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Schistosoma mansoni
cluster # 11279 cluster # 11279       Sequences # 46       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11279#0 length = 1405 sequences # 34  
consensus_11279#1 length = 351 sequences # 5  
consensus_11279#2 length = 333 sequences # 3  
consensus_11279#3 length = 331 sequences # 3  
consensus_11279#4 length = 302 sequences # 1  

consensusID : consensus_11279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 34
consensus length = 1405
fasta sequence
                              [ACTAACCGCGATTTTGGGATGCTTCACAAAGTTTGGGCGTCCTTCTCTTATTATTTTACGTTAACATGTTTTTACGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTACCACTGTACAGTGATGCTATCGGAAAAAGTCCTAATAGTTATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC-CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTTAGGAGACGTGCAAAAGGGTTTACAAGAAATGAGACTTGGCGTCCATCTGACCAATGATAACCGCGAAGGATTACTGAGAATCAGCCAAATAATGTATGACGCTGGGTTTGCAGTGCAGGCTACCAATGAGCTTCGAGAGTGTCTCAGGCTTGATCAAGATGATAAGGCCTGTTTGAGCTTTTACAAAAAAGTAAATAAGGTTGCCAAGGCTATAACAGCCACTCAAGAGGCTTTGGAAGCCGAAAGGTACTCTGATTGCATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTCAAATCCTGAATATGCTAATCAAGCAAACATTAGCCTCTGTCACTGTCATGCAAAAGCTAAAAGTGTTGATGGAGTCCCGTATTGTGAATCTGTTGTTCAACATTATCCTGAAAGTACTGAATTCCAACTTTATCAAGCTGAAGCTTATATAAATGCTGACCGTTTTCAGGATGCCATTTCAACATACCAAAAAATATTGGAACATGAGTCAAATAATCAGAAAGCGAAAGAGGGCATGAAAAAGGCTCAAAAGCTTCTAAAAGCAAGCAACCGTCGTGATTACTATAAGATACTTGGGGTGCCCAAATCAGCTTCTAAAAAGGATATTTTGAAAGCCTATCGAAAAATGGCTGCTGAATATCATCCGGACAAATTTCAGGGCGAAGAAAGAGTGCAAGCTGAGAAAAAGTTCGTTGAAATTTCTGCAGCTAAGGAGGTCCTTACAGATGACGAGAAACGTACACAATTTGAAAATGGAATCGATCCGCTGGATTCCTGATTTTCCACCCTAGGCCAGGGTGACCGAG]

