cluster # 4178

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Schistosoma mansoni
cluster # 4178 cluster # 4178 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4178#0 length = 719 sequences # 3

consensusID : consensus_4178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 719
fasta sequence

                              [GTATAAACAAACGTAAGAATCATTCGAAGAAAACCAATGATTAGTCCGTAAATGAGACCGAAAAAAGCGCCCTTTTCACTACACCGTTTCCATAGTATAGCGCATAAAAATACTGATGCTATAGGAGGTGTAAGGTAGGCAGCAATCGCTTGAATATAGATATACAGTTCACTTCCTTGAGACTGTTGCATTATTGGAATCCATGCAACACTTAGCCCGACTAGTACTGCGATAAACACACAGAAGGCATTAGATCAATCACAAGTTTTGGATATGCCATATTTGAACAACCATTACGATGTCCACAAACTTTAAGGCAATCAGAACCAGGGAAGCAACCAATCTCATTTGGATATAATACGCGGCTTATCATTCCTGGAATAACCATAATAAAAATTGGAATTTGTTTTATTAATCCAGTCATTAATGTTGCACCTTGTGCATGCGATAAACTCTNTGCTGCCAATGTACGCTGAACTATCATTTAATATCGTTAGCACAGTGGCACCAAAGATCATGACGAANAACTGAAGGGTGTCAGTATACAGAACAGCAGCAAGTCCACCTGTTACTGTAATAAGCGTTGTAATACTAAGAAGTATAATAATTGATAACCATGTATTCCATTCTAAGGCTTCTGCTAGAAACAGAGAGCCAGAGTATAAATTCATGGAAATTTTAGTAAAAATGTACAGCAGTAAAGAAATAACAGCCAAATA]

[+] EMBL CD151659             [GTATAAACAAACGTAAGAATCATTCGAAGAAAACCAATGATTAGTCCGTAAATGAGACCGAAAAAAGCGCCCTTTTCACTACACCGTTTCCATAGTATAGCGCATAAAAATACTGATGCTATAGGAGGTGTAAGGTAGGCAGCAATCGCTTGAATATAGATATACAGTTCACTTCCTTGAGACTGTTGCATTATTGGAATCCATGCAACACTTAGCCCGACTAGTACTGCGATAAACACACAGAAGGCATTAGATCAATCACAAGTTTTGGATATGCCATATTTGAACAACCATTACGATGTCCACAAACTTTAAGGCAATCAGAACCAGGGAAGCAACCAATCTCATTTGGATATAATACGCGGCTTATCATTCCTGGAATAACCATAATAAAAATTGGAATTTGTTTTATTAATCCAGTCATTAATGTTGCACCTTGTGCATGCGATAAACTCTNTGCTGCCAATGTACGCTGAACTATCATTTAATATCGTTAGCACAGTGGCACCAAAGATCATGACGAANAACTGAAGGGTGTCAGTATACAGAACAGCAGCA                                                                                                                                                                 ]
[+] EMBL CD202795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACTCTTTGCTCCCAATGTACGCTGAACCATCATTTAATATCGTTAGCACAGTGGCACCAAAGATCATGACGAAAAACTGAAGGGTGTCAGTATACAGAACAGCAGCAAGTCCACCTGTTACTGTAATAAGCGTTGTAATACTAAGAAGTATAATAATTGATAACCATGTATTCCATTCTAAGGCTTCTGCTAGAAACAGAGAGCCAGAGTATAAATTCATGGAAATTTTAGTAAAAATGTACAGCAGTAAAGAAATAACAGCCAAATA]
[-] EMBL CD118279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTGTAATACTAAGAGGTATAATAATTGATAACCATGTATTCCATTNTAAGGCTTCTGCTAGAAACAGAGAGCCAGAGTATAAATTCACGGAAATTTTAGTAAAAATGTACAGC                       ]




>consensus_4178#0
GTATAAACAAACGTAAGAATCATTCGAAGAAAACCAATGATTAGTCCGTAAATGAGACCG
AAAAAAGCGCCCTTTTCACTACACCGTTTCCATAGTATAGCGCATAAAAATACTGATGCT
ATAGGAGGTGTAAGGTAGGCAGCAATCGCTTGAATATAGATATACAGTTCACTTCCTTGA
GACTGTTGCATTATTGGAATCCATGCAACACTTAGCCCGACTAGTACTGCGATAAACACA
CAGAAGGCATTAGATCAATCACAAGTTTTGGATATGCCATATTTGAACAACCATTACGAT
GTCCACAAACTTTAAGGCAATCAGAACCAGGGAAGCAACCAATCTCATTTGGATATAATA
CGCGGCTTATCATTCCTGGAATAACCATAATAAAAATTGGAATTTGTTTTATTAATCCAG
TCATTAATGTTGCACCTTGTGCATGCGATAAACTCTNTGCTGCCAATGTACGCTGAACTA
TCATTTAATATCGTTAGCACAGTGGCACCAAAGATCATGACGAANAACTGAAGGGTGTCA
GTATACAGAACAGCAGCAAGTCCACCTGTTACTGTAATAAGCGTTGTAATACTAAGAAGT
ATAATAATTGATAACCATGTATTCCATTCTAAGGCTTCTGCTAGAAACAGAGAGCCAGAG
TATAAATTCATGGAAATTTTAGTAAAAATGTACAGCAGTAAAGAAATAACAGCCAAATA

clustalw multiple alignements is not computed in this case