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Schistosoma mansoni
cluster # 11405 cluster # 11405       Sequences # 65       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11405#0 length = 626 sequences # 49  
consensus_11405#1 length = 558 sequences # 6  
consensus_11405#2 length = 523 sequences # 3  
consensus_11405#3 length = 372 sequences # 6  
consensus_11405#4 length = 118 sequences # 1  

consensusID : consensus_11405#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 49
consensus length = 626
fasta sequence
                              [GGGCGGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG-CCGTAAGCTCCCAACACC-TAAAGAGCCGAAACCTGTCCCTTACAG-AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC-AAATCACGTTTCTGGTATTTCATTAGAAA-GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA-TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC-ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTGAATATATTGCGTT]

[-] EMBL CD189579             [GGGCGGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGT                                                                                                                                                                         ]
[+] EMBL CD153376             [    GGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGGAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[+] EMBL CD145528             [    GGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACat                                                                                                       ]
[+] EMBL CD141385             [       AAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTCGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCG                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD180151             [                       GTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAGAAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAAATCACGTTTCTGGTATTTAATTAAAAATGCTGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD145640             [                        TTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATTTATACAAGTGATTAAAGTAGAGTTGTTACCAGCATTTAAGTGTCGTTGTCC ATATGTCTCACAGTTCCACGGCAGCCAATTGGAATTCCCTCTGCCTCATCGTGTGAGTGGTCCTCTTCACCATCCAAGGTTT CAACAA                                                                                      ]
[-] EMBL CD145638             [                                   CGTGCAAGTGGCGAGCTAAAACTATTNTCCG TATAGGCCCGTAAGCTCCCAACACN TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATTTAAGTGTTGTTGTCC ATATGCCACACAGTTCCCCGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTT CAACAAG                                                                                     ]
[+] EMBL CD153344             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCAAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAG                                                                                     ]
[+] EMBL CD153030             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAGTCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCGCCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA                                                                                       ]
[+] EMBL CD153307             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAGAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA                                                                                       ]
[+] EMBL CD145625             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA                                                                                       ]
[+] EMBL CD153419             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA                                                                                       ]
[+] EMBL CD153105             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAACTATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[+] EMBL CD153286             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[+] EMBL CD153206             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTGGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[+] EMBL CD202388             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACat                                                                                                       ]
[+] EMBL CD153488             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTG AATTTCCTCTGCCTCATCGTGTGAGTCGGCCTCTTCACat                                                                                                       ]
[+] EMBL CD145553             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTACCTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCCGAATCTATACAAGTGATTAAAGTACAGTCCTTACCACCATCCAAGTGTCGCCGTCCAATATGTa                                                                                                                                                                        ]
[+] EMBL CD115148             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGA CCGTAAGCTCCCGACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAG                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD153268             [                                    GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAACTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAgg                                                                                     ]
[-] EMBL CD145511             [                                     TGCAAGTGGCGAGCT AAACTATTTNCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAA                                                                                      ]
[-] EMBL CD145406             [                                     TGCAAGTGGCGAGCTAAAACTATTNTCCGTTATAGG CCGTAAGCTCNCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTNTCTGGTATTTCATTAGAAA GCTGAGAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATC                                                                                                     ]
[-] EMBL CD145598             [                                     TGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGANA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATG                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD083413             [                                          ggGGCGAGCTAAAACTATTTTCCGTTAT GG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATT                                                 ]
[+] EMBL CD145575             [                                               GAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGGGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[-] EMBL CD145635             [                                                         TATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAA                                                                                      ]
[-] EMBL CD142720             [                                                           TTTTCCGTAATAGG CCGTAAGCTCCC ACACCTTAAAGAGCCGAACCCTGTCCC TACAGAAATGCGGATAGTGGCTCCTACGTCAGTNGTAGCC CAGTCACGTATCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCATGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATC                                                                                                                                                                                               ]
[+] EMBL CD194814             [                                                              TCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGACACCGTGC                                                                                                                                                                                                                                               ]
[-] EMBL CD190746             [                                                                                                                               GATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTNTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAG                                                                                                 ]
[+] EMBL CD130506             [                                                                                                                               GATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAGGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCNTAGTGTCGTCGTCC ATATGTCACACAGTTTNACGACAGCAAATTGAAATTCCCTCTGCNTCATCGNGGGAGTCGTCCTCTTCA CATCC AGGTTTACAACA                                                                                       ]
[+] EMBL CD202294             [                                                                                                                               GATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[+] EMBL CD145591             [                                                                                                                                                                CACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGGCGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGCCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[-] EMBL CD202379             [                                                                                                                                                                                                     TGAAGAAAGGTAGCGGTGAGAT ATTTC TGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATC                                                                                                     ]
[+] EMBL CD145414             [                                                                                                                                                                                                               TAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA                                                                                       ]
[+] EMBL CD145517             [                                                                                                                                                                                                               TAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA                                                                                       ]
[-] EMBL CD145478             [                                                                                                                                                                                                                AGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCCCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAA                                                                                      ]
[-] EMBL CD179213             [                                                                                                                                                                                                                         ATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACTCAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTACTCTTCACCATCCAAGGTTTACAACAAGAAGAC                                                                                ]
[+] EMBL CD081969             [                                                                                                                                                                                                                            ATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAAT                                                  ]
[+] EMBL CD130618             [                                                                                                                                                                                                                                               ACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATTACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCACCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAA                                                                                                  ]
[+] EMBL CD153349             [                                                                                                                                                                                                                                                           CACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT                                                                                                      ]
[+] EMBL AW087119             [                                                                                                                                                                                                                                                              TGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCA CGTGCGCGA C GAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATCCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGGAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTGAATATATTGCGT ]
[-] EMBL CD145424             [                                                                                                                                                                                                                                                                             TCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATC                                                                                                     ]
[+] EMBL CD121842             [                                                                                                                                                                                                                                                                                                                                       TCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGCGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCACATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAA                                                                                   ]
[+] EMBL BG932592             [                                                                                                                                                                                                                                                                                                                                                        AGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCT                                                                                                             ]
[+] EMBL BG932377             [                                                                                                                                                                                                                                                                                                                                                       tAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCT                                                                                                               ]
[-] EMBL CD138921             [                                                                                                                                                                                                                                                                                                                                                                 TAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCATCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTTAATATATTG    ]
[-] EMBL CD138797             [                                                                                                                                                                                                                                                                                                                                                                 TAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTNTCcgtngcg             ]
[-] EMBL CD145472             [                                                                                                                                                                                                                                                                                                                                                                                         GGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTACAGTAGAGTCATGTCCAGCATCTAAGTGTCGTCGTCC ATATGTCACCCAGTTCCACGTCAGCAAACTGAAATTCCCTATGCCTCATCGTGTGAGTCGTCCTCTTCCCCATC                                                                                                     ]
[+] EMBL CD138798             [                                                                                                                                                                                                                                                                                                                                                                                            GCTCGTCACCGCGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGCCGTCC ATATGTTACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTTAATATATTGgcat]


