These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11411#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 35 consensus length = 1108 fasta sequence [ACCATTTA-TTTTCAGG-ATTCATTTTTGAA-CCA-GATGAACATCGGTGTATATTGG-AAAATTCTTGACTGTGTTTCAGAATTTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTGTAAGTTTGTGGTAATAACATCTGCGGA-GTATCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA-CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC-AACCGATAGT-CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAAGTTAATAGATTCCTTCTTTTCATCTTCTTTCAACCATGACATTGATGACAATGAATCACTCAAGGTTGTTTTCAGTTGTTCGAACATTTGAAGAACCTGAGTTTTTGTACTTTCATTTATACTAGAATATTTATGATACTTTTCTATTGTCCATCGGAAATTTTCTTTTACTTCATCAATGCAACTTGTTGGCTTTTTCGGAATGGTAGAAGGATAAAACTCAGGGAAATATCGATTCAAAATATTTTTCATGTTGAACAAGAAACTGATCGTCGTCATAGCGTGTAGATTTTTTCTTCCGTTATTTGTTTCCATAGCCGTTGCGTGTATATCACAAACCTTCCGCAAGGAATC] [-] EMBL CD148926 [ACCATTTA TTATCAGG ATTCATTTTTGAA CCA GATG ACATCGGTGTATATTGG AAAATTCTTGACTGTGTTTCAGAATCTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTGTAAGTTTGTGGTAATAACATCT CGGAGGTATCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGA ] [-] EMBL CD149044 [ ATTTA TCTTCAGG ATTCATTTTTGAA CCG GATGAACATCGGTGAATATTGG AAAATTCTTGACTGTGTTTCAGAATTTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTGTAAGTTTGTGGTAATAACATCTGCGGA GTATCTAGTACACATCATTTTTGCAAACGATCTGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTA ] [-] EMBL CD148974 [ ATCTA TTCTCAGC ATTCATTTTTGAG CCA CATGAACATCGGTGTATATTGA ACAATTCTGGACTGTGTTTCAGACTTTCATGCACGCTGAATATGTATCTGGAGTTGAAAGACGGTAAG TTGTGGTAAT ACATCCGCGAA GTATCTAGTACACATCATTTTT CTAACGATGAG AAAACAATCTTTTTCCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATATCATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGCACTGGGAATTCCCATGATTATCTTCTTCCGTGTCATTATTCACTTCATACATAAGCTGGCGACCAAT ] [-] EMBL CD149016 [ ctTTTAGTTTTCAGGAATTCATATTTGAACCCAGGATGACCATCGGTGTATATGGGAAAAATTCTTGGCTGTGTTTCAGAATTTCATTCGCGCTGAATTTGTATCTGGAGTTGGAAGACTGTAAGTTTGTGGTAATAACATCTGCGGA GTATATAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTATAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAATCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGTTATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGagcgaacg ] [+] EMBL CD146912 [ TGTGGTAATAACATCTGCGGA GTATCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATAT ] [-] EMBL CD148909 [ TGCGGA GTATCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGA ] [+] EMBL CD157237 [ TCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGATTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGAACAATAAACC AACCGATAGT CCCATGTTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTT ] [+] EMBL CD157215 [ TCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACCAAACCGATAGTCCCCATATCTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCG ] [+] EMBL CD119082 [ TCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTCGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACG ] [+] EMBL CD157286 [ TCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAAT ] [+] EMBL CD119164 [ TCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTC ] [+] EMBL CD119199 [ TCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATGACATGAGACCATTAATATCGGCTGACAAAGATCCCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGG ] [+] EMBL CD095342 [ GTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGGTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTACTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCG ] [+] EMBL CD095280 [ GTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATA ] [+] EMBL CD095338 [ GTACACATCATTTTTACAAACGATGAGAAAAACAA CTTCCTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCG ] [+] EMBL CD095286 [ GTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACGTTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCG ] [+] EMBL CD095358 [ GTACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGACCCTAAAAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGAATATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATCTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCG ] [-] EMBL CD095146 [ TACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGT ] [-] EMBL CD094966 [ TACACATCATTTTTGCAAACGATGAGAAAAACAA CTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGT ] [-] EMBL CD148946 [ CCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTA ] [-] EMBL CD158737 [ TCAAATCCGTNNTGTTGTAGTCTTTGAAGCTGTCCTGTTCCTGCAAGCAACATATGTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAAGTTAATAGATTCCTTCTTTTCATCTTCTTTCAACCATG ] [+] EMBL CD165336 [ TCAAATCCGTTTTGTTGTAGTCTTTGGAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGT AATTGATTT AGGAATTNGGTCT ] [-] EMBL CD158709 [ TCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATAT ] [-] EMBL CD148939 [ TCCGTTTTGTTGTAGTCTTTGAAGCTGTCATGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGTTGGCGACCAATAAACC AA ] [-] EMBL CD148941 [ CATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AA ] [-] EMBL CD148922 [ GAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTA ] [-] EMBL CD096004 [ TTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAAG ] [+] EMBL CD146925 [ CCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAA ] [+] EMBL CD146903 [ CCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAA ] [+] EMBL CD146746 [ CCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACATAAGCTGGCGACCAATAAACC AACCGATAGT CCCATATTTTTCAGACATTGAATATCCTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAA ] [+] EMBL CD114017 [ GGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGATTTCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAAGTTAATAGATTCCTTCTTTTCATCTTCTTTCAACCAT ] [-] EMBL CD148977 [ GATATCTTAATAAGTTTATTTTCAGCCGAACCAGATATGTACGGCATAAAAGTGGAAGCGTCAGGTTCAGCGTTGGTATCCAGTGATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAATCATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAAGTTAATAGATTCCTTCTTTTCATCTTCTTTCAAC ] [-] EMBL CD160602 [ TCTGCGGACAAACTTTTCGAAGTAATTATGGACAAGTGGAATGAATAAGCCAAGTTAATAGATTCCTTCTTTTCATCTTCTTTCAACCATGACATTGATGACAATGAATCACTCAAGGTTGTTTTCAGTTGTTCGAACATTTGAAGAACCTGAGTTTTTGTACTTTCATTTATACTAGAATATTTATGATACTTTTCTATTGTCCATCGGAAATTTTCTTTTACTTCATCAATGCAACTTGTTGGCTTTTTCGGAATGGTAGAAGGATAAAACTCAGGGAAATATCGATTCAAAATATTTTTCATGTTGAACAAGAAACTGATCGTCGTCATAGCGTGTAGATTTTTTCTTCCGTTATTTGTTTCCATAGCCGTTGCGTGTATATCACAAACCTTCCGCAAGGAATC] [-] EMBL CD160554 [ TCTGCGGACAAACTTTTCGAAGTAATTATGGTCAAGTGGAATGAATTAGCCAAGTTAATAGATTCCTTCTTTTCATCTTCTTTCAACCATGACATTGATGACAATGAATCACTCAAGGTTGTTTTCAGTTGTTCGAACATTTGAAGAACCTGAGTTTTTGTACTTTCATTTATACTAGAATATTTATGATACTTTTCTATTGTCCATCGGAAATTTTCTTTTACTTCATCAATGCAACTTGTTGGCTTTTTCGGAATGGTAGAAGGATAAAACTCAGGGAAATATCGATTCAAAATATTTTTCATGTTGAACAAGAAACTGATCGTCGTCATAGCGTGTAGATTTTTTCTTCCGTTATTTGTTTCCATAGCCGTTGCGTGTATATCACAAACCTTCCGCAAGGA ] [-] EMBL CD160628 [ TCTGCGGACAAACTTTTCGAAGTAATTATGGTCAAGTGGAATGAATTAGCCAAGTTAATAGATTCCTTCTTTTCATCTTCTTTCAACCATGACATTGATGACAATGAATCACTCAAGGTTGTTTTCAGTTGTTCGAACATTTGAAGAACCTGAGTTTTTGTACTTTCATTTATACTAGAATATTTATGATACTTTTCTATTGTCCATCGGAAATTTTCTTTTACTTCATCAATGCAACTTGTTGGCTTTTTCGGAATGGTAGAAGGATAAAACTCAGGGAAATATCGATTCAAAATATTTTTCATGTTGAACAAGAAACTGATCGTCGTCATAGCGTGTAGATTTTTTCTTCCGTTATTTGTTTCCATAGCCGTTGCGTGTATATCACAAACCTTCCGCAAGGA ] consensusID : consensus_11411#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 27 consensus length = 645 fasta sequence [ATTCAGCTATTGAATTAGCCATAGAATCCGGAGTCATAGTGGAATTAGACACAGTCAGTTCTTGAGGATATCGACATATTTTTGACTAATAATTCGATAAGAGTATTTTGTTG-TTGCAAAAAGGTTTTCAGATCATCCATTTTCTTGATACAAAGTTCACTTTAACTGAATACGTAAGCGTAGATCCG-TTTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA--TGTTATAAACGT--AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT-GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC-CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT-GACTATAACGTCAATATATTTCACACCAA-AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCCATCTATAATAAGGATAGGGAAATATATATATACATAACACCTGTCATCCTGTCTAATGTCTGACTCATCAAGACAACCAATCATTATCATTCTCGCCCACACATCACCTGCCTGACTTGTTAACTTACAATACGCCGACGGCATAG] [-] EMBL CD164366 [ATTCAGCTATTGAATTAGCCATAGAATCCGGAGTCATAGTGGAATTAGACACAGTCAGTTCTTGAGGATATCGACATATTTTTGACTAATAATTCGATAAGAGTATTTTGTTGCTGGCCAAAAGGTTTTCAGATCATCCATTTTCTTGATAC AAGTTCACTTT ] [+] EMBL CD192404 [ GGATATCGACATATTTTTGACTAATAATTCGATAAGAGTATTTTGTTG TTGCAAAAAGGTTTTCAGATCATCCATTTTCTTGATACAAAGTTCACTTTAACTGAATACGTAAGCGTAGATCCG TTTTAATCACCGTCGCCAATGTTATAAACGTATGTATGCCGTCGCCAAT TGTTATGAACGT AGAGAGAGAGAGAGGATGCTGATTATA ] [-] EMBL CD185722 [ TATTTTTGAGTAATAATTCGATAAGAGTATTTTGTTG TTGCAAAAAGGTTTTCAGATCATCCATTATCTTGATACAAAGTTCACTTTAAGTGAATACGTAAGCGTAGATCAG TTTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAAT TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGATTATAACTTTAGGGGTTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCCACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAG ] [-] EMBL CD171278 [ TTTTGTTG TTGCAAAAAGGTTTTCAGATCATCCATTTTCTT ATACAAAGTTCACTTTAACTGAATACGTAAGCGTAGATCCGTTTTTAATCACCGTCGCCAATGTTATAAACGCATGGATGCCGTCGCCAA TGTTATAAACGTAGAGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAA ] [-] EMBL CD194120 [ ATACGTAAGCGTAGATCCG TTTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAG ] [-] EMBL CD194019 [ ATACGTAAGCGTAGATCCG TTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAG ] [+] EMBL CD193992 [ ATCCG TTTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTGGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTCAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAA ] [+] EMBL CD193991 [ ATCCG TTTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAA ] [-] EMBL CD194124 [ TCCG TTTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAAT ] [-] EMBL CD194030 [ TCCG TTTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACAT ] [-] EMBL CD194007 [ TCCG TNTTAATCACCGTCGCCAATGTTATAAACGCAAGGATGCCGTCGCCAA TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAG ] [-] EMBL CD186130 [ tccttgCG TTTTAATCACCGTCGCCAATGTTATAAACGTATGGATGCCGTCGCCAAT TGTTATAAACGT AGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCA ] [+] EMBL CD128539 [ AACGCATGGATGCCGTCGCCAAATTGTTAT AACGT AGAGAGAGAGAGAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCC GACTATAACGTCAATATATTTCACACCAACAATTTGAAAAAT ] [-] EMBL CD202791 [ tgtATGCCGTCGCCAAT TGTTATAAACGT AGAGAGAGAGAGAGGATGCTGATTATAACTTTAGGGGTTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATAGAAATCACAC ] [-] EMBL CD193883 [ TAAACGT AGAGAGAGAGAGAGGATGCTGATTATAACTTTAGGGGTTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAG ] [+] EMBL CD084967 [ GAGGATGCTGGTTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCTGGCCTATAACGTCAATATAT ] [+] EMBL CD110783 [ TTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCGATCTATAATAAGGATAGGGAAATATATATATACATAACACCTGTCATCCTGTCTAATGTCTGACTCATCAAGACAACCAATCATTATCATTCTCGCCCACACATCAGGAGACTGACTTGTTAACTTACAATACGCCGACGGCATAG] [+] EMBL CD112000 [ TTATAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATC ] [+] EMBL CD095700 [ TAACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCCATCAATAATAAGGATAGGGAAATATATATATAC ] [-] EMBL CD086030 [ AACTTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCCATCTATAATAAGGATAGGGAAATATATATATACA ] [-] EMBL CD096107 [ AACCTTAGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCAATCTATAATAAGGATAGGGAAATATATATATACA ] [+] EMBL CD182198 [ ccctggatGGGGGTTCTGGTTATAACAGTCCTTTTACTTCTTACACGTATGG GGGACGTTATTTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGA ] [+] EMBL CD084535 [ GTTATAACAGTCCTTTTACTTCTTACACGTATGT GGGACGTTAATTTATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GGCTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCCATCTATAATAAGGATAGGGAAATATATATATACATAACACCTGTCATCCTGTCTAATGTCTGACTCATCAAGACAACCAATCATTATCATTCTCGCCCACACATCACCTACCTc ] [+] EMBL CD068501 [ GTATGTGGGGACG TATTATATCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCAATCTATAATAAGGATAGGGAAATATATATATACATAACACCTGTCATCCTGTCTAATGTCTGACTCATCAAGACAACCAATCAT ] [-] EMBL CD195119 [ cCTTAGACGAATATCTACACTAGATTCCCAC CCAGTGTCTATTCTACAGGACTTCAACACAACTCAGATCAAGAACACGAGATTAGCTT GACTATAACGTCAA ] [-] EMBL CD194053 [ ATATCTACACTAGA TCCCACNNCAGTGTCTATTCTACAGGACTTCAACAGAACTCAGATCAAGAACACAATATTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAG ] [-] EMBL CD092492 [ TTAGCCT GACTATAACGTCAATATATTTCACACCAA AATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCCATCTATAATAAGGATAGGGAAATATATATATACATAACACCTGTCATCCTGTCTAATGTCTGACTCATCAAGACAACCAATCATTATCATTCTCGCCCACACATCACCTCCC ] consensusID : consensus_11411#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 430 fasta sequence [CATTTATTCTCAGGATTCATTTTTGAACCAGATGAACATCGGTGTATATTGGAAAATTCTTGACTGTGTTTCAGAATTTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTGTAAGTTTGTGGTAATAACATCTGCGGAGTATCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAACTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACACTAAAAAGGGCGCCCCCC] [+] EMBL CD148852 [CATTTATTCTCAGGATTCATTTTTGAACCAGATGAACATCGGTGTATATTGGAAAATTCTTGACTGTGTTTCAGAATTTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTGTAAGTTTGTGGTAATAACATCTGCGGAGTATCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAACTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATACACTAAAAAGGGCGCCCCCC] [+] EMBL CD148850 [CATTTATTCTCAGGATTCATTTTTGAACCAGATGAACATCGGTGTATATTGGAAAATTCTTGACTGTGTTTCAAAATTTCATTCACGCTGAATTTGTATCT ] [-] EMBL CD149025 [ ATTTATTCTCAGGATTCATTTTTGAACCAGACGAACATCGGTGTATATTGGAAAATTCTTGACTGTGTTTCAGAATTTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTGTAAGTTTGTGGTAATAACATCTGCGGAGTATCTAGTACACATCATTTTTGCAAACGATGAGAAAAACAACTTCTTTCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATAACATGAGACCATTAATATCGGCTGACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTGAAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGACATACAGGAGGACTGGGAATTCCCATGATTATC ] consensusID : consensus_11411#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 173 fasta sequence [CAGAACTGGCGCTGTGGGATGAACCAAACGTTCGGTTAAGGTGCCTAACACGACGCTCATGAGATACCACAAAAGGTGTTGGTTGGTCTAGACAGCAGGACGGTGGCCATGGAAGTCGGAAGCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACCAGCCCTGAAAA] [+] EMBL AA958278 [CAGAACTGGCGCTGTGGGATGAACCAAACGTTCGGTTAAGGTGCCTAACACGACGCTCATGAGATACCACAAAAGGTGTTGGTTGGTCTAGACAGCAGGACGGTGGCCATGGAAGTCGGAAGCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACCAGCCCTGAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11411#0 ACCATTTATTTTCAGGATTCATTTTTGAACCAGATG-AACATCGGTGTATATTGGAAAAT 59 consensus_11411#2 --CATTTATTCTCAGGATTCATTTTTGAACCAGATG-AACATCGGTGTATATTGGAAAAT 57 consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ---------------ATTCAGCTATTGAATTAGCCATAGAATCCGGAGTCATAGTGGAAT 45 consensus_11411#0 TCTTGACTGT-GTTTCAGAATTTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTG 118 consensus_11411#2 TCTTGACTGT-GTTTCAGAATTTCATTCACGCTGAATTTGTATCTGGAGTTGGAAGACTG 116 consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 TAGACACAGTCAGTTCTTGAGGATATCGACATATTTTTGACTAATAATTCGATAAGAGTA 105 consensus_11411#0 TAAGTTTGTGGTAATAACATCTGCGGAGTATCTAGTACACATCATTTTTGCAAACGATGA 178 consensus_11411#2 TAAGTTTGTGGTAATAACATCTGCGGAGTATCTAGTACACATCATTTTTGCAAACGATGA 176 consensus_11411#3 ------------------------------------------CAGAACTG-GCGCTGTGG 17 consensus_11411#1 TTTTGTTGTTGCAAAAAGGTTTTCAGATCATCCATTTTCTTGATACAAAGTTCACTTTAA 165 * * * consensus_11411#0 GAAAA-ACAACTTCTT---TCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATA 234 consensus_11411#2 GAAAA-ACAACTTCTT---TCCATCCAAATCTCCATCACTCGCGTATGTTTTAAAAGATA 232 consensus_11411#3 GATGA-ACCAAA-CGT---TCGGTTAAGGTGCCTAACACG-----ACGCTC-ATGAGATA 66 consensus_11411#1 CTGAATACGTAAGCGTAGATCCGTTTTAATCACCGTCGCCA----ATGTTATAAACGCAA 221 * ** * * ** * * * * * * * * * * * consensus_11411#0 ACATGAGACCATTAATATCGGCTG-ACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTG 293 consensus_11411#2 ACATGAGACCATTAATATCGGCTG-ACAAAGATCTCAAATCCGTTTTGTTGTAGTCTTTG 291 consensus_11411#3 CCACAAAA-----GGTGTTGGTTG-GTCTAGACAGCAGGACGGTGGCCATGGAAG-TCGG 119 consensus_11411#1 GGATGCCGTCGCCAATGTTATAAACGTAGAGAGAGAGAGAGGATGCTGGTTATAACTTTA 281 * * * *** * * * consensus_11411#0 AAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGAC 353 consensus_11411#2 