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Schistosoma mansoni
cluster # 4109 cluster # 4109       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4109#0 length = 1179 sequences # 3  

consensusID : consensus_4109#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1179
fasta sequence
                              [CCAATTTCGTTGCCTGTCTAAATTTATCGTATAAATCCCTCCCTGTTTTGGTGTATCAGATAACCAGCAAATTTCGAGATGAACCTCACCCTAAACACGGTCTAGTCAGGGGACGTGAGTTTTTAATGCAAGACATTTACACATTTGATGCTTCTGTCGAAACGGCTGAGAAAACGTATAAACGTGTAAAGACTGCATATTCTGACTTGATGGTTAACCTTGAGTTACCATACCTAGTTGCATGTGCAGATCCAGGTAATGTTGGTGGTCTCATTTCAGAGGAATTTCACGTTGAAGCTGATATAGGAGAAGACCGAATATTAACGTGCTCAAAATGCTCCTTGAAATTCAATTCTGAACTTGAAGGTATTTATCATTATGAAGGAAATTACTTACAGGTGAAGTTACCAGCTCCCTCTGTTCCTTACAATCTTGCCCAAAAGTATTCCATGAAGTTCAAGGTATAGAAGTCGCCCACTGTTTCCTATTGGGAGAGCGATATTCANAGTGCTTTGATGCCACTTATCGATCCCCTTCAGGCTCGAAACTTATGTTCATGGGGTGCTATGGTCTTGGATATCACGTTTACTTGCCGTCTGCATCGAACACTTTGAC-AGAGTTGCATTTCCTGACAAGTCCAAAGATCAGATCACACAGCTTCGATGGCCTGTTCGGATCGCACCATACAGCGGAGCAATAGTTCTACAGAAGGAAATGGCCAAGGATAGTGTGAATCCAGATGAACTGAAATATATTCTCGATACCATTCAAAGTGACTCCATCAACTTCAAATTACCTGGTGACATTTTGGTGGATGATCGCATGGGATTAAGCTTGGGTAGAAAAATTCTGGACCAAAGCCGCTTAGGAATACCCTGGATACTTACTGTAAAGAGTCAGAGAGATGGCACATATGAATTGATTGATGTTTATAAAGATAGATCATGTGTAGCCACTCTAGAACAAGCCAGATCTGCATTCAATAACCCTGCAGTATTTGATGCATCATCTCTCCCTTCTTGGAATAACCACAATGAGCGCAATATAAATGGCAACAAACTCGTTTAACTTGGTTAGCGCATACAAAACAAGTAAAGTTAAAAACTGTAATATAATTTAAAAACTAAAGAAATATGTACAATAAAAACTTGTTTGACAATTCAAAAAAAAAAAAAAAAA]