[+] EMBL CD187453             [ACTAACCGCGATTTTGGGATGCTTCACAAAGTTTGGGCGTCCTTCTCTTATTATTTTACGTTAACATGTTTTTACGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTACCACTGTACAGTGATGCTATCGGAAAAAGTCCTAATAGTTATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCNAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI975381             [                      TTCACAAAGTTTGGGCGTCCTTCTCTTATTATTTTACGTTAACATGTTTTTACGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTATCACTGTACAGTGATGCTATCGGAAAAAGTCCTAATAGTTATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGCCGT TTTTAAGCTAATAATGGGG AGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD170663             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170508             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAGATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170517             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGCAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170573             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGACTACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170579             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTGTTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170541             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACTTTTTCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAATTTTTGCTAGATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCCCCAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170589             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAACTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170598             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAGTACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170496             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170505             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170523             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170525             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170545             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAACCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170547             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170563             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170584             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170585             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170586             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170599             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170603             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170605             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170627             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170639             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170649             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGGTTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170660             [                                                                                                                                                                                                                                                                                          AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC CGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD181478             [                                                                                                                                                                                                                                                                                                                                                                                   TAGAAGATTATGAAAGT   CTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCAAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAGTTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGATTTGAGAGCAAGGTGTTATTTAAGCTTAGGAGACGTGCAAAAGGGTTTACAAGAAATGAGACTTGGCGTCCATCTGACCAATGATAACCGCGAAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD181339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAAAGGGTTTACAAGAAATGAGATTTGGCGTCCATCTGACCAATGATAACCGCGAAGGATTACTGAGAATCAGCCAAATAATGTATGACGCTGGGTTTGCAGTGCAGGCTACCAATGAGCTTCGAGAGTGTCTCAGGCTTGATCAAGATGATAAGGCCTGTTTGAGCTTTTACAAAAAAGTAAATAAGGTTGCCAAGGCTATAGCAGCCACTCAAGAGGCTTTGGAAGCCGAAAGGTACTCTGATTGCATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTC AATCCTGAATATGCTAATCAAGC AACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD201327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCGCGAAGGATTACTGAGAATCAGCCAAATAATGTATGACGCTGGGTTTGCAGTGCAGGCTACCAATGAGCTTCGAGAGTGTCTCAGGCTTGATCAAGATGATAAGGCCTGTTTGAGCTTTTACAAAAAAGTAAATAAGGTTGCCAAGGCTATAACAGCCACTCAAGAGGCTTTGGAAGCCGAAAGGTACTCTGATTGCATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTCAAATCCTGAATATGCTAATCAAGCAAACATTAGCCTCTGTCACTGTCATGCAAAAGCTAAAAGTGTTGATGGAGTCCCGTATTGTGAATCTGTTGTTCAACATTATCCTGAAAGTACTGAATTCCAACTTTATCAAGCTGAAGCTTATATAAATGCTGACCGTTTTCAGGATGCCATTTCAACATACCAAAAAATATTGGAACATG                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD144941             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGCGAAGGATTACTGAGAATCAGCCAAATAATGTATGACGCTGGGTTTGCAGTGCAGGCTACCAATGAGCTTCGAGAGTGTCTCAGGCTTGATCAAGATGATAAGGCCTGTTTGAGCTTTTACAAAAAAGTAAATAAGGTTGCCAAGGCTATAACAGCCACTCAAGAGGCTTTGGAAGCCGAAAGGTACTCTGATTGCATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTCAAATCCTGAATATGCTAATCAAGCAAACATTAGCCTCTGTCACTGTCATGCAAAAGCTAAAAGTGTTGATGGAGTCCCGTATTGTGAATCTGTTGTTCAACATTATCCTGAAAGTACTGAATTCCAACTTTATCAAGCTGAAGCTTATATAAATGCTGACCGTTTTCAGGATGCCATTTCAACATACCAAAAAATATTGGAACATGA                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI976502             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGGATTACTGAGAATCAGCCAAATAATGTATGACGCTGGGTTTGCAGTGCAGGCTACCAATGAGCTTCGAGAGTGTCTCAGGCTTGATCAAGATGATAAGGCCTGTTTGAGCTTTTACAAAAAAGTAAATAAGGTTGCCAAGGCTATAACAGCCACTCAAGAGGCTTTGGAAGCCGAAAGGTACTCTGATTGCATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTCAAATCCTGAATATGCTAATCAAGCAAACATTAGCCTCTGTCACTGTCATGCAAAAGCTAAAAGTGTTGATGGAGTCCCGTATTGTGAATCTGTTGTTCAACATTATCCTGAAAGTACTGAATTCCAACTTTATCAAGCTGAAGCTTATATAAATGCTGACCGTTTTCAGGATGCCATTTCAACATACCAAAAAATATTGGAACATGAGTCAAATAATCAGAAAGCGAAAGAGGGCATGAAAAAGGCTCAAAAGCTTCTAAAAGCAAGCAACCGTCGTGATTACTATAAGATACTTGGGGTGCCCAAATCAGCTTCTAAAAAGGATATTTTGA                                                                                                                                                                                                   ]
[-] EMBL CD167924             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTTACAAAAAAGTAAATAAGGTTGCCAAGGCTATAACAGCCACTCAAGAGGCTTTGGAAGCCGAAAGGTACTCTGATTGCATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTCAAATCCTGAATATGCTAATCAAGCAAACATTAGCCTCTGTCACTGTCATGCAAAAGCTAAAAGTGTTGATGGAGTCCCGTATTGTGAATCTGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD167923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGCTTATATAAATGCTGACCGTTTTCAGGATGCCATTTCAACATACCAAAAAATATTGGAACATGAGTCAAATAATCAGAAAGCGAAAGAGGGCATGAAAAGGGCTCAAAAGCTTTTAAAAGCAAGCAACCGTCGTGATTACTATAAGATACTTGGGGTGCCCAAATCAGCTTCTAAAAAGGATATTTTGAAAGCCTATCGAAAAATGGCTGCTGAATATCATCCGGACAAATTTCAGGGCGAAGAAAGAGTGCAAGCTGAGAAAAAGTTCGTTGAAATTTCTGCAGCTAAGGAGGTCCTTACAGATGACGAGAAACGTACACAATTTGAAAATGGAATCGATCCGCTGGATTCCTGATTTTCCACCCTAGGCCAGGGTGACCGAG]


