These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3692#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 222 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCGTTGAAACATGGGAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAGTGGTGGTTGGGAATGGCGGTGGCGCAGCGGTTCGG] [+] EMBL AI394988 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCGTTGAAACATGGGAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAGTGGTGGTTGGGAATGGCGGTGGCGCAGCGGTTCGG] consensusID : consensus_3692#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 164 fasta sequence [GAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAAGTGGTGGTGGTGGNATNNNNNNNNNNN] [+] EMBL CD073185 [GAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAAGTGGTGGTGGTGGNATNNNNNNNNNNN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3692#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCGTTGAAACATGGGAAAATATAT 60 consensus_3692#1 --------------------------------------------------GAAAATATAT 10 ********** consensus_3692#0 TTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATA 120 consensus_3692#1 TTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATA 70 ************************************************************ consensus_3692#0 TTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGG 180 consensus_3692#1 TTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGG 130 ************************************************************ consensus_3692#0 GGGGGA-GTGGTGGTTG-GGAATGGCGGTGGCGCAGCGGTTCGG 222 consensus_3692#1 GGGGGAAGTGGTGGTGGTGGNATNNNNNNNNNNN---------- 164 ****** ******** * ** ** |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||