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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11309#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 45 consensus length = 702 fasta sequence
[GAGATCACTTTATCATCAAAAATTATTGGTACAATCATTAGACATGCATAAAAAACAAGTGTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG-CGTGTATGACAAACTATCAT-CAAAATTAAAAATGAAAATACAAGTT-TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG-TGAAT-TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT-GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT-TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTTCAACTTCGTAATCATAAACTGCGTAACACCC-TTTACCTTCATCCATCATTTTTAATAAAATATCCTTGAAACTATGATACGTTTCCGTTCTATCAGCTCGAC]
[+] EMBL AI976986 [GAGATCACTTTATCATCAAAAATTATTGGTACAATCATTAGACATGCATAAAAAACAAGTGTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAAAAATTTAACAATTAAGGCTTTTATAAACCAGGTGGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTTTACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTNTGAAGCCCTT ]
[-] EMBL AA864164 [ ATCACTTTATCATCAAAAATTATTGGTACAATCATTAGACATCGATAAAAAACAAGTGTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAG ATTAAAAAAAA ]
[+] EMBL CD135668 [ TATCATCAAAAATTATTGGTACAATCATTAGACATGCATAAAAAACAAGTGTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTTCAACTTCGTAATCATAAACTGCGTAACACCCTTTTACC TCATCCATCATTNTTAATA ]
[+] EMBL CD135722 [ TATCATCAAAAATTATTGGTACAATCATTAGACATGCATAAAAAACAAGTGTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCGAACTCGCTTTCAATACACATTN TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAG ]
[+] EMBL CD145024 [ TCATCAAAAATTATTGGTACAATCATTAGACATGCATAAAAAACAAGTGTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTTTAACACCCACCAAACTCGCTTTAAATA ]
[-] EMBL CD140917 [ TAAAAAACAAGTGTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAG ]
[+] EMBL CD135893 [ TACGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGATACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135847 [ GAGTAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAGATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135818 [ GAATAAATAAGGTTCAATCAAGTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135826 [ GAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD138890 [ GAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD182658 [ GAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAGCTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAGGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATANCACTAAGATGAACAGTTATGAAGCCCTTT ]
[+] EMBL CD135908 [ GAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCA ]
[+] EMBL CD193300 [ GAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAGCATACAACTCAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135823 [ GAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGCACACTGGATCAAAATATTGAAAAACTGG CGTGTGTGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD193297 [ cAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACCAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAGATGAGAAAATCCATG TGAAT TTCCAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135922 [ ttCGATTGGGGTTTATTAT GAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACACGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[-] EMBL CD135692 [ CTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAGCCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAGCACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTTCAAC ]
[+] EMBL CD135910 [ taGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCA ]
[+] EMBL CD194798 [ GTATACATATATTATAACCGAACACTGCATCAAAATATTGAAAAACTGGTCGTGTATGACAAACTATCATACAAAATTAAAAATGAAAATACAAGTTAAGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGACAAAATCCATGACGAATATTGCAAACATACAACAAATATGAACAGGAATGAAGCCCTTTTAGCTCATTACTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCACGGAAGGTACTTTTCCTTCAACTTCGTAATCATAAACTGCGTAACACCC TTTACCTTCATCCATCATTTTTAATAAAATATCCTTGAAACTATGATACGTGTCC ]
[-] EMBL CD194586 [ TATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCTACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTTCAACTTCGTAATCATAAACTGCGTAACACCC TTTACCTTCATCCATCATTTTTAATAAAATATCCTTGAAACTATGATACGTTT ]