>consensus_11405#0 GGGCGGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTAT TTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAA TGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAA AGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAA GAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAA CGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTAT ACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAG AGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAAT TGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAA GAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTT TTTCTCAAGCGTGAATATATTGCGTT



consensusID : consensus_11405#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 558
fasta sequence
                              [TCGAGGCCCAGAA-TCGGCACGAGG---GGCGAGCTAAAACTATTTTCCGTTAT-GGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCCAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCCATACATTTG]

[+] EMBL CD083339             [TCGAGGCCCAGAA TCGGCACGAGG   GGCGAGCTAAAACTATTTTCCGTTAT GGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCCAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCCATACATTTG]
[+] EMBL CD080857             [ cccGGCCAANAATTTGGCACGAGGAGCGGCGAGCTAAAACTATTTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAAT   ]
[+] EMBL CD154298             [                                                                           TAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGT                                                                                                                                        ]
[+] EMBL CD098207             [                                                                                                       ATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAAT                                                                                                                                                                                                                                                                  ]
[-] EMBL CD135406             [                                                                                                                                         AATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAG                                                                                                                                                             ]
[+] EMBL CD116267             [                                                                                                                                                                                                      AATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGT                                                                                                                                        ]


>consensus_11405#1 TCGAGGCCCAGAATCGGCACGAGGGGCGAGCTAAAACTATTTTCCGTTATGGCCGTAAGC TCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACT CAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAG GTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGA ATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAAT ATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTC ACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGT GTCGTCGTCCATATGTCACACAGTTCCACGACAGCCAATTGAAATTCCCTCTGCCTCATC GTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCT AGTTATCCCATACATTTG



consensusID : consensus_11405#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 523
fasta sequence
                              [ATTCATATCGCCGATCATTGACCATCTTTATTTCATTAGCTATATGAGCCAATACAGACTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACGTATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAATAAGTACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT]

[-] EMBL CD201449             [ATTCATATCGCCGATCATTGACCATCTTTATTTCATTAGCTATATGAGCCAATACAGACTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACGTATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAATAAGT                                                                                                                         ]
[+] EMBL CD137262             [                ATTGACCATCTTTGTTTCATTAGCTATATGAGCCAATACAGACTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACGTATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAA                                                                                                                              ]
[+] EMBL CD152997             [                                                                                                                                                                               TCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT]


>consensus_11405#2 ATTCATATCGCCGATCATTGACCATCTTTATTTCATTAGCTATATGAGCCAATACAGACT CGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACGTA TATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCCTG TTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAA TGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAA TTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACC GATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAATAAGTACAAGTGATTAAAGTAGA GTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATT GAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT



consensusID : consensus_11405#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 372
fasta sequence
                              [GTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGGGAGTCGCCCTTGTCGTCAATCACTAG]