[+] EMBL CD078409             [CCAATTTCGTTGCCTGTCTAAATTTATCGTATAAATCCCTCCCTGTTTTGGTGTATCAGATAACCAGCAAATTTCGAGATGAACCTCACCCTAAACACGGTCTAGTCAGGGGACGTGAGTTTTTAATGCAAGACATTTACACATTTGATGCTTCTGTCGAAACGGCTGAGAAAACGTATAAACGTGTAAAGACTGCATATTCTGACTTGATGGTTAACCTTGAGTTACCATACCTAGTTGCATGTGCAGATCCAGGTAATGTTGGTGGTCTCATTTCAGAGGAATTTCACGTTGAAGCTGATATAGGAGAAGACCGAATATTAACGTGCTCAAAATGCTCCTTGAAATTCAATTCTGAACTTGAAGGTATTTATCATTATGAAGGAAATTACTTACAGGTGAAGTTACCAGCTCCCTCTGTTCCTTACAATCTTGCCCAAAAGTATTCCATGAAGTTCAAGGTATAGAAGTCGCCCACTGTTTCCTATTGGGAGAGCGATATTCANAGTGCTTTGATGCCACTTATCGATCCCCTTCAGGCTCGAAACTTATGTTCATGGGGTGCTATGGTCTTGGATATCACGTTTACTTGCCGTCTGCATCGAACACTTTGAC AGAGTTGCATTTCCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD076410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gaATATCACGTTTACTTGCCGTCTGCATCGAACAC TTGACAAGAGTTGCATTTCCTGACAAGTCCAAAGATCAGATCACACAGCTTCGATGGCCTGTTCGGATCGCACCATACAGCGGAGCAATAGTTCTACAGAAGGAAATGGCCAAGGATAGTGTGAATCCAGATGAACTGAAATATATTCTCGATACCATTCAAAGTGACTCCATCAACTTCAAATTACCTGGTGACATTTTGGTGGATGATCGCATGGGATTAAGCTTGGGTAGAAAAATTCTGGACCAAAGCCGCTTAGGAATACCCTGGATACTTACTGTAAAGAGTCAGAGAGATGGCACATATGAATTGATTGATGTTTATAAAGATAGATCATGTGTAGCCACTCTAGAACAAGCCAGATCTGCATTCAATAACCCTGCAGTATTTGATGCATCATCTCTCCCTTCTTGGAATAACCACAATGAGCGCAATATAAATGGCAACAAACTCGTTTAACTTGGTTAGCGCATACAAAACAAGTAAAGTTAAAAACTGTAATATAATTTAAAAACTAAAGAAATATGTACAATAAAAACTTGTT                          ]
[-] EMBL AI395622             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              caAACTT AAAATACCTGGTGACATTTTGGTGGATGATCGCATGGGATT AGCTTGGGTAG AAAATTCTGGACCAAAGCCGCTTAGGAATACCCTGGATACTTACTGTAAAGAGTCAGAGAGATGGCACATATGAATTGATTGATGTTTATAAAGATAGATCATGTGTAGCCACTCTAGAACAAGCCAGATCTGCATTCAATAACCCTGCAGTATTTGATGCATCATCTCTCCCTTCTTGGAATAACCACAATGAGCGCAATATAAATGGCAACAAACTCGTTTAACTTGGTTAGCGCATACAAAACAAGTAAAGTTAAAAACTGTAATATAATTTAAAAACTAAAGAAATATGTACAATAAAAACTTGTTTGACAATTCAAAAAAAAAAAAAAAAA]


>consensus_4109#0 CCAATTTCGTTGCCTGTCTAAATTTATCGTATAAATCCCTCCCTGTTTTGGTGTATCAGA TAACCAGCAAATTTCGAGATGAACCTCACCCTAAACACGGTCTAGTCAGGGGACGTGAGT TTTTAATGCAAGACATTTACACATTTGATGCTTCTGTCGAAACGGCTGAGAAAACGTATA AACGTGTAAAGACTGCATATTCTGACTTGATGGTTAACCTTGAGTTACCATACCTAGTTG CATGTGCAGATCCAGGTAATGTTGGTGGTCTCATTTCAGAGGAATTTCACGTTGAAGCTG ATATAGGAGAAGACCGAATATTAACGTGCTCAAAATGCTCCTTGAAATTCAATTCTGAAC TTGAAGGTATTTATCATTATGAAGGAAATTACTTACAGGTGAAGTTACCAGCTCCCTCTG TTCCTTACAATCTTGCCCAAAAGTATTCCATGAAGTTCAAGGTATAGAAGTCGCCCACTG TTTCCTATTGGGAGAGCGATATTCANAGTGCTTTGATGCCACTTATCGATCCCCTTCAGG CTCGAAACTTATGTTCATGGGGTGCTATGGTCTTGGATATCACGTTTACTTGCCGTCTGC ATCGAACACTTTGACAGAGTTGCATTTCCTGACAAGTCCAAAGATCAGATCACACAGCTT CGATGGCCTGTTCGGATCGCACCATACAGCGGAGCAATAGTTCTACAGAAGGAAATGGCC AAGGATAGTGTGAATCCAGATGAACTGAAATATATTCTCGATACCATTCAAAGTGACTCC ATCAACTTCAAATTACCTGGTGACATTTTGGTGGATGATCGCATGGGATTAAGCTTGGGT AGAAAAATTCTGGACCAAAGCCGCTTAGGAATACCCTGGATACTTACTGTAAAGAGTCAG AGAGATGGCACATATGAATTGATTGATGTTTATAAAGATAGATCATGTGTAGCCACTCTA GAACAAGCCAGATCTGCATTCAATAACCCTGCAGTATTTGATGCATCATCTCTCCCTTCT TGGAATAACCACAATGAGCGCAATATAAATGGCAACAAACTCGTTTAACTTGGTTAGCGC ATACAAAACAAGTAAAGTTAAAAACTGTAATATAATTTAAAAACTAAAGAAATATGTACA ATAAAAACTTGTTTGACAATTCAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)