AAGCTGTCTTGTTCCTGCAAGCAACATATTTGAGCCTCAGAATCTGTTGCTTCTTCTGAC 351 consensus_11411#3 AAGCCGCTAAGGAGTGTGTAACAACTCACCTG-----CCGAATCAACCAGCCCTGAAAA- 173 consensus_11411#1 GGGGGTTCTGGTTATAACAGTCCTTTTACTTC---TTACACGTATGTGGGACGTTAATTT 338 * * * * * * * consensus_11411#0 ATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATAC 413 consensus_11411#2 ATACAGGAGGACTGGGAATTCCCATGATTATCTTCTTCCTTGTTATTATTCACTTCATAC 411 consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ATCTTAGACGAAT---ATCTACACTAGATTCCCACCCAGTGTCTATTCTACAGGACTTCA 395 consensus_11411#0 AT--AAGCTGGCGACCAATAAACCAACCGATAGTCCCATATTTTTCAGACATTGAATATC 471 consensus_11411#2 ACTAAAAAGGGCGCCCCCC----------------------------------------- 430 consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ACAGAACTCAGATCAAGAACACAATATTAGCCTGACTATAACGTCAATATATTTCACACC 455 consensus_11411#0 CTTCTTTGAGGTATGGTGGGTTTAATAGACCGGCAGATATCTTAATAAGTTTATTTTCAG 531 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 AAAATCCGACACATGGAACAGTCAATAAGTCTCAATAAGTGTCCATCTATAATAAGGATA 515 consensus_11411#0 CCGAACCAGATATGTACGGCATAAAAGTGAAAGCGTCAGGTTCAGCGTTGGTATCCAGTG 591 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 GGGAAATATATATATACATAACACCTGTCATCCTGTCTAATGTCTGACTCATCAAGACAA 575 consensus_11411#0 ATTTGTAAATTGATTTAAGGAATTTGGTCTTCTGAGAATAGTACACGTTCATGAAGTAAT 651 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 CCAATCATTATCATTCTCGCCCACACATCACCTGCCTGACTTGTTAACTTACAATACGCC 635 consensus_11411#0 CATCCTCGGATATTTCATTAGTGAATATAAAATCTCTGCTCTCTCTATCTTCTGCGGACA 711 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 GACGGCATAG-------------------------------------------------- 645 consensus_11411#0 AACTTTTCGAAGTAATTATGGACAAGTGGAATGAATTAGCCAAGTTAATAGATTCCTTCT 771 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ------------------------------------------------------------ consensus_11411#0 TTTCATCTTCTTTCAACCATGACATTGATGACAATGAATCACTCAAGGTTGTTTTCAGTT 831 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ------------------------------------------------------------ consensus_11411#0 GTTCGAACATTTGAAGAACCTGAGTTTTTGTACTTTCATTTATACTAGAATATTTATGAT 891 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ------------------------------------------------------------ consensus_11411#0 ACTTTTCTATTGTCCATCGGAAATTTTCTTTTACTTCATCAATGCAACTTGTTGGCTTTT 951 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ------------------------------------------------------------ consensus_11411#0 TCGGAATGGTAGAAGGATAAAACTCAGGGAAATATCGATTCAAAATATTTTTCATGTTGA 1011 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ------------------------------------------------------------ consensus_11411#0 ACAAGAAACTGATCGTCGTCATAGCGTGTAGATTTTTTCTTCCGTTATTTGTTTCCATAG 1071 consensus_11411#2 ------------------------------------------------------------ consensus_11411#3 ------------------------------------------------------------ consensus_11411#1 ------------------------------------------------------------ consensus_11411#0 CCGTTGCGTGTATATCACAAACCTTCCGCAAGGAATC 1108 consensus_11411#2 ------------------------------------- consensus_11411#3 ------------------------------------- consensus_11411#1 ------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||