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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11264#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 33 consensus length = 549 fasta sequence
[ACGNATGTGCAAAGTAG-CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT-TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACGGAGTCTTGGACCTACC-TATCGAAAATAAGCATGTTAATCCTCCAAATGAATTATAAATCGAAGCACCACTTTTCTGATGAGAATTCTGATTATT]
[+] EMBL CD127530 [ACGNATGTGCAAA TAGTAGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCATGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC ]
[+] EMBL CD127542 [ GNATGTGCAAA TAGTAGGTAGATAAAAATA GCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGCGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC ]
[+] EMBL CD180555 [ atAGTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGGGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATG ]
[+] EMBL CD178981 [ atAGTAG CGGTAGATAAAAATAGGCAGTTTAGCAACTGGCGAACGGCGTTTGCAGTTTTTCCT AGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[+] EMBL CD185965 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGCTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTG ]
[+] EMBL CD185921 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCTCATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTG ]
[+] EMBL CD178492 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGCTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCGCTATAACG ]
[+] EMBL CD178744 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACAGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAACTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[+] EMBL CD178594 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[+] EMBL CD178767 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[+] EMBL CD142930 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGGGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATG ]
[+] EMBL CD142926 [ GTAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGCTACATATCT TTCAACACTAGTCGGGATGAGCGTGGTTCTCATG ]
[+] EMBL CD141637 [ GTAG CGGTAGATAAAAATAGGCAGCTTAGCAATTGGCGAACGGCGTTTGCAGATTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGACATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTNATC ACAC ]
[-] EMBL CD142055 [ TAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGT GCAAAGAATCCTGA ]
[-] EMBL CD148751 [ TAG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGCTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGGTTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGA ]
[-] EMBL CD161121 [ AG CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCC ]
[-] EMBL CD188934 [ G CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAGGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGT ]
[-] EMBL CD189053 [ G CGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGA ]
[+] EMBL CD127157 [ TAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGCTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC ]
[+] EMBL AI976458 [ TAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACGGAGTCTTGGACCTACCATA CGAAAATAAGCATGTTAATCCTCCAAATGAATTATAAATCGAAGCACCACTTTTCTGATGAGAATTCTGATTATT]
[+] EMBL CD127486 [ TAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC ]
[+] EMBL CD127237 [ TAGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC ]
[-] EMBL CD127924 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGGAGAACCCCTGCTGTCCGAATGCACAAAAACGGAGTTTTGGACCTACC TA ]
[-] EMBL CD127261 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGGATAACCCCTGCTGTCCGAATGCAC AAAACGGAGTCTTGGACCTACt ]
[-] EMBL CD128073 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[-] EMBL CD127449 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGCCCGAATGCACTATAACG ]
[-] EMBL CD127753 [ AGGCAGGCAAGCAATCAGCTCGCGTCGATAGCATCTTTTCATTGTCACATAGGTAGTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[-] EMBL CD127184 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[-] EMBL CD127345 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACG ]
[-] EMBL CD127883 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTGTAACCCCTGCTGTCCGAATGCACTAAAACGGAGTCTTGGACCTACC TATggtc ]
[-] EMBL CD127870 [ AGGCAGTTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCTTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCCTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACAAGAACGGAGTCTTGGACCTACC Ttgt ]
[+] EMBL CD127739 [ tatttAGTTTACCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC ]
[+] EMBL CD127079 [ TTTACCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGCGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCT TTCAACACTACTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAACGGAGTCTTGGACCTACC TAT ]
consensusID : consensus_11264#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 447 fasta sequence
[GTAGAACAGGTAGGTAGATAAAAATA-GCAT-TTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTG-TTTGTGTGGCAAAG-AATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTG-ATG-AACTCTTTTTTAATAAAGACTATTTT-GGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC]
[+] EMBL CD128012 [GTAGAACAGGTAGGTAGATAAAAATA GCAT TTTAGCAATTGGCGAACGGCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTG TTTGTGTGGCAAAG AATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTG ATG AACTCTTTTTTAATAAAGACTATTTT GGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC]
[+] EMBL CD127971 [ ccaataGTAGGTAGATAAAAATG GTTTGTTTAGCAATTGGCGAACGGCGTCCGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTG TTTGTGTGGCAAAG AATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTG ATG AACTCTTTTTTAATAAAGACTATTTT GGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC]
[+] EMBL CD127408 [ GTAGGTAGATAAAAATATTCAG TTTAGCAATTGGCGAACGGCGTCTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTG TTTGTGTGGCAAAG AATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTG ATG AACTCTTTTTTAATAAAGACTATTTT GGAGCCAAAGTACCAGAAACCTCGTGTATAACCCCTGCTGTCCGAATGCACTATAAC]
