These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11282#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 627 fasta sequence [TCGAGGGCCANAATTCGGCACGAGGGGTGGCAG-GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGTCATATCGCTAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA] [+] EMBL CD080421 [TCGAGGGCCANAATTCGGCACGAGGGGTGGCAGNGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG ] [+] EMBL CD081817 [ gaGGCCTTAATTCGGCACCAG GGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATTAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG ] [+] EMBL CD080003 [ ccaagnaAATTCGGCACGAGANNNGGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG ] [-] EMBL CD074335 [ TGGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ] [-] EMBL CD074513 [ TGGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ] [-] EMBL CD075386 [ CAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATTAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ] [-] EMBL CD075547 [ CAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATTAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAGTAGATT ] [-] EMBL CD183322 [ CAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGA ] [-] EMBL CD183678 [ CAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGA ] [-] EMBL CD075415 [ TTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ] [-] EMBL BF936114 [ AGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGTCATATCGCTAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA] consensusID : consensus_11282#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 532 fasta sequence [GAGCCATTAATTCGGCACGAGGATTTCCANAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGAT-GGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA-GATTAATTCACAAG-AACTTAA-GAACTAAATAGGGTA-GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG] [+] EMBL CD081591 [GAGCCATTAATTCGGCACGAGGATTTCCANAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGAT GGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG] [-] EMBL CD194094 [ CAGG TTGATGGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATNGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGT ] [-] EMBL CD135290 [ GAT GGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAA ] [-] EMBL CD136577 [ atacgGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGT ] [+] EMBL CD194086 [ TGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTNGGACTGTTTTCAATTTCGTat ] [-] EMBL CD136562 [ ATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGT ] [-] EMBL CD135073 [ GGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGACTATACCATTA GATTAATTCACAAG AACTTAA GAA ] [-] EMBL CD087915 [ CAACCCGTCCAGACATCNCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGG ] [+] EMBL SM7681 [ CCGTCCAGACATCCCCACCTTCAGATCNATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGGATTAATTCACAAGNAACTTAAGGAACTAAATAGGGTAGGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG] [-] EMBL CD087873 [ ATCCNCACTATCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCTCAAG AACTTAA GAACTAAATAGG ] [+] EMBL CD193854 [ GAACTTATTCGACGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AGCTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTG ] consensusID : consensus_11282#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 445 fasta sequence [ATTGATGAAGGGTGTAGCTATTTGTTTATCCTCATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC-CCGTCCAGACA-TCCCCACC-TTCAGAT-CAATATCAG-TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGC-AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG] [+] EMBL CD189444 [ATTGATGAAGGGTGTAGCTATTTGTTTATCCTCATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG] [+] EMBL CD178971 [ TGTTTATCCTCATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCA ] [-] EMBL CD188310 [ CATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCC ] [+] EMBL CD133197 [ CTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACTAAGTCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG] [-] EMBL CD097450 [ TTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAGGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAA ] [+] EMBL CD201419 [ TTGTGGCAGGAAGTCCATCCACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGAC ] [-] EMBL BG932396 [ AGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTcccc ] [-] EMBL BG932379 [ TCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCGCAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCtt ] [+] EMBL CD133114 [ CCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCTTCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGCTCAccc ] [-] EMBL CD186499 [ ATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGACCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGA ] [+] EMBL CD170140 [ TCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATA ] [+] EMBL CD170142 [ TCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCCGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATA ] [+] EMBL CD136612 [ TTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACGGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAAACCTC AAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAA ] [+] EMBL CD177749 [ TTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTAGACAGCCAGGTTTGATGGG ] [+] EMBL CD177714 [ TTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGC ] [-] EMBL BG931661 [ GCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCTAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCTCAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGAC ] [-] EMBL CD072462 [ TAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCG ] [-] EMBL CD087830 [ AACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAACCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TC ] [+] EMBL CD062843 [ TGATGGGACAGTTGGCAGCTACAGCCGGGGGTGTGGCTATTGATTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACACCGTCCAAACATTCCCCACCATTCAGGTGCAATATCAGCTCTCCATGTCAATACCAAGTCGATG ] [+] EMBL CD136534 [ GGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGCCAATACCAAGCCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG] [+] EMBL CD193915 [ GGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCA ] [-] EMBL CD136334 [ GTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTA ] [-] EMBL CD200743 [ TTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATG ] [-] EMBL CD192603 [ TTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATG ] consensusID : consensus_11282#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 234 fasta sequence [AGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCTTCC] [-] EMBL BG932446 [AGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCTTCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11282#0 ---------------------TCGAGGGCCANAATTCGGCACGAGGGGTGGCAGGAAGTC 39 consensus_11282#1 ------------------------------------------------GAGCCATTAATT 12 consensus_11282#2 ATTGATGAAGGGTGTAGCTATTTGTTTATCCTCATCTGTGACCTT--GTGGCAGGAAGTC 58 consensus_11282#3 ------------------------------------------------------------ consensus_11282#0 CATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAA 99 consensus_11282#1 CGGCACGAGGATTTCCANAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAA 72 consensus_11282#2 CATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAA 118 consensus_11282#3 ----------------------------------------------AGCTACAGCCGGGG 14 * *** * consensus_11282#0 GAGTTTCGTCGCGTCCACGTGCAAGTT-TGCCAGCTC--GTGCACCACCATCTGCTGTTG 156 consensus_11282#1 GAGTTTCGTCGCGTCCACGTGCAAGTT-TGCCAGCTC--GTGCACCACCATCTGCTGTTG 129 consensus_11282#2 GAGTTTCGTCGCGTCCACGTGCAAGTT-TGCCAGCTC--GTGCACCACCATCTGCTGTTG 175 consensus_11282#3 GTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTG 74 * ** * ** ** ** ** ** * * * * *** ** ** * ** consensus_11282#0 CACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 216 consensus_11282#1 CACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 189 consensus_11282#2 CACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 235 consensus_11282#3 GTAGCAATCCTGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 134 *** ************************************************* consensus_11282#0 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 276 consensus_11282#1 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 249 consensus_11282#2 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 295 consensus_11282#3 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 194 ************************************************************ consensus_11282#0 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTC 336 consensus_11282#1 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTC 309 consensus_11282#2 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTC 355 consensus_11282#3 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCTTCC-------------------- 234 ************************************ ** consensus_11282#0 CATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTG 396 consensus_11282#1 CATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTG 369 consensus_11282#2 CATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTG 415 consensus_11282#3 ------------------------------------------------------------ consensus_11282#0 CTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATT 456 consensus_11282#1 CTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATT 429 consensus_11282#2 CTTGTAGTGGCTTCTCTGAAGCTCTAAAAG------------------------------ 445 consensus_11282#3 ------------------------------------------------------------ consensus_11282#0 AGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGT 516 consensus_11282#1 AGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGT 489 consensus_11282#2 ------------------------------------------------------------ consensus_11282#3 ------------------------------------------------------------ consensus_11282#0 TTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGTCATATCGCTAAAAAAA 576 consensus_11282#1 TTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG----------------- 532 consensus_11282#2 ------------------------------------------------------------ consensus_11282#3 ------------------------------------------------------------ consensus_11282#0 AAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA 627 consensus_11282#1 --------------------------------------------------- consensus_11282#2 --------------------------------------------------- consensus_11282#3 --------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||