] EMBL CD127060 [ CCTGGCCAACTACCTGAAGCGCAAGGCCAAAACAAATGCATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATTATATCATT TGTGGGAAACCCGACTAAAATTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGACCTTGGATCAGAAGTGCTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTaca ] [+] EMBL CD181433 [ AATGCATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATTATATCATT TGTGGGAAACCCGACTAAAATTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGACCTTGGATCAGAAGTGTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACT ] [-] EMBL CD070758 [ TCATN TGTGGGAAACCCGACTAAAATTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGACCTTGGATCAGAAGTGCTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCA ] [-] EMBL CD070914 [ TCATTGTG GGGAAACCCGACTAAAATTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGACCTTGGATCAGAAGTGCTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCA ] [-] EMBL CD114740 [ TGGG AACCCGACTAAAATTAAAATTATAGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCCGTTGACCTTGGATCAGAAGTGTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCCCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATTAAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACATTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAG ] [+] EMBL CD112773 [ TGACCTTGGATCAGAGGTGTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGGA GTTGAGATTCAGGACGCCAAGGTC ] [+] EMBL CD112775 [ TGACCTTGGATCAGAAGTGTTGGGGGAAATTATCATTTTTGCGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTC ] [+] EMBL CD111074 [ gTGACCTTGGATCAGAAGTGTTGGGGGAAATTATCATTTTTGTGGTTGGTGGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTATCTATTCGCGTTAATGAGCTCATGACCGTAGGTTGAGATTCAGGACGCCAAGGTC ] [+] EMBL CD148086 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD148148 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD148060 [ GTTGGGGGAAATTATCATTTTTGCGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD148108 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATTAAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACATTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAAAATTCATATTGGGTGTTGACTTCGGAAGCACT ] [+] EMBL CD097463 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD147950 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATTAAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACATTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAATCACT ] [+] EMBL CD097421 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATTAAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACATTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACT ] [+] EMBL CD148028 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD148061 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD148067 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD148076 [ GTTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [-] EMBL CD148013 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148020 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148172 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148206 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATTAAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACATTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTC ] [-] EMBL CD148033 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148054 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD097439 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCCCTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAGCATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148071 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148171 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATGATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148199 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGGAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD097495 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [-] EMBL CD148002 [ TTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [+] EMBL CD148080 [ gcTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [+] EMBL CD148118 [ gcTGGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAG ] [-] EMBL CD148021 [ GGGGGAAATTATCATTTTTGTGGTTGG GGCCACTTGCCTTCTGCTTGAATATCGCCGGCAAGTAAGGAAA GAACATAATAA GGATGAT TGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGATTCAGGACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATTAAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACATTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTC ] [-] EMBL CD147935 [ agnnGAAANGAACATAATAANGGATGATNTGCGTACAACAAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTA GTTGAGA ] [+] EMBL CD150398 [ CGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTATGGATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTGCTTGCGGATTGGATCCAGAGGCTGTATGGGAATCCTTTTGCAAGCTGCTAGATGAAGCATTACAAGATGCTGAAATTAACTCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAAATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGCAAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTATGAAAACTGCTGGCCATATGTTATATTGGATGACACATCAGTCAAGGTTTAAAGCGTTGGCGTCGTACCACTTCAAAACAGCATTAGCATGTATACGTCTCANATATTTATTAAATGAGAAACCAAAGCTTATTGATGAGTGTCGTAAGGGGTTACTTTGCTATGGTTGTTTGG ] [+] EMBL CD150452 [ CGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTACGGATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTGCTTGCGAATTGGATCCAGAGGCTGTATGGGAATCCTTTTGCAAGCTGCTAGATGAAGCATTACAAGATGCTGAAATTAACCCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAAATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGCAAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTGGTATGAAAACTGCTGGCCATATGTTATATTGGATGACACATCAGTCAAGGTTTAAAGCGTTGGCGTCGTACCACTTCAAAACAGCATTAGCATGTATACGTCTCANATATTTATTAAATGAGAAACCAAAGCTTATTGATGAGTGTCGTAAGGGGTTACTTTGCTATGGTTGNTTGG ] [+] EMBL CD150384 [ CGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTATGGATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTGCTTGCGAATTGGATCCAGAGGCTGTATGGGAATCCTTTTGCAAGCTGCTAGATGAAGCATTACAAGATGCTGAAATTAACCCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAAATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGCAAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTATGAAAACTGCTGGCCATATGTTATATTGGATGACACATCAGTCAAGGTTTAAAGCGTTGGCGTCGTACCACTTCAAAACAGCATTAGCATGTATACGTCTCANATATTTATTAAATGAGAAACCAAAGCTTATTGATGAGTGTCGTAAGGGGTTACTTTGCTATGGTTGTTTGG ] [-] EMBL CD200395 [ TATAGGTATTTCTGTTCAGCGAAATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGCAAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTATGAAAACTGCTGGCCATATGTTATATTGGATGACACATCAGTCAAGGTTTAAAGCGTTGGCGTCGTTCCACTTCAAAACAGCATTAGCATGTATACGTCTCAAATATTTATTAAATGAGAATCCAAAGCTTATTGATGAGTGTCGTAAGGGGTTACTTTGCTATGGTCGTTAGGA] consensusID : consensus_11243#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 411 fasta sequence [ATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTATGGATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTGCTTGCGAATTGGATCCAGAGGCTGTATGGAATCCTTTTGCAAGCTGCTAGATGAAGCATTACAAGATGCTGAAATTAACCCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAAATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGCAAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTAT] [-] EMBL CD097291 [ATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATCAAACGGTTTCAAAATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTATGGATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTGCTTGCGAATTGGATCCAGAGGCTGTATGGAATCCTTTTGCAAGCTGCTAGATGAAGCATTACAAGATGCTGAAATTAACCCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAAATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGCAAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11243#0 AACTAAAACCATATGGTTGGGGCTTTCCCGGTATTTAAATTGGGAGCATTGGCTATAAAA 60 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 CAGATAGGAAAGCCCCTGGCCAACTACCTGAAGCGCAAGGCCAAAACAAATGCATTTTTC 120 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 AGGAACTATGTGTGCCTACCCCCAGCGCAATTATATCATTTGTGGGAAACCCGACTAAAA 180 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 TTAAAATTATTGGGGCTGCAAATACCAAAGGAGGTTAACAAGTTGAGTGAAGATGCTGCC 240 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 GTTGACCTTGGATCAGAAGGTTGGGGGAAATTATCATTTTTGTGGTTGGGGCCACTTGCC 300 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 TTCTGCTTGAATATCGCCGGCAAGTAAGGAAAGAACATAATAAGGATGATTGCGTACAAC 360 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 AAACACTGGATCAGCTAACTAGTCGCGTTAATGAGCTCATGACCGTAGTTGAGATTCAGG 420 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 ACGCCAAGGTCAGGGAGCTTGCTAGAGCAATAGCCATTTCTAGTCCTGGACATGACCATT 480 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 AAGATATGTAAAATAGTTAAATGTATGCCTTAAGTCTTTTTCCCAAATATAAATTCGACA 540 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 TTTATGTTTCTTGCTTTTTGACTTGTTGCGTTGAAATTGGTTCACAGCAAACGGTTTCAA 600 consensus_11243#1 ---------ATTTTTCAGGAACTATGTGTGCCTACCCCCAGCGCAATCAAACGGTTTCAA 51 ** * *** ** * * * ************* consensus_11243#0 AATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTATGG 660 consensus_11243#1 AATTCATATTGGGTGTTGATTTCGGAAGCACTCATGCATGCGCCAGGGTCTATACTATGG 111 ************************************************************ consensus_11243#0 ATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTG 720 consensus_11243#1 ATCTTAAGGTCGTTGGATGTAGCAGCACTAAAGTACCTCGGCTTGAAAGGCCTGATGGTG 171 ************************************************************ consensus_11243#0 CTTGCGAATTGGATCCAGAGGCTGTATGGGAATCCTTTTGCAAGCTGCTAGATGAAGCAT 780 consensus_11243#1 CTTGCGAATTGGATCCAGAGGCTGTATGG-AATCCTTTTGCAAGCTGCTAGATGAAGCAT 230 ***************************** ****************************** consensus_11243#0 TACAAGATGCTGAAATTAACCCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAA 840 consensus_11243#1 TACAAGATGCTGAAATTAACCCTGATCGGATCAATTGTATAGGTATTTCTGTTCAGCGAA 290 ************************************************************ consensus_11243#0 ATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGC 900 consensus_11243#1 ATAGTCTGTTGTTGTGGGATAAGAAGACATCCAATCCTCGAACTCGTGTTATCACGTGGC 350 ************************************************************ consensus_11243#0 AAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTA 960 consensus_11243#1 AAGATACACGTTCTTTGGATCTCGCCAAAAAGTTAAATCACTCTTTTATCTTTCGTAGTA 410 ************************************************************ consensus_11243#0 TGAAAACTGCTGGCCATATGTTATATTGGATGACACATCAGTCAAGGTTTAAAGCGTTGG 1020 consensus_11243#1 T----------------------------------------------------------- 411 * consensus_11243#0 CGTCGTACCACTTCAAAACAGCATTAGCATGTATACGTCTCANATATTTATTAAATGAGA 1080 consensus_11243#1 ------------------------------------------------------------ consensus_11243#0 AACCAAAGCTTATTGATGAGTGTCGTAAGGGGTTACTTTGCTATGGTTGTTTGGA 1135 consensus_11243#1 ------------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||