cluster # 3176

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Schistosoma mansoni
cluster # 3176 cluster # 3176 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3176#0 length = 509 sequences # 2

consensusID : consensus_3176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 509
fasta sequence

                              [CTTCGAAACTGGGGGAGGTCTACATTATGAACAAACTTCATTTAAGTTGTTACCATCATACTGGTTAAAAGTGTTCATTGCTAACACAGTAGATTTGTGGAGATTGTTTGGTTTGTAGTTTACATAATGAATTAACTTAGACTAGACAGTTATTAAAAACCAGGAAACATGACAGATATTTCGTTTTAATGTCAAAATCCTCATCAATGAGTGTCCACAAACCCACCAAGGGTCGAAAACAGGTTTTCCAAGCCACAGTCATGTTTCTTGGACTAAACAACTTCTTAGGAATTTGTGGTTTTCAGTGCTTGTTTAAGTGGGAACATTTCATGAAGCTAACTAAAAACAAACAATCATATTATGCCTAGAATTAATTTTCATCACTGACCGGCATCAGGCGTAGAAGCATTGACAACTAAGCAGTGTATTACTTTTCAGTAGTGGAAACTCACAAACTCTGGAAGCGAACACGATACCCGTAAATCATTATGTAGATATCCAGTATTTAA]

[+] EMBL CD115714             [CTTCGAAACTGGGGGAGGTCTACATTATGAACAAACTTCATTTAAGTTGTTACCATCATACTGGTTAAAAGTGTTCATTGCTAACACAGTAGATTTGTGGAGATTGTTTGGTTTGTAGTTTACATAATGAATTAACTTAGACTAGACAGTTATTAAAAACCAGGAAACATGACAGATATTTCGTTTTAATGTCAAAATCCTCATCAATGAGTGTCCACAAACCCACCAAGGGTCGAAAACAGGTTTTCCAAGCCACAGTCATGTTTCTTGGACTAAACAACTTCTTAGGAATTTGTGGTTTTCAGTGCTTGTTTAAGTGGGAACATTTCATGAAGCTAACTAAAAACAAACAATCATATTATGCCTAGAATTAATTTTCATCACTGACCGGCATCAGGCGTAGAAGCATTGACAACTAAGCAGTGTATTACTTTTCAGTAGTGGAAACTCACAAACTCTGGAAGCGAACACGATACCCGTAAATCATTATGTAGATATCCAGTATTTAA]
[-] EMBL CD116243             [ TTCGAAACTGGGCGAGGTTTACATTATGAACAGGCTTCATTTAAGTTTTTCCCATCACACTGGTTAACAGTGTTCATTGCTAACACAGTAGATTTGTGGAGATTGTATGGTTTGAAGTGTACATAATGAATCAACTTAGACTAGACAGTTATTACAAACCAGTAATCATGACAGATATTTCGTTTTAATGTCGGAATCCTCATCAATGAGTGTCCTCAAACCCACCAAGGGTCGAAAACAGGTTCTCCAAGCCACAGTCATGTTTCTTGGACTAAACAACTTCTTAGGAATTTGTGGTTTTCAGTGCTTGTTTAAGTGGGAACATTTCATGAAGCTAAGTAAAACCAAACAATCATATTATGCCTAGCATTAAgt                                                                                                                                     ]




>consensus_3176#0
CTTCGAAACTGGGGGAGGTCTACATTATGAACAAACTTCATTTAAGTTGTTACCATCATA
CTGGTTAAAAGTGTTCATTGCTAACACAGTAGATTTGTGGAGATTGTTTGGTTTGTAGTT
TACATAATGAATTAACTTAGACTAGACAGTTATTAAAAACCAGGAAACATGACAGATATT
TCGTTTTAATGTCAAAATCCTCATCAATGAGTGTCCACAAACCCACCAAGGGTCGAAAAC
AGGTTTTCCAAGCCACAGTCATGTTTCTTGGACTAAACAACTTCTTAGGAATTTGTGGTT
TTCAGTGCTTGTTTAAGTGGGAACATTTCATGAAGCTAACTAAAAACAAACAATCATATT
ATGCCTAGAATTAATTTTCATCACTGACCGGCATCAGGCGTAGAAGCATTGACAACTAAG
CAGTGTATTACTTTTCAGTAGTGGAAACTCACAAACTCTGGAAGCGAACACGATACCCGT
AAATCATTATGTAGATATCCAGTATTTAA

clustalw multiple alignements is not computed in this case