[+] EMBL AA559413 [ GCGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCANACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTG TTTGTGTGGCAAAN AATCCTGATCTTTACATC ]
[+] EMBL CD165810 [ CGTTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTT AGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTCGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTG TTTGTGTGGCAAAG AATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCATG ATG AACTCTTTTTTAATAAAGACTATTTT GGAG ]
[+] EMBL BE505144 [ TTTGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAGTTTGGTCAAGAGTTTANCCAGGTTANCTCTGTTGGCATGCTGCAGAAGTGGACTTTTTGTTTCTCCCCACCGACTGAGTT ]
[+] EMBL CD185968 [ TTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTG TTTGTGTGGCAAAG AATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTG ATG AACTCTTTTTTAATAAAGACTATTTT GGAGCCAAAGTACCAGAAACCT ]
[+] EMBL AA559776 [ ATGCTGCAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTTGTGTGGCAAAGAAATCCTGATCTTTACATCCCAGTATACGATANAGTGCCTCGTGAATGAAACTCTTTTTTAATAAAGACTATTTTGGGAGCCCAAGTACCAGAAACCTCGTGTATAACCCCTGCT ]
consensusID : consensus_11264#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence
[GACCGACGGCTCACGGAACTTCTCACTTAAGCAAGAAAGTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTACAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTA]
[+] EMBL CD167420 [GACCGACGGCTCACGGAACTTCTCACTTAAGCAAGAAAGTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTACAGACGTGGACTTTTTGTTTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGAAAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGGCTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGTGCCTCGTGATGAACTCTTTTTTAATAAAGACTA]
consensusID : consensus_11264#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 185 fasta sequence
[GTCGTGGCTTTGCAGTTTTTCCTAACACATAACTGTACTCATTGGATCATCTGGTTCTGGCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGAGCTGACTTTGTTCCCACCGACTGAGTCTAACGCACATCAGTGAGCTTATGCTGTGAAATGAA]
[+] EMBL AA938783 [GTCGTGGCTTTGCAGTTTTTCCTAACACATAACTGTACTCATTGGATCATCTGGTTCTGGCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGAGCTGACTTTGTTCCCACCGACTGAGTCTAACGCACATCAGTGAGCTTATGCTGTGAAATGAA]
[+] EMBL SM0301 [GTCGTGGCTTTGCAGTTTTTCCTAACACATAACTGTACTCATTGGATCATCTGGTTCTGGCACTTAAGCAGAGAAAGTTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGAGCTGACTTTGTTCCCACCGACTGAGTCTAACGCACATCAGTGAGCTTATGCTGTGAAATGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11264#0 ACGNATGTGCAAAGTAGCGGTAGATAAAAATAGGCAGTTTAGCAATTGGCGAACGGCGTT 60
consensus_11264#2 ------------------------------------------------------------
consensus_11264#1 -------GTAGAACAGGTAGGTAGATAAAAATAGCATTTTAGCAATTGGCGAACGGCGTT 53
consensus_11264#3 -----------------------------------------GTCGTGGCTTTGCAGTTTT 19
consensus_11264#0 TGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAG 120
consensus_11264#2 -----------------GACCGACGGCTCACGGAACT---TCTCACTTAAGCA-AGAAAG 39
consensus_11264#1 TGCAGTTTTTCCTAAGCACATAACTACTCATTGCACTGGTTCTCACTTAAGCAGAGAAAG 113
consensus_11264#3 TCCTAACACATAACTGTACTCATTGGATCATCTGGTT--CTGGCACTTAAGCAGAGAAAG 77
*** * * ********** ******
consensus_11264#0 TTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGT 180
consensus_11264#2 TT-GGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTACAGACGTGGACTTTTTGT 98
consensus_11264#1 TTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGACGTGGACTTTTTGT 173
consensus_11264#3 TTTGGTCATGAGTTTATCCAGGTTATCTCTGTTGGCATGCTGCAGAGCTGA---CTTTGT 134
** ************************************** **** ** *****
consensus_11264#0 TTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGA 240
consensus_11264#2 TTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGA 158
consensus_11264#1 TTCTCCCCACCGACTGAGTTCTACAGCACATCAAGGTGGAACGTTTAATTGGCTTGTTGA 233
consensus_11264#3 T----CCCACCGACTGAGT-CTAACGCACATCA--GTGA---GCTTATGCTGTGAAATGA 184
* ************** *** ******** *** * *** * ***
consensus_11264#0 AAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGG 300
consensus_11264#2 AAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGG 218
consensus_11264#1 AAATTATCCGGTTACATATCTTTCAACACTAGTCGGGATGGGCGTGGTTCTCATGATTGG 293
consensus_11264#3 A----------------------------------------------------------- 185
*
consensus_11264#0 CTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGT 360
consensus_11264#2 CTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGT 278
consensus_11264#1 CTACAGCATTGTTTGTGTGGCAAAGAATCCTGATCTTTACATCCCAGTATACGATAGAGT 353
consensus_11264#3 ------------------------------------------------------------
consensus_11264#0 GCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTC 420
consensus_11264#2 GCCTCGTGATGAACTCTTTTTTAATAAAGACTA--------------------------- 311
consensus_11264#1 GCCTCGTGATGAACTCTTTTTTAATAAAGACTATTTTGGAGCCAAAGTACCAGAAACCTC 413
consensus_11264#3 ------------------------------------------------------------
consensus_11264#0 GTGTATAACCCCTGCTGTCCGAATGCACTATAACGGAGTCTTGGACCTACCTATCGAAAA 480
consensus_11264#2 ------------------------------------------------------------
consensus_11264#1 GTGTATAACCCCTGCTGTCCGAATGCACTATAAC-------------------------- 447
consensus_11264#3 ------------------------------------------------------------
consensus_11264#0 TAAGCATGTTAATCCTCCAAATGAATTATAAATCGAAGCACCACTTTTCTGATGAGAATT 540
consensus_11264#2 ------------------------------------------------------------
consensus_11264#1 ------------------------------------------------------------
consensus_11264#3 ------------------------------------------------------------
consensus_11264#0 CTGATTATT 549
consensus_11264#2 ---------
consensus_11264#1 ---------
consensus_11264#3 ---------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||