Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 3555 cluster # 3555       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3555#0 length = 449 sequences # 2  

consensusID : consensus_3555#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 449
fasta sequence
                              [CAGTCATACTACATGTTTCTACTATGAAAATGATTTCTGTTTGCTTGAATCAAGTAATTACTCTCGATTTTTGTTTTAAAAGTTGTTGTAGAAAGCGTGTACTAAATTCAATGCATATGTTGAATAATGCTTAGCGTAACTCCTTTGTAGAAGCCATACACTTTCAGCGGCCGATTGGTCTGAAGTAAGTGGGCTACATAGCTGCATTGTATACAACACGAAAGAATCCCAGGATTTGGCTATTCTGTTTGGTGTACTTTCATCCCGCTGTAAATGAAAACTGTTGTTAGAAGAACACTTGTATTTTCATGTATTTTGACGGAATATATCACTGAACAGACTTAGTTTTTAGTGTCCACTCATCATCATAATTTGCTTACCTGTGAGATGTCTTTACAAATAATACTTACTCATCATTCTAGT-CTTTGAAACTTCCAATAATTCTGTCC]

[+] EMBL CD122407             [CAGTCATACTACATGTTTCTACTATGAAAATGATTTCTGTTTGCTTGAATCAAGTAATTACTCTCGATTTTTGTTTTAAAAGTTGTTGTAGAAAGCGTGTACTAAATTCAATGCATATGTTGAATAATGCTTAGCGTAACTCCTTTGTAGAAGCCATACACTTTCAGCGGCCGATTGGTCTGAAGTAAGTGGGCTACATAGCTGCATTGTATACAACACGAAAGAATCCCAGGATTTGGCTATTCTGTTTGGTGTACTTTCATCCCGCTGTAAATGAAAACTGTTGTTAGAAGAACACTTGTATTTTCATGTATTTTGACGGAATATATCACTGAACAGACTTAGTTTTTAGTGTCCACTCATCATCATAATTTGCTTACCTGTGAGATGTCTTTACAAATAATACTTACTCATCATTCTAGT CTTTGAAACTTCCAATAATTCTGTCC]
[-] EMBL CD122331             [ AGTCAGACTACATGTTTCTACTATGAAAATGATTTCTGTTTGCTTGAATCAAGTAATTACTCTCGATTTTTGTTTTAAAAGTTGTTGTAGAAAGCGTGTACTAAATTCAATGCATATGTTGAATAATGCTTAGCGTAACTCCTTTGTAGAAGCCATACACTTTCAGCGGCCGATTGGTCTGAAGTAAGTGGGCTACAGAGCTGCATTGTATACAACACGAAAGAATCCCAGGATTTGGCTATTCTGTTTGGTGTACTTTCATCCCGCTGTAAATGAAAACTGTTGTTAGAAGAACACTTGTATTTTCATGTATTTTGACGGAATATATCACTGAACAGACTTAGTTTTTAGTGTCCACTCATCATCATAATTTGCTTACCTGTGAGATGTCTTTACAAATAATACTTACTCATCATTCTAGTGCTTTGAAACTTCCAATAATTCTGTC ]


>consensus_3555#0 CAGTCATACTACATGTTTCTACTATGAAAATGATTTCTGTTTGCTTGAATCAAGTAATTA CTCTCGATTTTTGTTTTAAAAGTTGTTGTAGAAAGCGTGTACTAAATTCAATGCATATGT TGAATAATGCTTAGCGTAACTCCTTTGTAGAAGCCATACACTTTCAGCGGCCGATTGGTC TGAAGTAAGTGGGCTACATAGCTGCATTGTATACAACACGAAAGAATCCCAGGATTTGGC TATTCTGTTTGGTGTACTTTCATCCCGCTGTAAATGAAAACTGTTGTTAGAAGAACACTT GTATTTTCATGTATTTTGACGGAATATATCACTGAACAGACTTAGTTTTTAGTGTCCACT CATCATCATAATTTGCTTACCTGTGAGATGTCTTTACAAATAATACTTACTCATCATTCT AGTCTTTGAAACTTCCAATAATTCTGTCC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)