These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11373#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 57 consensus length = 422 fasta sequence [TAAATTACGAACTTGGGCGTGTAGATATGGTGAAGGCCACAGAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC--AAAAAAAGAAAGTTTTTCCA-AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT-GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA-TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGTAAA] [+] EMBL CD094935 [ AATTACGAACTTGGGCGTGTAGATATGGTGAAGGCCACAGAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAA ] [+] EMBL CD136529 [taatacggGAACTTGGGCGTGTAGATATGGTGAAGGCCACAGAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGGGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTG TCGA ] [+] EMBL CD110983 [ CGTGTAGATATGGTGAAGGCCACAGAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTA ] [-] EMBL CD187146 [ CGTGTAGATATGGTGAAGGCCACAGAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCC ] [+] EMBL CD188336 [ TAT GTGAAGGCCACAGAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAA ] [+] EMBL CD144343 [ GAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGA ] [+] EMBL CD144372 [ GAGACTGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAAT ] [+] EMBL CD147699 [ ACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAG ] [+] EMBL CD147476 [ ACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAA ] [-] EMBL CD097308 [ CGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGAGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGAAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGT ] [-] EMBL CD062821 [ GCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACGGTGGTGTTGTTCGAGCTCGATTCAAA AAAA TTTACCGGCANCC ] [+] EMBL CD113241 [ GCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTAT ] [+] EMBL CD138716 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGTA ] [+] EMBL CD138745 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTTATGTTGTATCCTTCACGAGTTTTATGGAGTA ] [+] EMBL CD138742 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAG TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTACAATGAAGTA ] [+] EMBL CD138756 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTTTTATGAAGTt ] [+] EMBL CD138758 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACCTTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGTA ] [+] EMBL CD138713 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGAACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGTA ] [+] EMBL CD138155 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATGT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGTA ] [+] EMBL CD138721 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAGGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAATGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATTATGAAGTA ] [+] EMBL CD138737 [ CAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATTATGAAGTAAA] [-] EMBL CD138717 [ AAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGTAA ] [-] EMBL CD138746 [ AAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATCGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAGGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAGTAA ] [+] EMBL CD200411 [ AAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTC AACATAA TTT ] [+] EMBL CD113025 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTAC ] [+] EMBL CD144381 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTAC ] [+] EMBL CD144324 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA ] [+] EMBL CD144357 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATA ] [+] EMBL CD144366 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAAT ] [+] EMBL CD113021 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGA ] [+] EMBL CD113015 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGg ] [+] EMBL CD150611 [ CACAAGCTAAGCCTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAAGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGA ] [+] EMBL CD144369 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGA ] [+] EMBL CD144378 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGCTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGA ] [+] EMBL CD144358 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCCGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGA ] [+] EMBL CD150622 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGT AAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTCACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGA ] [+] EMBL CD113018 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTT TAT GGGGA ] [-] EMBL CD138344 [ ACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GG ] [-] EMBL CD112973 [ ACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGGGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTCA AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAA ] [-] EMBL CD112971 [ ACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTCA AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAA ] [-] EMBL CD112986 [ ACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA ] [-] EMBL CD136558 [ AAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTNTACTGCGAATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCT ] [+] EMBL CD136521 [ AAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGGAGTGGAGAGGAAATCTACGCATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAATTTTACGGNCATCCGC ] [-] EMBL CD132287 [ GACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCC ] [+] EMBL CD136518 [ ACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTA ] [-] EMBL CD154879 [ CTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTCAAAAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAC GGGGAAAAAT ] [-] EMBL CD144207 [ ACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTNTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCtc ] [+] EMBL CD169988 [ TTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTAC ] [+] EMBL CD191355 [ AGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAA ] [+] EMBL CD191428 [ GAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCANAGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAA ] [+] EMBL CD136488 [ GACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTCTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGC ] [+] EMBL CD136503 [ AAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTCTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGC ] [+] EMBL CD146060 [ AATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTCA AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAA ] [-] EMBL CD161475 [ ACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCA ] [-] EMBL CD136584 [ GTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCT ] [-] EMBL CD134472 [ ACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTC AAAAAGAGAGAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATAT GGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGCTA ] [+] EMBL CD136472 [ AAAAAAGAAAGTTTTTCCA AGAAGGCAAAAGCCAACGAAAATAAGAGTTATATGGGGGAAAAATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAA TTTACCGGCATCCGC ] consensusID : consensus_11373#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 331 fasta sequence [CTGCTTAGGCGGCCGCGGAAACTCCTATTCCAGCCCCAAACACGGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAATGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGTTTTTCTACAGATCTCTACCTGGGGAAACGCTGTGTGTATGTTTATACAGCCCAAAAAAAAGAAAGTTTTTCCAAGAAGGCAAAAGCCAACGAAAATAAGAGTTATATGGGGAAAAATCATGCGTCCGGTGGCGCTGGTTGCGCTTGAAT] [+] EMBL CD144327 [CTGCTTAGGCGGCCGCGGAAACTCCTATTCCAGCCCCAAACACGGACGGTGCCAAGCACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAATGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGTTTTTCTACAGATCTCTACCTGGGGAAACGCTGTGTGTATGTTTATACAGCCC ] [+] EMBL CD144333 [ CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTACCGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTGGAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTCAAAAAAAAGAAAGTTTTTCCAAGAAGGCAAAAGCCAACGAAAATAAGAGTTATATGGGGAAAAATCATGCGTCCGGTGGCGCTGGTTGCGCTTGAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11373#0 TAAATTACGAACTTGGGCGTGTAGA-TATGGTGAAGGCCACAGAGACTGACGGTGCCAAG 59 consensus_11373#1 ----CTGCTTAGGCGGCCGCGGAAACTCCTATTCCAGCCCCAAACACGGACGGTGCCAAG 56 * * * ** ** * * * * * *** ** * ** ************ consensus_11373#0 CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTAC 119 consensus_11373#1 CACAAGCAAAGACTTAAACGTCCAGGACGACTTTATGTAAAGGCAACATTTACAGGGTAC 116 ************************************************************ consensus_11373#0 CGTAGAGGACTAAGGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTG 179 consensus_11373#1 CGTAGAGGACTAATGAATCAACATGAGAATACGGCTTTACTGCGTATTGATGGAGTAGTG 176 ************* ********************************************** consensus_11373#0 GAGAGGAAATCTACAGATTTCTACCTGGGGAAACGCTGTGTGTATGTTTATAGAGCTCAA 239 consensus_11373#1 GAGAGTTTTTCTACAGATCTCTACCTGGGGAAACGCTGTGTGTATGTTTATACAGCCCAA 236 ***** ********* ********************************* *** *** consensus_11373#0 AAAAA-GAAAGTTTTTCCAAGAAGGCAAAAGCCAACGAAAATAAGAGTTATATGGGGAAA 298 consensus_11373#1 AAAAAAGAAAGTTTTTCCAAGAAGGCAAAAGCCAACGAAAATAAGAGTTATATGGGGAAA 296 ***** ****************************************************** consensus_11373#0 AATCATGCGTCCGCACGGTAACAGTGGTGTTGTTCGAGCTCGATTCAAACATAATTTACC 358 consensus_11373#1 AATCATGCGTCCG----GTGGCGCTGGTTGCGCTTGAAT--------------------- 331 ************* ** * **** * * ** consensus_11373#0 GGCATCCGCTATGGGCAAACGTATTCGAGTCATGTTGTATCCTTCACGAGTATAATGAAG 418 consensus_11373#1 ------------------------------------------------------------ consensus_11373#0 TAAA 422 consensus_11373#1 ---- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||