cluster # 2018

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Schistosoma mansoni
cluster # 2018 cluster # 2018 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2018#0 length = 721 sequences # 2

consensusID : consensus_2018#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 721
fasta sequence

                              [AGGGCAAATAAATGACTTGAGCGTTCTAAGGGCAGATGCGATTT-GTAATATGATGGACGGACCACTTATCTACCTAGCAATGGATAATGCAAAAGTAATCATCAATATATTAAAGGCAGTGCACTTCCGCGATCTTGCCACAATATTTGCCACAAATAATGGTATTAAGGTGACAGTAGAGGACTCAAAATGCATTCAAGGAAACGCCTTTCTGCATTCTGCGCTTTTCCGTGAATACTCTGTAAAGAAGGATATAGTATCGTTTAGGACAAACCTTGGTGTACTTGTTGTAAGTAGAATCTAGTACTTCTTCAGGTCCTTCAGGATTGTCTTTCTATTTTTGGGACTTCAGTTCAAGGACCACCAATTTCATTCATTTTATCTTATAAAACTCACGGGAGTGCTTTGAACATTCTACTAGAAGAAAATGGAGTTGTGGCAGAATGCAACATTAAAACTATGGAGGCGTTTGAAATATTGGACTTTGATTTTTCAAGCAGTAATATCTCAGATAAATTCATAATGAAGTCAGAATGTATGCGTGAAGCGTTCAACGAACTTGATACTTCAAGTGAAATCTTGGAAGTTGCTGTAATACCACCTCCAGCTGTTCAGTCTCGTCTTCGTTTAACGACGTATGGTTTCGCTGGGACTATGCATTNTGACTTACCTCGATCATCTGACCAAGTGGAAGTTTTTGAATCTGCAGCTGCAAGTCCTC]

[+] EMBL CD081302             [AGGGCAAATAAATGACTTGAGCGTTCTAAGGGCAGATGCGATTT GTAATATGATGGACGGACCACTTATCTACCTAGCAATGGATAATGCAAAAGTAATCATCAATATATTAAAGGCAGTGCACTTCCGCGATCTTGCCACAATATTTGCCACAAATAATGGTATTAAGGTGACAGTAGAGGACTCAAAATGCATTCAAGGAAACGCCTTTCTGCATTCTGCGCTTTTCCGTGAATACTCTGTAAAGAAGGATATAGTATCGTTTAGGACAAACCTTGGTGTACTTGTTGTAAGTAGAATCTAGTACTTCTTCAGGTCCTTCAGGATTGTCTTTCTATTTTTGGGACTTCAGTTCAAGGACCACCAATTTCATTCATTTTATCTTATAAAACTCACGGGAGTGCTTTGAACATTCTACTAGAAGAAAATGGAGTTGTGGCAGAATGCAACATTAAAACTATGGAGGCGTTTGAAATATTGGACTTTGATTTTTCAAGCAGTAATATCTCAGATAAATTCATAATGAAGTCAGAATGTATGCGTGAAGCGTTCAACGAACTTGATACTTCAAGTGAAATCTTGGAAGTTGCTGTAATACCACCTCCAGCTGTTCAGTCTCGTCTTCGTTTAACGACGTATGGTTTCGCTGGGACTATGCATTNTGACTTACCTCGATCATCTGACCAAGTGGAAGTTTTTGAATCTGCAGCTGCAAGTCCTC]
[+] EMBL CD084147             [              ACTTGAGCGTTCTAAGGGCAGATGCGATTTAGTAATATGATGGACGGACCACTTATCTACCTAGCAATGGATAATGCAAAAGTAATCATCAATATATTAAAGGCAGTGCACTTCCGCGATCTTGCCACAATATTTGCCACAAATAATGGTATTAAGGTGACAGTAGAGGACTCAAAATGCATTCAAGGAAACGCCTTTCTGCATTCTGCGCTTTTCCGTGAATACTCTGTAAAGAAGGATATAGTATCGTTTAGGACAAACCTTGGTGTACTTGTTGTAAGTAGAATCTAGTACTTCTTCAGGTCCTTCAGGATTGTCTTTCTATTTTTGGGACTTCAGTTCAAGGACCACCAATTTCATTCATTTTATCTTATAAAACTCACGGGAGTGCTTTGAACATTCTA                                                                                                                                                                                                                                                                                                                ]




>consensus_2018#0
AGGGCAAATAAATGACTTGAGCGTTCTAAGGGCAGATGCGATTTGTAATATGATGGACGG
ACCACTTATCTACCTAGCAATGGATAATGCAAAAGTAATCATCAATATATTAAAGGCAGT
GCACTTCCGCGATCTTGCCACAATATTTGCCACAAATAATGGTATTAAGGTGACAGTAGA
GGACTCAAAATGCATTCAAGGAAACGCCTTTCTGCATTCTGCGCTTTTCCGTGAATACTC
TGTAAAGAAGGATATAGTATCGTTTAGGACAAACCTTGGTGTACTTGTTGTAAGTAGAAT
CTAGTACTTCTTCAGGTCCTTCAGGATTGTCTTTCTATTTTTGGGACTTCAGTTCAAGGA
CCACCAATTTCATTCATTTTATCTTATAAAACTCACGGGAGTGCTTTGAACATTCTACTA
GAAGAAAATGGAGTTGTGGCAGAATGCAACATTAAAACTATGGAGGCGTTTGAAATATTG
GACTTTGATTTTTCAAGCAGTAATATCTCAGATAAATTCATAATGAAGTCAGAATGTATG
CGTGAAGCGTTCAACGAACTTGATACTTCAAGTGAAATCTTGGAAGTTGCTGTAATACCA
CCTCCAGCTGTTCAGTCTCGTCTTCGTTTAACGACGTATGGTTTCGCTGGGACTATGCAT
TNTGACTTACCTCGATCATCTGACCAAGTGGAAGTTTTTGAATCTGCAGCTGCAAGTCCT
C

clustalw multiple alignements is not computed in this case