These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3354#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 174 fasta sequence [AAAATTAATTGACGAAAGAATAATATTTTTTCATTGAATGGGACATTTACTTGTCCAGGGGCTTGTTCTACGGCTAACATATATAATGCTACGTCACGTTTTTCCACAAATTCCATGATTAATTTAACTACATCTGCTTCGTATATTGAAAGTTGAACTTTCTCATGTTTTGGT] [+] EMBL CD167066 [AAAATTAATTGACGAAAGAATAATATTTTTTCATTGAATGGGACATTTACTTGTCCAGGGGCTTGTTCTACGGCTAACATATATAATGCTACGTCACGTTTTTCCACAAATTCCATGATTAATTTAACTACATCTGCTTCGTATATTGAAAGTTGAACTTTCTCATGTTTTGGT] consensusID : consensus_3354#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 174 fasta sequence [CAAATTAATTGACGAAAGAATAATATGTTTTCATTGAATGGTCCATTTACTTGTGCAGGGGGTTGTTCTACGGCTAACATACAGATTGCTAGGTCACGTTTTTCCAGAAATTCCAAGATTAATTTAACTACATCTGCTTCGTATATCGTTAGTCGAACTTTCTCATGTTTTGGT] [+] EMBL CD167067 [CAAATTAATTGACGAAAGAATAATATGTTTTCATTGAATGGTCCATTTACTTGTGCAGGGGGTTGTTCTACGGCTAACATACAGATTGCTAGGTCACGTTTTTCCAGAAATTCCAAGATTAATTTAACTACATCTGCTTCGTATATCGTTAGTCGAACTTTCTCATGTTTTGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3354#0 AAAATTAATTGACGAAAGAATAATATTTTTTCATTGAATGGGACATTTACTTGTCCAGGG 60 consensus_3354#1 CAAATTAATTGACGAAAGAATAATATGTTTTCATTGAATGGTCCATTTACTTGTGCAGGG 60 ************************* ************** *********** ***** consensus_3354#0 GCTTGTTCTACGGCTAACATATATAATGCTACGTCACGTTTTTCCACAAATTCCATGATT 120 consensus_3354#1 GGTTGTTCTACGGCTAACATACAGATTGCTAGGTCACGTTTTTCCAGAAATTCCAAGATT 120 * ******************* * * ***** ************** ******** **** consensus_3354#0 AATTTAACTACATCTGCTTCGTATATTGAAAGTTGAACTTTCTCATGTTTTGGT 174 consensus_3354#1 AATTTAACTACATCTGCTTCGTATATCGTTAGTCGAACTTTCTCATGTTTTGGT 174 ************************** * *** ******************** |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||