>consensus_11279#0 ACTAACCGCGATTTTGGGATGCTTCACAAAGTTTGGGCGTCCTTCTCTTATTATTTTACG TTAACATGTTTTTACGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTG GAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTACCACTGTACAGT GATGCTATCGGAAAAAGTCCTAATAGTTATATGGCCCACTATAAAAGAGGCACAGCATAC ATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCTTTGGAGCTAAAT CCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTG ATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAA ATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAAC AGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCT GAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTTAGGAGACGTGCAAAAGGGT TTACAAGAAATGAGACTTGGCGTCCATCTGACCAATGATAACCGCGAAGGATTACTGAGA ATCAGCCAAATAATGTATGACGCTGGGTTTGCAGTGCAGGCTACCAATGAGCTTCGAGAG TGTCTCAGGCTTGATCAAGATGATAAGGCCTGTTTGAGCTTTTACAAAAAAGTAAATAAG GTTGCCAAGGCTATAACAGCCACTCAAGAGGCTTTGGAAGCCGAAAGGTACTCTGATTGC ATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTCAAATCCTGAATATGCTAATCAA GCAAACATTAGCCTCTGTCACTGTCATGCAAAAGCTAAAAGTGTTGATGGAGTCCCGTAT TGTGAATCTGTTGTTCAACATTATCCTGAAAGTACTGAATTCCAACTTTATCAAGCTGAA GCTTATATAAATGCTGACCGTTTTCAGGATGCCATTTCAACATACCAAAAAATATTGGAA CATGAGTCAAATAATCAGAAAGCGAAAGAGGGCATGAAAAAGGCTCAAAAGCTTCTAAAA GCAAGCAACCGTCGTGATTACTATAAGATACTTGGGGTGCCCAAATCAGCTTCTAAAAAG GATATTTTGAAAGCCTATCGAAAAATGGCTGCTGAATATCATCCGGACAAATTTCAGGGC GAAGAAAGAGTGCAAGCTGAGAAAAAGTTCGTTGAAATTTCTGCAGCTAAGGAGGTCCTT ACAGATGACGAGAAACGTACACAATTTGAAAATGGAATCGATCCGCTGGATTCCTGATTT TCCACCCTAGGCCAGGGTGACCGAG



consensusID : consensus_11279#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 351
fasta sequence
                              [CGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTATCACTGTACAGTGATGCTATCGTTATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCAT-GATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTA]

[-] EMBL CD164010             [CGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTATCACTGTACAGTGATGCTATCGTTATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTCTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCAT GATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTA]
[-] EMBL CD163873             [CGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTATCACTGTACAGTGATGCTATCGTTATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGGAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCAT GATACTGGCGTAAGCGCCAAAATATCTGAAATACACA     ]
[-] EMBL CD163794             [CGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTATCACTGTACAGTGATGCTATCGTTATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCAT GATACTGGCGTAAGCGCCAAAATATTTGAAATgcccg     ]
[+] EMBL CD170533             [                                                                                                                                                                                                AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCT AATCATGGAT CTGGCGGAAGCGCCCAA                     ]
[+] EMBL CD170509             [                                                                                                                                                                                                AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTACTGCAT GAAACTGCCGAAAGCGac                        ]


