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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 3354 cluster # 3354       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3354#0 length = 174 sequences # 1  
consensus_3354#1 length = 174 sequences # 1  

consensusID : consensus_3354#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 174
fasta sequence
                              [AAAATTAATTGACGAAAGAATAATATTTTTTCATTGAATGGGACATTTACTTGTCCAGGGGCTTGTTCTACGGCTAACATATATAATGCTACGTCACGTTTTTCCACAAATTCCATGATTAATTTAACTACATCTGCTTCGTATATTGAAAGTTGAACTTTCTCATGTTTTGGT]

[+] EMBL CD167066             [AAAATTAATTGACGAAAGAATAATATTTTTTCATTGAATGGGACATTTACTTGTCCAGGGGCTTGTTCTACGGCTAACATATATAATGCTACGTCACGTTTTTCCACAAATTCCATGATTAATTTAACTACATCTGCTTCGTATATTGAAAGTTGAACTTTCTCATGTTTTGGT]


>consensus_3354#0 AAAATTAATTGACGAAAGAATAATATTTTTTCATTGAATGGGACATTTACTTGTCCAGGG GCTTGTTCTACGGCTAACATATATAATGCTACGTCACGTTTTTCCACAAATTCCATGATT AATTTAACTACATCTGCTTCGTATATTGAAAGTTGAACTTTCTCATGTTTTGGT



consensusID : consensus_3354#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 174
fasta sequence
                              [CAAATTAATTGACGAAAGAATAATATGTTTTCATTGAATGGTCCATTTACTTGTGCAGGGGGTTGTTCTACGGCTAACATACAGATTGCTAGGTCACGTTTTTCCAGAAATTCCAAGATTAATTTAACTACATCTGCTTCGTATATCGTTAGTCGAACTTTCTCATGTTTTGGT]

[+] EMBL CD167067             [CAAATTAATTGACGAAAGAATAATATGTTTTCATTGAATGGTCCATTTACTTGTGCAGGGGGTTGTTCTACGGCTAACATACAGATTGCTAGGTCACGTTTTTCCAGAAATTCCAAGATTAATTTAACTACATCTGCTTCGTATATCGTTAGTCGAACTTTCTCATGTTTTGGT]


>consensus_3354#1 CAAATTAATTGACGAAAGAATAATATGTTTTCATTGAATGGTCCATTTACTTGTGCAGGG GGTTGTTCTACGGCTAACATACAGATTGCTAGGTCACGTTTTTCCAGAAATTCCAAGATT AATTTAACTACATCTGCTTCGTATATCGTTAGTCGAACTTTCTCATGTTTTGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3354#0      AAAATTAATTGACGAAAGAATAATATTTTTTCATTGAATGGGACATTTACTTGTCCAGGG 60
consensus_3354#1      CAAATTAATTGACGAAAGAATAATATGTTTTCATTGAATGGTCCATTTACTTGTGCAGGG 60
                       ************************* **************  *********** *****

consensus_3354#0      GCTTGTTCTACGGCTAACATATATAATGCTACGTCACGTTTTTCCACAAATTCCATGATT 120
consensus_3354#1      GGTTGTTCTACGGCTAACATACAGATTGCTAGGTCACGTTTTTCCAGAAATTCCAAGATT 120
                      * ******************* * * ***** ************** ******** ****

consensus_3354#0      AATTTAACTACATCTGCTTCGTATATTGAAAGTTGAACTTTCTCATGTTTTGGT 174
consensus_3354#1      AATTTAACTACATCTGCTTCGTATATCGTTAGTCGAACTTTCTCATGTTTTGGT 174
                      ************************** *  *** ********************




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)