Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 417 cluster # 417       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_417#0 length = 495 sequences # 2  

consensusID : consensus_417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 495
fasta sequence
                              [CAAGGACCCA-TCAGTCT-CGC-GCGC-GAGA-TTA-TGATT-AGATTAT-GATAAA-TATTTTAT-AGAATACATATGA-GAGAAATAAAA--TTAAAAT--AAAAAGAAACTGTCTATTGTAATC-TTAAAAGAAATTATCTCCACTCACCTTGATTTATATCATTGGACAGTTTACTACTACTAGGTGGTTAGAAAGTTATCAAGAATCTAAACAAAATGATAATTTTGACAGAAAGAATGAGAACTGAGACACAATCGATTGATTAAATTCTCCACATATAAATCTATACTGAATTGCCCAAAAACTACACACAGACTATACGTGTTGAAATTCTTTCTGCAAGAATGCTGATACAAATATCCTTCCCCACTCAAAATTCAACACAGTTAACAAATCATCATATG-ATTTACAAATAATTTCTCAACCACACAATACGGAAATTAATTCGGTCAAATACCATAAACGACATTCGCCCATACAAATTATACAGATTATGAATCACTCAT]

[+] EMBL AI740362             [  AGGACCCA TCAGTCT CGC GCGC GAGA TTA TGATT AGATTAT GATAAA TATTTTAT AGAATACATATGA GAGAAATAAAA  TTAAAAT  AAAAAGAAACTGTCTATTGTAATC TTAAAAGAAATTATCTCCACTCACCTTGATTTATATCATTGGACAGTTTACTACTACTAGGTGGTTAGAAAGTTATCAAGAATCTAAACAAAATGATAATTTTGACAGAAAGAATGAGAACTGAGACACAATCGATTGATTAAATTCTCCACATATAAATCTATACTGAATTGCCCAAAAACTACACACAGACTATACGTGTTGAAATTCTTTCTGCAAGAATGCTGATACAAATATCCTTCCCCACTCAAAATTCAACACAGTTAACAAATCATCATATG ATTTACAAATAATTTCTCAACCACACAATACGGAAATTAATTCGGTCAAATACCATAAACGACATTCGCCCATACAAATTATACAGATTATGAATCACTCAT]
[+] EMBL AI740350             [cagtGACCCATTCAGTCTCCGCTGCGCTGAGATTTATTGATTAAGATTATGGATAAATTATTTTATAAGAATACATATGATGAGAAATAAAAATTTAAAATAAAAAAAGAAACTGTCTATTGTAATCTTTAAAAGAAATTATCTCCACTCACCTTGATTTATATCATTGGACAGTTTACTACTACTAGGTGGTTAGAAAGTTATCAGGAATCTAAACAAAATGATAATTTTGACAGAAAGAATGAGAACTGAGACACAATCGATTGATTAAATTCTCCACATATAAATCTATACTGAATTGCCCAAAAACTACACACAGACTATACGTGTTGAAATTCTTTCTGCAAGAATGCTGATACAAATATCCTTCCCCACTCAAAATTCAACACAGTTAACAATTCATCATATGAATTTACAATTAATTTCTCAA CACACAtaggt                                                                      ]


>consensus_417#0 CAAGGACCCATCAGTCTCGCGCGCGAGATTATGATTAGATTATGATAAATATTTTATAGA ATACATATGAGAGAAATAAAATTAAAATAAAAAGAAACTGTCTATTGTAATCTTAAAAGA AATTATCTCCACTCACCTTGATTTATATCATTGGACAGTTTACTACTACTAGGTGGTTAG AAAGTTATCAAGAATCTAAACAAAATGATAATTTTGACAGAAAGAATGAGAACTGAGACA CAATCGATTGATTAAATTCTCCACATATAAATCTATACTGAATTGCCCAAAAACTACACA CAGACTATACGTGTTGAAATTCTTTCTGCAAGAATGCTGATACAAATATCCTTCCCCACT CAAAATTCAACACAGTTAACAAATCATCATATGATTTACAAATAATTTCTCAACCACACA ATACGGAAATTAATTCGGTCAAATACCATAAACGACATTCGCCCATACAAATTATACAGA TTATGAATCACTCAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)