>consensus_11279#1 CGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTGGAGAAAGGGACTAG ACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTATCACTGTACAGTGATGCTATCGTTAT ATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCTCTT TTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGG GCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTG CTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTA



consensusID : consensus_11279#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 333
fasta sequence
                              [AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGA-TTATGAAAGTGTGGTACTGTTTTCAACTACAAAAATTTATTGCGTAGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT]

[+] EMBL CD170570             [AGAGCTTTGGAGCTAAATCCGGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAACACTTATGAAAGTGTGGTACTGTTTTCAACTACAAAAATTTATTGCGTAGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACCTCAATTGAGAGCAAGGTGTTATTTAAGCTT]
[+] EMBL CD170568             [AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGA TTATGAAAGTGTGGCACTGTTTTCAACTACAAAAATCTATTGCGTATCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGAGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT]
[+] EMBL CD170645             [AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGA TTATGAAAGTGTGGTACTGTTTTCAACTACAAAAATTTATTGCGTAGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT]


>consensus_11279#2 AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACACCGGGCGTATGTGAAG CTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGGTACTGTTTTCA ACTACAAAAATTTATTGCGTAGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGA AATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATA CAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCT ACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT



consensusID : consensus_11279#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 331
fasta sequence
                              [AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGTTAGTCATAACTTATCTTGATTAATTCGCAGGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT]

[+] EMBL CD170657             [AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGTTAGTCATAACTTATCTTGATTAATTCGCAGGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCCCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCCACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT]
[+] EMBL CD170634             [AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGTTAGTCATAACTTATCTTGATTAATTCGCAGGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATAGAAGCTATAGAAGATTATGAAAGTGTGCCAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT]
[+] EMBL CD170638             [AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGTTAGTCATAACTTATCTTGATTAATTCGCAGGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCTT]


>consensus_11279#3 AGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGTTAGTCATAACTTATCTTGATTAATT CGCAGGCAAGAAAACACCGGGCGTATGTGAAGCTAAGAATGGGGAAGCTGATGGAAGCTA TAGAAGATTATGAAAGTGTGCTAAATCATGATACTGGCGTAAGCGCCAAAATATCTGAAA TACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGAATACA GAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTAC GTGAATTGAGAGCAAGGTGTTATTTAAGCTT



consensusID : consensus_11279#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 302
fasta sequence
                              [AGAGCTTTGGAGCTAAATCCAGATTTATTCCTGGAAAACAAAACACCGGTCGTATGTGAACTTAAAAGGGGGGAACCGGAGGAAAATAAAAAAACCCACAAAAGGCCTCTCAAAATGAGGAGGCGGGGCGACGCCCCAAAATATCTAGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGATTACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGCTATTTAAGCTT]

[+] EMBL CD170571             [AGAGCTTTGGAGCTAAATCCAGATTTATTCCTGGAAAACAAAACACCGGTCGTATGTGAACTTAAAAGGGGGGAACCGGAGGAAAATAAAAAAACCCACAAAAGGCCTCTCAAAATGAGGAGGCGGGGCGACGCCCCAAAATATCTAGAAATACACAAACTACAAAATCAGTGGGAAGATGCTCGTAAATTGTTCGCGAACAGTGATTACAGAGAAGCTCTTACATTATTGGACAAATTAGTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGCTATTTAAGCTT]


