Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 123 cluster # 123       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_123#0 length = 408 sequences # 2  
consensusID : consensus_123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 408
fasta sequence 
                              [GGGATTCACAAAATTCCCCATCATCATCTTCACCATCATTAATAAATAAAATAAAGAATATGAAATCTGCGGGTGGTGGCAATAATGTTCCGTTATCTGATGAAGCAAGACTTTCATGGGCTATCATTGAAAGTCAACGCCTTGCACAAATTGAGGAAGAAGCTCGGAAACAAGAAGAAGCTGATCTTGAACTAGCACTTCGTTTAAGTAAACTAGATTCATCAAATCGACATTAAGGAAGATAGTGAAAGCCGATTGCCGCTTTTATTTCCATCTATGAAAACCTAGAAAATAACAGTAAAAAACATGTTGTCTTCTTATCTACCAATTCTTTTACTCCATATTCTTTTTTAATTTAAGTTGGGCTATTGTTCAACTCCGTTTTCATGAATATAAATACATGATTTT]

[+] EMBL CD080363             [GGGATTCACAAAATTCCCCATCATCATCTTCACCATCATTAATAAATAAAATAAAGAATATGAAATCTGCGGGTGGTGGCAATAATGTTCCGTTATCTGATGAAGCAAGACTTTCATGGGCTATCATTGAAAGTCAACGCCTTGCACAAATTGAGGAAGAAGCTCGGAAACAAGAAGAAGCTGATCTTGAACTAGCACTTCGTTTAAGTAAACTAGATTCATCAAATCGACATTAAGGAAGATAGTGAAAGCCGATTGCCGCTTTTATTTCCATCTATGAAAACCTAGAAAATAACAGTAAAAAACATGTTGTCTTCTTATCTACCAATTCTTTTACTCCATATTCTTTTTTAATTTAAGTTGGGCTATTGTTCAACTCCGTTTTCATGAATATAAATACATGATTT ]
[-] EMBL CD074279             [  GATTCACAAAATTCCCCATCATCATCTTCACCATCATTAATAAATAAAATAAAGAATATGAAATCTGCGGGTGGTGGCAATAATGTTCCGTTATCTGATGAAGCAAGACTTTCATGGGCTATCATTGAAAGTCAACGCCTTGCACAAATTGAGGAAGAAGCTCGGAAACAAGAAGAAGCTGATCTTGAACTAGCACTTCGTTTAAGTAAACTAGATTCATCAAATCGACATTAAGGAAGATAGTGAAAGCCGATTGCCGCTTTTATTTCCATCTATGAAAACCTAGAAAATAACAGTAAAAAACATGTTGTCTTCTTATCTACCAATTCTTTTACTCCATATTCTTTTTTAATTTAAGTTGGGCTATTGTTCAACTCCGTTTTCATGAATATAAATACATGATTTT]




>consensus_123#0
GGGATTCACAAAATTCCCCATCATCATCTTCACCATCATTAATAAATAAAATAAAGAATA
TGAAATCTGCGGGTGGTGGCAATAATGTTCCGTTATCTGATGAAGCAAGACTTTCATGGG
CTATCATTGAAAGTCAACGCCTTGCACAAATTGAGGAAGAAGCTCGGAAACAAGAAGAAG
CTGATCTTGAACTAGCACTTCGTTTAAGTAAACTAGATTCATCAAATCGACATTAAGGAA
GATAGTGAAAGCCGATTGCCGCTTTTATTTCCATCTATGAAAACCTAGAAAATAACAGTA
AAAAACATGTTGTCTTCTTATCTACCAATTCTTTTACTCCATATTCTTTTTTAATTTAAG
TTGGGCTATTGTTCAACTCCGTTTTCATGAATATAAATACATGATTTT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)