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Schistosoma mansoni
cluster # 11261 cluster # 11261       Sequences # 44       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11261#0 length = 827 sequences # 30  
consensus_11261#1 length = 301 sequences # 14  

consensusID : consensus_11261#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 30
consensus length = 827
fasta sequence
                              [TATTGGATTGTGATCGATGCAGGGTCCGGAGCATAACAGACTCAAGAAAAGATGTACAATAATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTGTTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTTCCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC-TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAACCTTTCTGAACAGCATTTGGCGCGCTTTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCANAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTG]

[+] EMBL BG930458             [TATTGGATTGTGATCGATGCAGGGTCCGGAGCATAACAGACTCAAGAAAAGATGTACAATAATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTGTTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BG930393             [                        atCGGAGCATAACAGACTCAAGAAAAGATGTACAATAATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTGTTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD141981             [                                         TCAAGAAAAGATGTACAATAATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAAC TTGTTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTTCCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAACCTTTCTGAACAGCATTTGGCGCGCTT                                                                                                                                                                                                                           ]
[-] EMBL CD138776             [                                         TCAAGAAAAGATGTCCAATAATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTGTTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTTCCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAA                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD138775             [                                         TCAAGAAAAGATGTACAATAATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTGTTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTTCCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCGAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAA                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD138783             [                                         TCAAGAAAAGATGTACAATAATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTGTTCCTGAAGAGCTCGAGACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTTCCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAA                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD142066             [                                                                                                                                         ACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTTCCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAACCTTTCTGAACAGCATTTGGCGCGCTT                                                                                                                                                                                                                           ]
[+] EMBL CD123449             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCTTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAAT                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123390             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCGAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAAT                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123453             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACACCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTCCTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGCGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACCGCGACCTTGCTGCAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGCCCACGCCTGAAT                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123452             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAAT                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123444             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAAT                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123443             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAAT                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123439             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAAT                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123436             [                                                                                                                                                                                                  TAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAAT                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD123386             [                                                                                                                                                                                                   AGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGC TTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATA                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD098054             [                                                                                                                                                                                                    GCGCTCGACAACTCGGATTGTGCCCTAGACATGCCATCTTNAACAGCATTAAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTC                                                                                                                                                                                                                                                                  ]
[+] EMBL CD161184             [                                                                                                                                                                                                                                 CATTCCATCTTTAACAGCATTTAGGTCCAACTGATCAAGAGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAA                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD153614             [                                                                                                                                                                                                                                                        GGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD145786             [                                                                                                                                                                                                                                                               aaggtaAAGTGAAAAAGGTTAATGGTCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD202618             [                                                                                                                                                                                                                                                                           AGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCACCCTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD202719             [                                                                                                                                                                                                                                                                                 TTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTG                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD145758             [                                                                                                                                                                                                                                                                                 TTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAACCTTTCTGAACAGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCANAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTG]
[+] EMBL CD145856             [                                                                                                                                                                                                                                                                                 TTCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTG                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL AA559480             [                                                                                                                                                                                                                                                                                  tnTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAA                                                                                                                                                                                                                                                             ]
[-] EMBL AA559451             [                                                                                                                                                                                                                                                                                     tnGGCCAGGANTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCNAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGT                                                                                                                                                                                                                                                                   ]
[-] EMBL AA559570             [                                                                                                                                                                                                                                                                                                TTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAA                                                                                                                                                                                                                                                      ]
[+] EMBL CD135090             [                                                                                                                                                                                                                                                                                                                                                  ACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTT                                                                                                                                                                                                                                                                              ]
[-] EMBL CD091554             [                                                                                                                                                                                                                                                                                                                                                                                       AATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACACAAGAGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAACCTTTCTGAACAGCATTTGGCGCGCTT                                                                                                                                                                                                                           ]
[+] EMBL CD120985             [                                                                                                                                                                                                                                                                                                                                                                                                  TCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACAC TGTGTCGAAGTTTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAACCTTTCTGAAC                                                                                                                                                                                                                                           ]


>consensus_11261#0 TATTGGATTGTGATCGATGCAGGGTCCGGAGCATAACAGACTCAAGAAAAGATGTACAAT AATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTG TTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTT CCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAAC AGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGA GTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATT TTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAA AACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTA AAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACACTGTGTCGAAGT TTGAATACTCCGTAGTTGACTTGGAAGTCGAAAAATGGCAACCTTTCTGAACAGCATTTG GCGCGCTTTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTAT TGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGA CTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAN AACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTG



consensusID : consensus_11261#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 301
fasta sequence
                              [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCCCACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT]