[+] EMBL CD135883 [ TACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCATATGAGAAAATCCATG TGAAT TTCCAAACATACAAGTCATATGAACATTGGTGAAGTCCTATT Gt ]
[+] EMBL BG932620 [ CATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTTCAACTTCGTAATCATAAACTGCGTAACACCCct ]
[-] EMBL CD187659 [ TATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CACAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCGCTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCATAGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCT ]
[+] EMBL CD135846 [ ATTATAAGCGTACACTGGATCGAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAGTTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTGTATGAAAATGCACTAACCCTCAAATGAGGGAAACCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCG ]
[+] EMBL CD135867 [ ATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT Ga ]
[+] EMBL CD135829 [ ATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135814 [ ATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135848 [ ATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135889 [ ATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[+] EMBL CD135852 [ ATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGGAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GC ]
[-] EMBL CD135905 [ TTATAAGCGTACACTGGATCAAAATATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACG ]
[+] EMBL CD182180 [ ATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTC ]
[+] EMBL CD182060 [ ATTGAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTC GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTC ]
[+] EMBL CD182000 [ GAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTC ]
[+] EMBL CD181939 [ GAAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTTNTG NGCAGCATATATCATTC ]
[-] EMBL CD138615 [ AAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCG ]
[-] EMBL CD138518 [ AAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCG ]
[-] EMBL CD138416 [ AAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCG ]
[-] EMBL CD138428 [ AAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCG ]
[-] EMBL CD138505 [ AAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCACTAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAGCATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCG ]
[-] EMBL CD093241 [ AAAAACTGG CGTGTATGACAAACTATCAT CAAAATTAAAAATGAAAATACAAGTT TGACGAGTGAGAAGTCTCTGAAAATGCAATAACCCGCAAATGAGAAAATCCATG TGAAT TTCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCGACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCG ]
[-] EMBL CD187738 [ GAACAGTTATGAAGCCCTTTT GCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTTCAACTTCGTAATCATAAACTGCGTAACACCC TTTACCTTCATCCATCATTTTTAATAAAATATCCTTGAAACTATGATACGTTTC ]
[-] EMBL CD138438 [ CTTTT GCGCA TTCTTCCTCCTCGATNTCGTCCACATCATTTGCCTCAACTTCGCGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCGTATATCATTCG ]
[-] EMBL BG931601 [ CGCATTTCTTCCTCCCCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACTCGCTTTCAATACACATTT TGAAGCAGCATATATCATTCGCTTTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTTCAACTTCGTAATCATAAACTGCGTAACACCC TTTACCTTCATCCATCATTTTTAATAAAATATCCTTGAAACTATGATACGTTTCCGTTCTATCAGCTCGAC]
consensusID : consensus_11309#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 416 fasta sequence
[GTATTGTGATTGATGGGGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGTATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTATCATCAAAATTAAAAATGAAAATACAAGTTTGACGAGTGAGAAGTCTCTGAAAATGCACTCTAAGATGAACAGTTATGAAGCCCTTTTGCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACCCGCTTTCAATACACATTTTGAAGCAGCATATATCATTCG]
[+] EMBL BG932386 [GTATTGTGATTGATGGGGGGAGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGTATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTATCATCAAAATTAAAAATGAAAATACAAGTTTGACGAGTGAGAAGTCTCTGAAAATGCACT ]
[-] EMBL BG932450 [ AGTTCAAGTCTTCAGAAATTTAACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGC ]
[+] EMBL CD193319 [ CAAGAATTAGAATAAATAAGGTTCAATCAATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTATCGTCAAAATTAAAAATGAAAATACAAGTTTGACGAGTGAGAAGTCTCTGAACATGCAAACTAAGATGAACAGTTATGAACCCCTTTTGC ]
[+] EMBL CD182063 [ GAAAAACTGGCGTGTATGACAAACTATCATCAAAATTAAAAATGAAAATACAAGTTTGACGAGTGAGAAGTCTCTGAAAATGCACTCTCCGGTGAACGGTTATGACGCCCTTTTGCGCATTTCTTCCTCCT ]