[-] EMBL CD139543             [GTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGGGAGTCGCC                  ]
[-] EMBL CD139503             [  TTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGGGAGTCGCCCTTGTCGTCAATCACTAG]
[+] EMBL CD139393             [                                                                                                                            TGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC                                                                                ]
[+] EMBL BG932389             [                                                                                                                                                                                   GAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCT                                      ]
[-] EMBL CD141363             [                                                                                                                                                                                           AGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAA                                                    ]
[-] EMBL CD141234             [                                                                                                                                                                                              AACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAA                                              ]


>consensus_11405#3 GTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTT CTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGA GATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGG AGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAAT CTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCA CACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGGGAGTCGCCCTTGTC GTCAATCACTAG



consensusID : consensus_11405#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 118
fasta sequence
                              [GGGGTCTAAAACTATTTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCCCCAATCGATC]

[+] EMBL BG932026             [GGGGTCTAAAACTATTTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCCCCAATCGATC]


>consensus_11405#4 GGGGTCTAAAACTATTTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAAC CTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCCCCAATCGATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11405#0      GGGCGGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTAT 60
consensus_11405#4      ---------------------------------------------GGGGTCTAAAACTAT 15
consensus_11405#1      --------------------TCGAGGCCCAGAATCGGCACGAGGGGCGAGCTAAAACTAT 40
consensus_11405#3      ---------------------------GTTTCTGGTATTTCATTAGAAAGCTGAAAAAAA 33
consensus_11405#2      --ATTCATATCGCCGATCATTGACCATCTTTATTTCATTAGCTATATGAGCCAATACAGA 58
                                                                         *  * *    

consensus_11405#0      TTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAA---ACCTGT----CCCT 113
consensus_11405#4      TTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAA---ACCTGT----CCCT 68
consensus_11405#1      TTTCCGTTAT-GGCCGTAAGCTCCCAACACCTAAAGAGCCGAA---ACCTGT----CCCT 92
consensus_11405#3      TGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACA---CCCAAGAAAGCCAC 90
consensus_11405#2      CTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACG 118
                                   *      *       *   * *        *     *           

consensus_11405#0      TACAGAATG-CGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTT 172
consensus_11405#4      TACAGAATG-CGGATATTTGCTCCTAACTCAGTTGTAGCCCCCAATCGATC--------- 118
consensus_11405#1      TACAGAATG-CGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTT 151
consensus_11405#3      TGATGGTCA-AGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAAT 149
consensus_11405#2      TATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCC 178
                       *            **    *    *  **                               

consensus_11405#0      CATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAAT 232
consensus_11405#4      ------------------------------------------------------------
consensus_11405#1      CATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAAT 211
consensus_11405#3      ATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAG 209
consensus_11405#2      TGTTATA----GCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAG 234
                                                                                   

consensus_11405#0      ACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCG 292
consensus_11405#4      ------------------------------------------------------------
consensus_11405#1      ACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCG 271
consensus_11405#3      ATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTA 269
consensus_11405#2      ACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCT- 293
                                                                                   

consensus_11405#0      TTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAAC 352
consensus_11405#4      ------------------------------------------------------------
consensus_11405#1      TTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAAC 331
consensus_11405#3      CCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTC 329
consensus_11405#2      TCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATAT 353
                                                                                   

consensus_11405#0      TCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGAT 412
consensus_11405#4      ------------------------------------------------------------
consensus_11405#1      TCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGAT 391
consensus_11405#3      CCTCTGCCTCATCGTGGGAGTCGCCCTTGTCGTCAATCACTAG----------------- 372
consensus_11405#2      GCAAACCGATTGGTAGAAAGTAATTC--GAACGTGCCGTAGCAGAATAAGTACAAGTGAT 411
                                                                                   

consensus_11405#0      TAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGA 472
consensus_11405#4      ------------------------------------------------------------
consensus_11405#1      TAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGA 451
consensus_11405#3      ------------------------------------------------------------
consensus_11405#2      TAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGA 471
                                                                                   

consensus_11405#0      CAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTT 532
consensus_11405#4      ------------------------------------------------------------
consensus_11405#1      CAGCCAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTT 511
consensus_11405#3      ------------------------------------------------------------
consensus_11405#2      CAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT-------- 523
                                                                                   

consensus_11405#0      TACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGT 592
consensus_11405#4      ------------------------------------------------------------
consensus_11405#1      TACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCCATACATTTG------------- 558
consensus_11405#3      ------------------------------------------------------------
consensus_11405#2      ------------------------------------------------------------
                                                                                   

consensus_11405#0      ATTCGTTTTTTCTCAAGCGTGAATATATTGCGTT 626
consensus_11405#4      ----------------------------------
consensus_11405#1      ----------------------------------
consensus_11405#3      ----------------------------------
consensus_11405#2      ----------------------------------
                                                         




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)