cluster # 3180

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Schistosoma mansoni
cluster # 3180 cluster # 3180 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3180#0 length = 611 sequences # 2

consensusID : consensus_3180#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 611
fasta sequence

                              [ATGGCACGTTGTATAACGATTTTCGACGTCTTAAGTTCCAGGATAAAATGGGAAATTTCAGTTTGATTTACATGGATGATTTTATTGATCAACTTCTTACTGAGGAACGTGTCTGTGATGTTATTTTACCTCGTTTACAAAAACGTGAAGTTCTTGAGGAGCTAAATGGTTTAG-AACCACGACAATCACTTCTAAATGAAGACTTAGAAGATTTACAATATGTTGAGGAGCTGGACACCTTAAATCATATTGAAGAGAGTTATCAGTCTAAGGATAAAGAAAAATATAGGAGACGAGATTATGGAAAAGACCACCATCATCGACGTA-GACATCGTGAAGAATCTCCTCATGCTGAACGTAGAGAAAGATATAGAGACCATATATCATCAAGACATATAGATCGTGAAGACAATGAACGCATACACGATCGTGATTAAGCTCATAGACGTAGTCATTCTGGA-GATCGTCGAAATGCTCGATCCATACGTGATGATAGTCGTTCGCCAGATCATAAACGTACTCGAGATAANGTCGTGAANCGACGACATTAATTGTTGAGTAGGCTGATCNATTGNTTATACTATGTTAAATAAATACTTGGTGGGATTANA]

[+] EMBL CD115740             [ATGGCACGTTGTATAACGATTTTCGACGTCTTAAGTTCCAGGATAAAATGGGAAATTTCAGTTTGATTTACATGGATGATTTTATTGATCAACTTCTTACTGAGGAACGTGTCTGTGATGTTATTTTACCTCGTTTACAAAAACGTGAAGTTCTTGAGGAGCTAAATGGTTTAG AACCACGACAATCACTTCTAAATGAAGACTTAGAAGATTTACAATATGTTGAGGAGCTGGACACCTTAAATCATATTGAAGAGAGTTATCAGTCTAAGGATAAAGAAAAATATAGGAGACGAGATTATGGAAAAGACCACCATCATCGACGTA GACATCGTGAAGAATCTCCTCATGCTGAACGTAGAGAAAGATATAGAGACCATATATCATCAAGACATATAGATCGTGAAGACAATGAACGCATACACGATCGTGATTAAGCTCATAGACGTAGTCATTCTGGA GATCGTCGAAATGCTCGATCCATACGTGATGATAGTCGTTCGC                                                                                                           ]
[+] EMBL SM693                [                                                                                                                                                         cgagGGAGCTANNTGGTTTAGNAACCACGACANTCACTTCTAAATGAAGACTTAGAAGATTTACAATATGTTGAGGAGCTGGACACCTTATATCATATTGANGAGAGTTATNAGTCTAAGGATAAAGAAAANTATAGGAGACGAGATTATGGAAAAGACCACCATCATCGACGTAGGACATCGGGAAGANTCTCCTCATGCTGAACGTAGAGAAAGAGATAGAGACCATNTATCATCAAGACATAACGATCGTGAAGACAATGAACGCAAACACGATCGTGATAAAGCTCATAGACGTAGTCATTCTGGAGGATCGTCGAAATGCTCGATCCAAACGNGATGATAGTCGTTCGNCAGATCATAAACGTACTCGAGATAANGTCGTGAANCGACGACATTAATTGTTGAGTAGGCTGATCNATTGNTTATACTATGTTAAATAAATACTTGGTGGGATTANA]




>consensus_3180#0
ATGGCACGTTGTATAACGATTTTCGACGTCTTAAGTTCCAGGATAAAATGGGAAATTTCA
GTTTGATTTACATGGATGATTTTATTGATCAACTTCTTACTGAGGAACGTGTCTGTGATG
TTATTTTACCTCGTTTACAAAAACGTGAAGTTCTTGAGGAGCTAAATGGTTTAGAACCAC
GACAATCACTTCTAAATGAAGACTTAGAAGATTTACAATATGTTGAGGAGCTGGACACCT
TAAATCATATTGAAGAGAGTTATCAGTCTAAGGATAAAGAAAAATATAGGAGACGAGATT
ATGGAAAAGACCACCATCATCGACGTAGACATCGTGAAGAATCTCCTCATGCTGAACGTA
GAGAAAGATATAGAGACCATATATCATCAAGACATATAGATCGTGAAGACAATGAACGCA
TACACGATCGTGATTAAGCTCATAGACGTAGTCATTCTGGAGATCGTCGAAATGCTCGAT
CCATACGTGATGATAGTCGTTCGCCAGATCATAAACGTACTCGAGATAANGTCGTGAANC
GACGACATTAATTGTTGAGTAGGCTGATCNATTGNTTATACTATGTTAAATAAATACTTG
GTGGGATTANA

clustalw multiple alignements is not computed in this case