[-] EMBL CD164212 [ AAAAACTGGCGTGTATGACAAACTATCATCAAAATTAAAAATGAAAATACAAGTTTGACGAGTGAGAAGTCTCTGAAAATGCAAACTAAGATGAACAGTTAAGAAGCCCTTTCGCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCACGTCTAACACCCACCAAACCCGCTTTCAATACACATTTTGAAGCAGCATATATCATTCG]
consensusID : consensus_11309#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 263 fasta sequence
[AAAGGCCGGGCAATTAATCATAAATAATATATGCAATGCACAAGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTATCATCAAAATTAAAAATGAAAATACAAGTTAGACGAGTGAGAAGTCTCTGAACATGCACTAACCCGCAAATGAGAAAATCCATGTGAATTGCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTTGC]
[+] EMBL CD193329 [AAAGGCCGGGCAATTAATCATAAATAATATATGCAATGCACAAGGCGATGGGGCTGAATTCTGGAGTATACATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTATCATCAAAATTAAAAATGAAAATACAAGTTAGACGAGTGAGAAGTCTCTGAACATGCACTAACCCGCAAATGAGAAAATCCATGTGAATTGCGAAACATACAACTAAGATGAACAGTTATGAAGCCCTTTTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11309#0 GAGATCACTTTATCATCAAAAATTATTGGTACAATCATTAGACATGCATAAAAAACAAGT 60
consensus_11309#1 ------------------------------------------------------------
consensus_11309#2 ------------------------------------------------------------
consensus_11309#0 GTCAGCTTTAATAGTAACATGATGGTATTAAACCTTGGGAGTTCAAGTCTTCAGAAATTT 120
consensus_11309#1 -------------------GTATTGTGATTGATGGGGGGAGTTCAAGTCTTCAGAAATTT 41
consensus_11309#2 ------------------------------------------------------------
consensus_11309#0 AACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATC 180
consensus_11309#1 AACAATTAAGGCTTTTATAAACCAGGTAGGAGCAAGAATTAGAATAAATAAGGTTCAATC 101
consensus_11309#2 -------------------------------------------------AAAGGCCGGGC 11
** * * *
consensus_11309#0 AATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGAATTCTGGAGTATAC 240
consensus_11309#1 AATTAAGCATAAATAATATTTGTAATGCACAGGGCGATGGGGCTGTATTCTGGAGTATAC 161
consensus_11309#2 AATTAATCATAAATAATATATGCAATGCACAAGGCGATGGGGCTGAATTCTGGAGTATAC 71
****** ************ ** ******** ************* **************
consensus_11309#0 ATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTAT 300
consensus_11309#1 ATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTAT 221
consensus_11309#2 ATGTATTATAAGCGTACACTGGATCAAAATATTGAAAAACTGGCGTGTATGACAAACTAT 131
************************************************************
consensus_11309#0 CATCAAAATTAAAAATGAAAATACAAGTTTGACGAGTGAGAAGTCTCTGAAAATGCACTA 360
consensus_11309#1 CATCAAAATTAAAAATGAAAATACAAGTTTGACGAGTGAGAAGTCTCTGAAAATGCACT- 280
consensus_11309#2 CATCAAAATTAAAAATGAAAATACAAGTTAGACGAGTGAGAAGTCTCTGAACATGCACTA 191
***************************** ********************* *******
consensus_11309#0 ACCCGCAAATGAGAAAATCCATGTGAATTTCGAAACATACAACTAAGATGAACAGTTATG 420
consensus_11309#1 ------------------------------------------CTAAGATGAACAGTTATG 298
consensus_11309#2 ACCCGCAAATGAGAAAATCCATGTGAATTGCGAAACATACAACTAAGATGAACAGTTATG 251
******************
consensus_11309#0 AAGCCCTTTTGCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCAC 480
consensus_11309#1 AAGCCCTTTTGCGCATTTCTTCCTCCTCGATTTCGTCCACATCATTTGCCTCAACTTCAC 358
consensus_11309#2 AAGCCCTTTTGC------------------------------------------------ 263
************
consensus_11309#0 GTCTAACACCCACCAAACTCGCTTTCAATACACATTTTGAAGCAGCATATATCATTCGCT 540
consensus_11309#1 GTCTAACACCCACCAAACCCGCTTTCAATACACATTTTGAAGCAGCATATATCATTCG-- 416
consensus_11309#2 ------------------------------------------------------------
consensus_11309#0 TTCTAACATCCAGCGTAGACGGAACCCATGAGACAAATATCAGGGAAGGTACTTTTCCTT 600
consensus_11309#1 ------------------------------------------------------------
consensus_11309#2 ------------------------------------------------------------
consensus_11309#0 CAACTTCGTAATCATAAACTGCGTAACACCCTTTACCTTCATCCATCATTTTTAATAAAA 660
consensus_11309#1 ------------------------------------------------------------
consensus_11309#2 ------------------------------------------------------------
consensus_11309#0 TATCCTTGAAACTATGATACGTTTCCGTTCTATCAGCTCGAC 702
consensus_11309#1 ------------------------------------------
consensus_11309#2 ------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||