>consensus_11279#4 AGAGCTTTGGAGCTAAATCCAGATTTATTCCTGGAAAACAAAACACCGGTCGTATGTGAA CTTAAAAGGGGGGAACCGGAGGAAAATAAAAAAACCCACAAAAGGCCTCTCAAAATGAGG AGGCGGGGCGACGCCCCAAAATATCTAGAAATACACAAACTACAAAATCAGTGGGAAGAT GCTCGTAAATTGTTCGCGAACAGTGATTACAGAGAAGCTCTTACATTATTGGACAAATTA GTAGAGTCTGTCGATTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGCTATTTAAGC TT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      ACTAACCGCGATTTTGGGATGCTTCACAAAGTTTGGGCGTCCTTCTCTTATTATTTTACG 60
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      TTAACATGTTTTTACGCTATCGCAACCCTATCAGTTAATGCTAGTGTGGAAGATATACTG 120
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      GAGAAAGGGACTAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTACCACTGTACAGT 180
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      GATGCTATCGGAAAAAGTCCTAATAGTTATATGGCCCACTATAAAAGAGGCACAGCATAC 240
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------AGAGCT-TTGGAGCTAAA 17
consensus_11279#4      ------------------------------------------AGAGCT-TTGGAGCTAAA 17
consensus_11279#3      ------------------------------------------AGAGCT-TTGGAGCTAAA 17
consensus_11279#0      ATCGCACTATCTAATTGTAGGATGTCTCTTTTGGATTTTAATAGAGCT-TTGGAGCTAAA 299
consensus_11279#1      --------------------------------------------CGCTATCGCAACCCTA 16
                                                                    *** * * * *   *

consensus_11279#2      TCCAGATTTCATTCCTGCAAG--------------------------------AAAACAC 45
consensus_11279#4      TCCAGATTT-ATTCCTGGAAAAC------------------------------AAAACAC 46
consensus_11279#3      TCCAGATTTCATTCCTGTTAGTCATAACTTATCTTGATTAATTCGCAGGCAAGAAAACAC 77
consensus_11279#0      TCCAGATTTCATTCCTGCAAG--------------------------------AAAACAC 327
consensus_11279#1      TC-AGTTAATGCTAGTGTGGAAGATATACT------------------GGAGAAAGGGAC 57
                       ** ** *     *  **                                    **   **

consensus_11279#2      CGGGCGTATGTGAAGC--TAAGAATGGGGAAGCTGATGGAAGCTATAGAAG----ATTAT 99
consensus_11279#4      CGGTCGTATGTGAACT--TAAAAGGGGGGAACCGGAGGAAA---ATAAAAA----A---- 93
consensus_11279#3      CGGGCGTATGTGAAGC--TAAGAATGGGGAAGCTGATGGAAGCTATAGAAG----A---- 127
consensus_11279#0      CGGGCGTATGTGAAGC--TAAGAATGGGGAAGCTGATGGAAGCTATAGAAG----A---- 377
consensus_11279#1      TAGACTTTTAGCATCCGGTAAATTTGAGGAAGCTCTATCACTGTACAGTGATGCTATCGT 117
                         * * * *   *     ***    * **** *      *    * *        *    

consensus_11279#2      GAAAGTGTGGTACTGTTTTCAACTACAAAAATTTATTGCGTAGCTAAATC-ATGATA-CT 157
consensus_11279#4      --------------------ACCCACAAAAG------GCCTCTCAAAATG-AGGAGG-CG 125
consensus_11279#3      ----------------------TTATGAAAG--------TGTGCTAAATC-ATGATA-CT 155
consensus_11279#0      ----------------------TTATGAAAG--------TGTGCTAAATC-ATGATA-CT 405
consensus_11279#1      TATATGGCCCACTATAAAAGAGGCACAGCATACATCGCACTATCTAATTGTAGGATGTCT 177
                                               *    *             * ** *  * **   * 

consensus_11279#2      GGCGTAAGCGCCAAAATATCT---GAAATACA-CAAACTACAAAATCAGTGGGAAGATGC 213
consensus_11279#4      GGGCGACGCCCCAAAATATCTA--GAAATACA-CAAACTACAAAATCAGTGGGAAGATGC 182
consensus_11279#3      GGCGTAAGCGCCAAAATATCT---GAAATACA-CAAACTACAAAATCAGTGGGAAGATGC 211
consensus_11279#0      GGCGTAAGCGCCAAAATATCT---GAAATACA-CAAACTACAAAATCAGTGGGAAGATGC 461
consensus_11279#1      CTTTTGGATTTTAATAGAGCTTTGGAGCTAAATCCAGATTTCATTCCTGCAAGAAAACAC 237
                                   ** * * **   **  ** * * *  *   *   * *   *** *  *

