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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 3692 cluster # 3692       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3692#0 length = 222 sequences # 1  
consensus_3692#1 length = 164 sequences # 1  

consensusID : consensus_3692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 222
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCGTTGAAACATGGGAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAGTGGTGGTTGGGAATGGCGGTGGCGCAGCGGTTCGG]

[+] EMBL AI394988             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCGTTGAAACATGGGAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAGTGGTGGTTGGGAATGGCGGTGGCGCAGCGGTTCGG]


>consensus_3692#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCGTTGAAACATGGGAAAATATAT TTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATA TTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGG GGGGGAGTGGTGGTTGGGAATGGCGGTGGCGCAGCGGTTCGG



consensusID : consensus_3692#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 164
fasta sequence
                              [GAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAAGTGGTGGTGGTGGNATNNNNNNNNNNN]

[+] EMBL CD073185             [GAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGGGGGGGAAGTGGTGGTGGTGGNATNNNNNNNNNNN]


>consensus_3692#1 GAAAATATATTTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTA TTGACAAATATTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGC AGGTGTTGGGGGGGGAAGTGGTGGTGGTGGNATNNNNNNNNNNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3692#0      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCGTTGAAACATGGGAAAATATAT 60
consensus_3692#1      --------------------------------------------------GAAAATATAT 10
                                                                        **********

consensus_3692#0      TTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATA 120
consensus_3692#1      TTGAGATAGTAGCTAGTTGACACAAAGGTACAAGAGAAAAAGCACACTTATTGACAAATA 70
                      ************************************************************

consensus_3692#0      TTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGG 180
consensus_3692#1      TTACCCAACTATTCTCTCGGTCTTTTTGCTTCCGGTTCCCCATCATTAGCAGGTGTTGGG 130
                      ************************************************************

consensus_3692#0      GGGGGA-GTGGTGGTTG-GGAATGGCGGTGGCGCAGCGGTTCGG 222
consensus_3692#1      GGGGGAAGTGGTGGTGGTGGNATNNNNNNNNNNN---------- 164
                      ****** ******** * ** **                     




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)