These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11405#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 49 consensus length = 626 fasta sequence [GGGCGGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG-CCGTAAGCTCCCAACACC-TAAAGAGCCGAAACCTGTCCCTTACAG-AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC-AAATCACGTTTCTGGTATTTCATTAGAAA-GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA-TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC-ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTGAATATATTGCGTT] [-] EMBL CD189579 [GGGCGGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGT ] [+] EMBL CD153376 [ GGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGGAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [+] EMBL CD145528 [ GGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACat ] [+] EMBL CD141385 [ AAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTCGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCG ] [+] EMBL CD180151 [ GTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAGAAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAAATCACGTTTCTGGTATTTAATTAAAAATGCTGAAA ] [-] EMBL CD145640 [ TTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATTTATACAAGTGATTAAAGTAGAGTTGTTACCAGCATTTAAGTGTCGTTGTCC ATATGTCTCACAGTTCCACGGCAGCCAATTGGAATTCCCTCTGCCTCATCGTGTGAGTGGTCCTCTTCACCATCCAAGGTTT CAACAA ] [-] EMBL CD145638 [ CGTGCAAGTGGCGAGCTAAAACTATTNTCCG TATAGGCCCGTAAGCTCCCAACACN TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATTTAAGTGTTGTTGTCC ATATGCCACACAGTTCCCCGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTT CAACAAG ] [+] EMBL CD153344 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCAAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAG ] [+] EMBL CD153030 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAGTCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCGCCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA ] [+] EMBL CD153307 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAGAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA ] [+] EMBL CD145625 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA ] [+] EMBL CD153419 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA ] [+] EMBL CD153105 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAACTATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [+] EMBL CD153286 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [+] EMBL CD153206 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTGGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [+] EMBL CD202388 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACat ] [+] EMBL CD153488 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTG AATTTCCTCTGCCTCATCGTGTGAGTCGGCCTCTTCACat ] [+] EMBL CD145553 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTACCTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCCGAATCTATACAAGTGATTAAAGTACAGTCCTTACCACCATCCAAGTGTCGCCGTCCAATATGTa ] [+] EMBL CD115148 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGA CCGTAAGCTCCCGACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAG ] [+] EMBL CD153268 [ GTGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAACTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAgg ] [-] EMBL CD145511 [ TGCAAGTGGCGAGCT AAACTATTTNCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAA ] [-] EMBL CD145406 [ TGCAAGTGGCGAGCTAAAACTATTNTCCGTTATAGG CCGTAAGCTCNCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTNTCTGGTATTTCATTAGAAA GCTGAGAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATC ] [-] EMBL CD145598 [ TGCAAGTGGCGAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGANA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATG ] [+] EMBL CD083413 [ ggGGCGAGCTAAAACTATTTTCCGTTAT GG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATT ] [+] EMBL CD145575 [ GAGCTAAAACTATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGGGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [-] EMBL CD145635 [ TATTTTCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAA ] [-] EMBL CD142720 [ TTTTCCGTAATAGG CCGTAAGCTCCC ACACCTTAAAGAGCCGAACCCTGTCCC TACAGAAATGCGGATAGTGGCTCCTACGTCAGTNGTAGCC CAGTCACGTATCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCATGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATC ] [+] EMBL CD194814 [ TCCGTTATAGG CCGTAAGCTCCCAACACC TAAAGAGCCGAAACCTGTCCCTTACAG AATGCGGATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGACACCGTGC ] [-] EMBL CD190746 [ GATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTNTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAG ] [+] EMBL CD130506 [ GATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAGGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCNTAGTGTCGTCGTCC ATATGTCACACAGTTTNACGACAGCAAATTGAAATTCCCTCTGCNTCATCGNGGGAGTCGTCCTCTTCA CATCC AGGTTTACAACA ] [+] EMBL CD202294 [ GATATTTGCTCCTAACTCAGTTGTAGCC AAATCACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [+] EMBL CD145591 [ CACGTTTCTGGTATTTCATTAGAAA GCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGGCGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGCCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [-] EMBL CD202379 [ TGAAGAAAGGTAGCGGTGAGAT ATTTC TGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATC ] [+] EMBL CD145414 [ TAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA ] [+] EMBL CD145517 [ TAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACA ] [-] EMBL CD145478 [ AGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCCCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAA ] [-] EMBL CD179213 [ ATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACTCAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTACTCTTCACCATCCAAGGTTTACAACAAGAAGAC ] [+] EMBL CD081969 [ ATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAAT ] [+] EMBL CD130618 [ ACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATTACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCACCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAA ] [+] EMBL CD153349 [ CACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT ] [+] EMBL AW087119 [ TGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCA CGTGCGCGA C GAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATCCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGGAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTGAATATATTGCGT ] [-] EMBL CD145424 [ TCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATC ] [+] EMBL CD121842 [ TCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGCGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCACATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAA ] [+] EMBL BG932592 [ AGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCT ] [+] EMBL BG932377 [ tAGAATGCAGTAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCT ] [-] EMBL CD138921 [ TAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCATCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTTAATATATTG ] [-] EMBL CD138797 [ TAACTCAATTA TACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTNTCcgtngcg ] [-] EMBL CD145472 [ GGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTACAGTAGAGTCATGTCCAGCATCTAAGTGTCGTCGTCC ATATGTCACCCAGTTCCACGTCAGCAAACTGAAATTCCCTATGCCTCATCGTGTGAGTCGTCCTCTTCCCCATC ] [+] EMBL CD138798 [ GCTCGTCACCGCGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGCCGTCC ATATGTTACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGTATTCGTTTTTTCTCAAGCGTTAATATATTGgcat] consensusID : consensus_11405#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 558 fasta sequence [TCGAGGCCCAGAA-TCGGCACGAGG---GGCGAGCTAAAACTATTTTCCGTTAT-GGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCCAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCCATACATTTG] [+] EMBL CD083339 [TCGAGGCCCAGAA TCGGCACGAGG GGCGAGCTAAAACTATTTTCCGTTAT GGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCCAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCCATACATTTG] [+] EMBL CD080857 [ cccGGCCAANAATTTGGCACGAGGAGCGGCGAGCTAAAACTATTTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTTTACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAAT ] [+] EMBL CD154298 [ TAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGT ] [+] EMBL CD098207 [ ATGCGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAAT ] [-] EMBL CD135406 [ AATCACGTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAG ] [+] EMBL CD116267 [ AATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGT ] consensusID : consensus_11405#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 523 fasta sequence [ATTCATATCGCCGATCATTGACCATCTTTATTTCATTAGCTATATGAGCCAATACAGACTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACGTATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAATAAGTACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT] [-] EMBL CD201449 [ATTCATATCGCCGATCATTGACCATCTTTATTTCATTAGCTATATGAGCCAATACAGACTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACGTATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAATAAGT ] [+] EMBL CD137262 [ ATTGACCATCTTTGTTTCATTAGCTATATGAGCCAATACAGACTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACGTATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAA ] [+] EMBL CD152997 [ TCCTGTTATAGCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAGACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCTTCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATATGCAAACCGATTGGTAGAAAGTAATTCGAACGTGCCGTAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT] consensusID : consensus_11405#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 372 fasta sequence [GTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGGGAGTCGCCCTTGTCGTCAATCACTAG] [-] EMBL CD139543 [GTTTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGGGAGTCGCC ] [-] EMBL CD139503 [ TTCTGGTATTTCATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCTGCCTCATCGTGGGAGTCGCCCTTGTCGTCAATCACTAG] [+] EMBL CD139393 [ TGATAGTCGTTCAGGAACGCACAATATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCC ] [+] EMBL BG932389 [ GAGAATGCAGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTCCCTCT ] [-] EMBL CD141363 [ AGTAACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAA ] [-] EMBL CD141234 [ AACTCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAA ] consensusID : consensus_11405#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 118 fasta sequence [GGGGTCTAAAACTATTTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCCCCAATCGATC] [+] EMBL BG932026 [GGGGTCTAAAACTATTTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAAACCTGTCCCTTACAGAATGCGGATATTTGCTCCTAACTCAGTTGTAGCCCCCAATCGATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11405#0 GGGCGGTAAATATCCTTCGAACAGTTGGCATCATGCGTGCAAGTGGCGAGCTAAAACTAT 60 consensus_11405#4 ---------------------------------------------GGGGTCTAAAACTAT 15 consensus_11405#1 --------------------TCGAGGCCCAGAATCGGCACGAGGGGCGAGCTAAAACTAT 40 consensus_11405#3 ---------------------------GTTTCTGGTATTTCATTAGAAAGCTGAAAAAAA 33 consensus_11405#2 --ATTCATATCGCCGATCATTGACCATCTTTATTTCATTAGCTATATGAGCCAATACAGA 58 * * * consensus_11405#0 TTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAA---ACCTGT----CCCT 113 consensus_11405#4 TTTCCGTTATAGGCCGTAAGCTCCCAACACCTAAAGAGCCGAA---ACCTGT----CCCT 68 consensus_11405#1 TTTCCGTTAT-GGCCGTAAGCTCCCAACACCTAAAGAGCCGAA---ACCTGT----CCCT 92 consensus_11405#3 TGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAATACA---CCCAAGAAAGCCAC 90 consensus_11405#2 CTCGACTCGCACGTTCCATGAATCCAGCTTTTGATGCAGTTCATCTATCTGTTCCATACG 118 * * * * * * * consensus_11405#0 TACAGAATG-CGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTT 172 consensus_11405#4 TACAGAATG-CGGATATTTGCTCCTAACTCAGTTGTAGCCCCCAATCGATC--------- 118 consensus_11405#1 TACAGAATG-CGGATATTTGCTCCTAACTCAGTTGTAGCCAAATCACGTTTCTGGTATTT 151 consensus_11405#3 TGATGGTCA-AGAATTTCGGGATTTGGCTGAGATATGATAGTCGTTCAGGAACGCACAAT 149 consensus_11405#2 TATATCACGTCCAATGGCAGAGTTTACCTCTAACAATGCTTTCTGTTGGTCAAGTTTTCC 178 * ** * * ** consensus_11405#0 CATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAAT 232 consensus_11405#4 ------------------------------------------------------------ consensus_11405#1 CATTAGAAAGCTGAAAAAAATGAAGAAAGGTAGCGGTGAGATAATTTCTTGTGAAAGAAT 211 consensus_11405#3 ATGTACAAGGAGTATCGCGCTCTGACGGAGGAGAATGCAGTAACTCAATTATACCGTGAG 209 consensus_11405#2 TGTTATA----GCTTCAAGATAAAAAAGTTCGATAACAAGGTCTTCAAGTTCTCTTGAAG 234 consensus_11405#0 ACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCG 292 consensus_11405#4 ------------------------------------------------------------ consensus_11405#1 ACACCCAAGAAAGCCACTGATGGTCAAGAATTTCGGGATTTGGCTGAGATATGATAGTCG 271 consensus_11405#3 ATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGATTAAAGTAGAGTCATTA 269 consensus_11405#2 ACGTAATGTCGAGCTTCTTAAACAGAAGATCATAAGGTATATGTTTCTGGTTATGTGCT- 293 consensus_11405#0 TTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAAC 352 consensus_11405#4 ------------------------------------------------------------ consensus_11405#1 TTCAGGAACGCACAATATGTACAAGGAATATCGCGCTCTGACGGAGGAGAATGCAGTAAC 331 consensus_11405#3 CCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGACAGCAAATTGAAATTC 329 consensus_11405#2 TCATCAATTATTGAGAGCTGCTTTAGCTTCCGAACTTGGGTCGGTCGTAAATCAGGATAT 353 consensus_11405#0 TCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGAT 412 consensus_11405#4 ------------------------------------------------------------ consensus_11405#1 TCAATTATACCGTGAGATGGGTGCTCGTCACCGTGCGCGAGCAGAATCTATACAAGTGAT 391 consensus_11405#3 CCTCTGCCTCATCGTGGGAGTCGCCCTTGTCGTCAATCACTAG----------------- 372 consensus_11405#2 GCAAACCGATTGGTAGAAAGTAATTC--GAACGTGCCGTAGCAGAATAAGTACAAGTGAT 411 consensus_11405#0 TAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGA 472 consensus_11405#4 ------------------------------------------------------------ consensus_11405#1 TAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGA 451 consensus_11405#3 ------------------------------------------------------------ consensus_11405#2 TAAAGTAGAGTCATTACCAGCATCTAAGTGTCGTCGTCCATATGTCACACAGTTCCACGA 471 consensus_11405#0 CAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTT 532 consensus_11405#4 ------------------------------------------------------------ consensus_11405#1 CAGCCAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCATCCAAGGTT 511 consensus_11405#3 ------------------------------------------------------------ consensus_11405#2 CAGCAAATTGAAATTCCCTCTGCCTCATCGTGTGAGTCGTCCTCTTCACCAT-------- 523 consensus_11405#0 TACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCAATAAATTTGAAAGGTTATTTGT 592 consensus_11405#4 ------------------------------------------------------------ consensus_11405#1 TACAACAAGAAGACCTACAACAGCCTTCTAGTTATCCCATACATTTG------------- 558 consensus_11405#3 ------------------------------------------------------------ consensus_11405#2 ------------------------------------------------------------ consensus_11405#0 ATTCGTTTTTTCTCAAGCGTGAATATATTGCGTT 626 consensus_11405#4 ---------------------------------- consensus_11405#1 ---------------------------------- consensus_11405#3 ---------------------------------- consensus_11405#2 ---------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||