consensus_11279#2      TCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGT 273
consensus_11279#4      TCGTAAATTGTTCGCGAACAGTGATTACAGAGAAGCTCTTACATTATTGGACAAATTAGT 242
consensus_11279#3      TCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGT 271
consensus_11279#0      TCGTAAATTGTTCGCGAACAGTGAATACAGAGAAGCTCTTACATTATTGGACAAATTAGT 521
consensus_11279#1      C----GGGCGTATGTGAA-GCTAAGAATGGGGAAGCTGATGGAAGCTATAGAAGATTATG 292
                                **  * ***   * *  *  * ******  *  *   *     * ****  

consensus_11279#2      AGAGTCTGTCGA-TTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCT 332
consensus_11279#4      AGAGTCTGTCGA-TTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGCTATTTAAGCT 301
consensus_11279#3      AGAGTCTGTCGA-TTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCT 330
consensus_11279#0      AGAGTCTGTCGA-TTATGCTGAGGAGCTACGTGAATTGAGAGCAAGGTGTTATTTAAGCT 580
consensus_11279#1      AAAGTGTGCTAAATCATGATACTGGCGTAAGCG--CCAAAATATCTGAAATACACAAACT 350
                       * *** **   * * *** *   *   ** * *     * *     *   **   ** **

consensus_11279#2      T----------------------------------------------------------- 333
consensus_11279#4      T----------------------------------------------------------- 302
consensus_11279#3      T----------------------------------------------------------- 331
consensus_11279#0      TAGGAGACGTGCAAAAGGGTTTACAAGAAATGAGACTTGGCGTCCATCTGACCAATGATA 640
consensus_11279#1      A----------------------------------------------------------- 351
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      ACCGCGAAGGATTACTGAGAATCAGCCAAATAATGTATGACGCTGGGTTTGCAGTGCAGG 700
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      CTACCAATGAGCTTCGAGAGTGTCTCAGGCTTGATCAAGATGATAAGGCCTGTTTGAGCT 760
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      TTTACAAAAAAGTAAATAAGGTTGCCAAGGCTATAACAGCCACTCAAGAGGCTTTGGAAG 820
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      CCGAAAGGTACTCTGATTGCATCAAGAAAGCAGCAGAGATAGTCAAACTCGAGTCTTCAA 880
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      ATCCTGAATATGCTAATCAAGCAAACATTAGCCTCTGTCACTGTCATGCAAAAGCTAAAA 940
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      GTGTTGATGGAGTCCCGTATTGTGAATCTGTTGTTCAACATTATCCTGAAAGTACTGAAT 1000
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      TCCAACTTTATCAAGCTGAAGCTTATATAAATGCTGACCGTTTTCAGGATGCCATTTCAA 1060
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      CATACCAAAAAATATTGGAACATGAGTCAAATAATCAGAAAGCGAAAGAGGGCATGAAAA 1120
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      AGGCTCAAAAGCTTCTAAAAGCAAGCAACCGTCGTGATTACTATAAGATACTTGGGGTGC 1180
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      CCAAATCAGCTTCTAAAAAGGATATTTTGAAAGCCTATCGAAAAATGGCTGCTGAATATC 1240
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      ATCCGGACAAATTTCAGGGCGAAGAAAGAGTGCAAGCTGAGAAAAAGTTCGTTGAAATTT 1300
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ------------------------------------------------------------
consensus_11279#4      ------------------------------------------------------------
consensus_11279#3      ------------------------------------------------------------
consensus_11279#0      CTGCAGCTAAGGAGGTCCTTACAGATGACGAGAAACGTACACAATTTGAAAATGGAATCG 1360
consensus_11279#1      ------------------------------------------------------------
                                                                                   

consensus_11279#2      ---------------------------------------------
consensus_11279#4      ---------------------------------------------
consensus_11279#3      ---------------------------------------------
consensus_11279#0      ATCCGCTGGATTCCTGATTTTCCACCCTAGGCCAGGGTGACCGAG 1405
consensus_11279#1      ---------------------------------------------
                                                                    




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)