These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4023#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 203 fasta sequence [TAGACAAGGAGAAAACCAGCTCACTATTCTGTTATTACATTATGGGGAGAATAATGGACATCACCACTACATTTAGTAGGTGCACAACTAGGAAAAATTGAGTGTACACTGAGGTACCATGATTTATTTGCAATTTTACAGCAAAGCTTGGTTGAAATGCCATAAATTCCACCCATAGATTAAAGATTAAAATTAACTGTTAT] [+] EMBL AI026205 [TAGACAAGGAGAAAACCAGCTCACTATTCTGTTATTACATTATGGGGAGAATAATGGACATCACCACTACATTTAGTAGGTGCACAACTAGGAAAAATTGAGTGTACACTGAGGTACCATGATTTATTTGCAATTTTACAGCAAAGCTTGGTTGAAATGCCATAAATTCCACCCATAGATTAAAGATTAAAATTAACTGTTAT] consensusID : consensus_4023#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 186 fasta sequence [AATAGACAAAGGAAAGAAAAACCAAGCTCAACTAATTCTGGTTAATTAACATTAATGGGGAGAAATAAATGGACATCACCACTACATTTAGTAGGTGCACAACTAGGAAAAATTGAGTGTTCACTGAGGTACCATGATTTATTTGCATTTTTACAGCAAAGCTTGGTTGAAATACCATAAATTCCA] [+] EMBL AI026206 [AATAGACAAAGGAAAGAAAAACCAAGCTCAACTAATTCTGGTTAATTAACATTAATGGGGAGAAATAAATGGACATCACCACTACATTTAGTAGGTGCACAACTAGGAAAAATTGAGTGTTCACTGAGGTACCATGATTTATTTGCATTTTTACAGCAAAGCTTGGTTGAAATACCATAAATTCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4023#0 -------TAGACAAGGAGAAAACCAGCTCACT--ATTCTGTT--ATTA-CATTA-TGGGG 47 consensus_4023#1 AATAGACAAAGGAAAGAAAAACCAAGCTCAACTAATTCTGGTTAATTAACATTAATGGGG 60 * ** ** *** * ****** ****** * **** ***** ***** consensus_4023#0 AGAAT--AATGGACATCACCACTACATTTAGTAGGTGCACAACTAGGAAAAATTGAGTGT 105 consensus_4023#1 AGAAATAAATGGACATCACCACTACATTTAGTAGGTGCACAACTAGGAAAAATTGAGTGT 120 **** ***************************************************** consensus_4023#0 ACACTGAGGTACCATGATTTATTTGCAATTTTACAGCAAAGCTTGGTTGAAATGCCATAA 165 consensus_4023#1 TCACTGAGGTACCATGATTTATTTGCATTTTTACAGCAAAGCTTGGTTGAAATACCATAA 180 ************************** ************************* ****** consensus_4023#0 ATTCCACCCATAGATTAAAGATTAAAATTAACTGTTAT 203 consensus_4023#1 ATTCCA-------------------------------- 186 ****** |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||