[-] EMBL CD145828             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCCCACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT]
[-] EMBL CD145776             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAACCGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAA                                                                  ]
[-] EMBL CD145806             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTAAAAAG                                                                                          ]
[-] EMBL CD202712             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTG                                                                                                 ]
[-] EMBL CD202639             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD202607             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCACCCTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD202580             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD145867             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD145778             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATCCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD145780             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD145860             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD145814             [TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]
[-] EMBL CD145798             [                     GATGAGTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAATACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTG                                                                                                 ]
[-] EMBL CD202651             [                     GATGAGTCACTATTGACGGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT                                                                                                   ]


>consensus_11261#1 TCTTCGGCAAGAACTTGAATAGATGAGTCACTATTGACAGTTACAATACCGCTACTGACG AAATACTTTTTTACATTCCCGTCATTTTCAGTGACTGCAACAATACCAGGCTTCAGACAA CCCACTGTGGGGACATGTTCAGGCAAAACACCAAAACGACCATTTAAAGTGGGGACGTCA ACTTGCTTTACGGCGACATTGTTGTAAAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTG AGTTCCCCACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTG T



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11261#0      TATTGGATTGTGATCGATGCAGGGTCCGGAGCATAACAGACTCAAGAAAAGATGTACAAT 60
consensus_11261#1      ------------------------------------------------------------
                                                                                   

consensus_11261#0      AATGTAGCTACAATTATTCAGTCTAACAAACTTGGTGATACAAATCATAAATTAACTTTG 120
consensus_11261#1      ------------------------------------------------------------
                                                                                   

consensus_11261#0      TTCCTGAAGAGCACGAGACATTTCTTCGAATGCTTCAACAGCGATTTGAGCCTCTGTCTT 180
consensus_11261#1      ------------------------------------------------------------
                                                                                   

consensus_11261#0      CCCCAGTTCTGTAGTAGCGCTCGACAACTCGGATTGTGCCCTAGACATTCCATCTTTAAC 240
consensus_11261#1      ------------------------------------------------------------
                                                                                   

consensus_11261#0      AGCATTTAGGTCCAACTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGA 300
consensus_11261#1      ----------------------------------TCTTCGGCAAGAACTTGAATAGATGA 26
                                                         **************************

consensus_11261#0      GTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATT 360
consensus_11261#1      GTCACTATTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATT 86
                       ************************************************************

consensus_11261#0      TTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAA 420
consensus_11261#1      TTCAGTGACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAA 146
                       ************************************************************

consensus_11261#0      AACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTA 480
consensus_11261#1      AACACCAAAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGTTGTA 206
                       ************************************************************

consensus_11261#0      AAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCGTCAAACACTGTGTCGAAGT 540
consensus_11261#1      AAAAGCTTGGCCTGATGAAGCGAAAGTAAGCTTGAGTTCCC-----CACCAAAACGACCA 261
                       ****************************************      ***     ***   

consensus_11261#0      TTGAATACTCCGTAGTTGACTTGGAAGTCGAAAA-ATGGCAACCTTTCTGAACAGCATTT 599
consensus_11261#1      TTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTGT-------------------- 301
                       ** **      *  **  *****     **   * ** *                     

consensus_11261#0      GGCGCGCTTTGATCAAGTGAAGCTGCTTCTTCGGCAAGAACTTGAATAGATGAGTCACTA 659
consensus_11261#1      ------------------------------------------------------------
                                                                                   

consensus_11261#0      TTGACAGTTACAATACCGCTACTGACGAAATACTTTTTTACATTCCCGTCATTTTCAGTG 719
consensus_11261#1      ------------------------------------------------------------
                                                                                   

consensus_11261#0      ACTGCAACAATACCAGGCTTCAGACAACCCACTGTGGGGACATGTTCAGGCAAAACACCA 779
consensus_11261#1      ------------------------------------------------------------
                                                                                   

consensus_11261#0      NAACGACCATTTAAAGTGGGGACGTCAACTTGCTTTACGGCGACATTG 827
consensus_11261#1      ------------------------------------------------
                                                                       




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)