cluster # 1522

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Schistosoma mansoni
cluster # 1522 cluster # 1522 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1522#0 length = 548 sequences # 2

consensusID : consensus_1522#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 548
fasta sequence

                              [TTTCTTATAAATCAAAGGCATAAAATTGAGAAGAAAAATTTAAAACGTAAGCAGAAACCAAAAACAAACAAACAAAAAACAAACTCAGTTGGTAACTTCAATAAACGTTTACTAATGTTTTATCCTTTCTTTTTTTCGATGTACAAAATAAAATCATAGCTGTTTAGAAAACAAATTTAATAATCAAAATTTTGTTTGTATCCAGTTTGATTTGTGTGTATTTCATTAAAAATTAGGCTAATGTTGATATCCATTTCTTGGTATGACTTAAGAGCTTTGTTTTAAATCATTTATTTATAATGGATACGTTGTTTATTGAAGATAAGTTATTAAAAGAACATTGAATTTTTTTAAATAACCAGTAACCAAAACAATGTTTACACTTGATAGTTAGTTTCTCTGCTGACGG-ACTATATTATTAGTATATAAGTAGTATATAAGATAATTAAGAAAAAAACAGAAATCAATTCAAATTAACATAAAATTCAACTACTTTAACCAATAAAAAATCAATGAAAACTTGTTGGAGTTTTTACCGTTTTTGAAAA]

[+] EMBL CD077279             [TTTCTTATAAATCAAAGGCATAAAATTGAGAAGAAAAATTTAAAACGTAAGCAGAAACCAAAAACAAACAAACAAAAAACAAACTCAGTTGGTAACTTCAATAAACGTTTACTAATGTTTTATCCTTTCTTTTTTTCGATGTACAAAATAAAATCATAGCTGTTTAGAAAACAAATTTAATAATCAAAATTTTGTTTGTATCCAGTTTGATTTGTGTGTATTTCATTAAAAATTAGGCTAATGTTGATATCCATTTCTTGGTATGACTTAAGAGCTTTGTTTTAAATCATTTATTTATAATGGATACGTTGTTTATTGAAGATAAGTTATTAAAAGAACATTGAATTTTTTTAAATAACCAGTAACCAAAACAATGTTTACACTTGATAGTTAGTTTCTCTGCTGACGG ACTATATTATTAGTATATAAGTAGTATATAAGATAATTAAGAAAAAAACAGAAATCAATTCAAATTAACATAAAATTCAACTACTTTAACCAATAAAAAATCAATGAAAACTTGTTGGAGTTTTTACCGTTTTTG    ]
[-] EMBL SMAA69198            [                                                                                                                                                                                                                                                                                                                                                                                             ACTTGATAGTTAGTTTCTCTGCTG CGGAACTATATTATTAGTATATAAGTAGCATATAAGATAATTAAGAAAAAAACAGAAATCAATTCAAATTAACATAAAATTCAACTACTTTAACCAATAAAAAATCAATGAAAACTTGTTGGAGTTTTTACCGTTTTTGAAAA]




>consensus_1522#0
TTTCTTATAAATCAAAGGCATAAAATTGAGAAGAAAAATTTAAAACGTAAGCAGAAACCA
AAAACAAACAAACAAAAAACAAACTCAGTTGGTAACTTCAATAAACGTTTACTAATGTTT
TATCCTTTCTTTTTTTCGATGTACAAAATAAAATCATAGCTGTTTAGAAAACAAATTTAA
TAATCAAAATTTTGTTTGTATCCAGTTTGATTTGTGTGTATTTCATTAAAAATTAGGCTA
ATGTTGATATCCATTTCTTGGTATGACTTAAGAGCTTTGTTTTAAATCATTTATTTATAA
TGGATACGTTGTTTATTGAAGATAAGTTATTAAAAGAACATTGAATTTTTTTAAATAACC
AGTAACCAAAACAATGTTTACACTTGATAGTTAGTTTCTCTGCTGACGGACTATATTATT
AGTATATAAGTAGTATATAAGATAATTAAGAAAAAAACAGAAATCAATTCAAATTAACAT
AAAATTCAACTACTTTAACCAATAAAAAATCAATGAAAACTTGTTGGAGTTTTTACCGTT
TTTGAAAA

clustalw multiple alignements is not computed in this case